Acropora millepora: 114964795
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Entry
114964795 CDS
T06134
Name
(RefSeq) general transcription factor IIH subunit 4-like isoform X1
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
amil
Acropora millepora
Pathway
amil03022
Basal transcription factors
amil03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114964795
09124 Replication and repair
03420 Nucleotide excision repair
114964795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amil03021
]
114964795
03400 DNA repair and recombination proteins [BR:
amil03400
]
114964795
Transcription machinery [BR:
amil03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114964795
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114964795
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
ANT
Motif
Other DBs
NCBI-GeneID:
114964795
NCBI-ProteinID:
XP_029200049
LinkDB
All DBs
Position
Unknown
AA seq
474 aa
AA seq
DB search
MAANSLSGSSFFRHLQCRDLHQYLGSLASGILDRLYNHPAICLAVFRELPELAKQFVMRT
LFAEQPVPETLVAAWVKSDHQKPYTGAMNRLKSLRIWREASGGVPNRLEMNAIFRSNLKI
ALCGGGNPWIGSGDQPEKDKHARDIPFLDKYSMERWEAVLHFMTGCTATDEKTPVSQDVV
KVLVLSGLMKCETPGSTPVISPAGFQFLLMDTASQVWYFMLQYLETVEVQYRSNGRDMDL
VECLSFLFQISFETLGKDYSTEGMSESQFKFLQHLREFGLVFQRKRKSRRYYPTRLAINL
ASAGIGSSAVTHSDEKGFIVVETNYRLYAYTGSSLQVALVGLFAEIVCRFPNLCVAVLTR
DSVQQALASGISAEQILHFLRTRAHPEMLKKTPVIPPTISDQIRLWELERSRMKFTEGVL
YNQFLSQADFEILRKYAEDLGVLMWANSSKRVIVVSRSGHDDVKRFWKRQKQNT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaactctttatctgggtcttcgttttttcgtcatttgcaatgtagagatctt
caccagtatttaggaagtttggcctcaggaatactagataggttgtataatcacccggca
atatgcttggctgttttcagggagttaccagaacttgcaaaacagtttgtaatgaggacc
ttgtttgcagaacagccagtcccagaaacattggtagcggcatgggttaagagtgatcat
cagaaaccctatacaggagctatgaatagactcaagtctctcaggatttggagagaagca
agtggtggagttccaaaccgacttgagatgaatgcgatattccgcagtaatctcaagatt
gcactttgtggaggaggcaatccttggataggttcaggtgatcaaccagaaaaggacaag
catgcacgagacattcccttccttgataagtacagcatggaaagatgggaggccgttctt
catttcatgactggttgtactgcaactgacgagaagacacccgtcagtcaggatgtcgtc
aaggtgttggttctctcaggtctcatgaaatgtgaaacaccaggtagcacccctgttata
agtccagcaggattccagtttcttttgatggacactgcttcacaagtgtggtactttatg
ctacaataccttgagacagttgaggtacagtaccgctcaaatggacgagacatggatctt
gtggaatgtctttcatttctgttccagattagctttgaaactcttggaaaggactattcc
acagaaggaatgagtgaatcacagtttaaatttcttcagcatctgagagagtttgggctt
gtgtttcaaaggaagcgtaaatcaagaaggtattacccaacaagactggcaatcaattta
gcatcagcaggaataggaagctccgctgtcactcattcagatgagaagggcttcatagtt
gtggaaacgaattatcgcctttatgcttatacaggatcgtctttacaagttgctctggtt
ggattgtttgctgaaatagtctgcagatttcccaacctttgtgttgctgtgttaacaaga
gacagcgttcaacaggccttggcaagtggtatctctgctgagcagattcttcatttcttg
cgtacgcgagcccatccagagatgctaaagaagacccctgtaattccaccaacaataagc
gatcagatccgtctgtgggaactggaaaggagtagaatgaagtttacggaaggtgtacta
tacaatcagtttctctcacaagctgatttcgaaatccttaggaagtacgctgaggatcta
ggtgttctgatgtgggcaaattcatcgaagagagttattgtggtcagccgctcaggtcat
gacgacgtgaaacgcttttggaaaagacagaaacaaaatacgtga
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