Acropora millepora: 114977829
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Entry
114977829 CDS
T06134
Name
(RefSeq) collagen alpha-4(VI) chain-like
KO
K06238
collagen type VI alpha
Organism
amil
Acropora millepora
Pathway
amil04512
ECM-receptor interaction
amil04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114977829
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
114977829
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amil04147
]
114977829
00536 Glycosaminoglycan binding proteins [BR:
amil00536
]
114977829
Exosome [BR:
amil04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114977829
Glycosaminoglycan binding proteins [BR:
amil00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114977829
Hyaluronan
Extracellular matrix or blood plasma proteins
114977829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
VWA_3
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
114977829
NCBI-ProteinID:
XP_029214511
LinkDB
All DBs
Position
Unknown
AA seq
1841 aa
AA seq
DB search
MDIVFLLDSSGNVGEQGYQAQKDFVSLFSSKIDVSIIGSRVGIVSYSLQARLDVRFEDYD
NSAGLRSVLPDLKFLGGSPRIDAAFHMAFVELFTAQDGARPGVPRVMVLLTAGMVSNITD
YETLRFAVEPFKGEGIAVIAVGVGQTADLQRLRVLVDSDEMILAAPSFQGLSDLSVDLTL
LACKAAAVAAAEVRTAAGEYAAPESCTKSADIAFIAQSPDTIGLKNYQIQKDFIKAIAGS
FGIGPNGSRAGVVVSGNDTTVNIKFSDHLNEGDFKKAVDRLPDIGGTGTLDYSLQVVFSQ
LLVAQGGTRPGVSKILIIIAGGRHNETEDSLSIYTTKLRQLGVAVIFIGVGDKVEDKVLT
SILTKGENMFPADSFESLMTKTRQVASAACDSAEFSRCTHPADIAFLVDSSGSLNDEGFN
KQKVFIKAIIERFDISPMDSLIGVVTYSDRASVEIKFSDYEYEEDLIKAIEALRYNGKTT
RIDKAINMATRELMSPRGGRRKKIPGVMVILTDGRQTMDSDTRSLDQAAENLRKIEIKTL
VVGIGELADVRELRKMTTRDEDIFIARTLSALPNVIQPVAARICKAAAPALCAVPLEVVF
LVESSENISPSAFQRVKGFLKDVVRYLLTTASDRQVGVILYNSEATKEIAFGQYTSEFGF
NEAVDELPHEKGQPRIDAALQLAAEMFATSGENRVGAQKVCIVLSNARKSSYRESRLSVK
EAAAPLHKAGIRVITIGETPLADGNQLRSLTEHPEDVIRSSSCDGLEATFSFLFKRICYG
AAYQQCDGIADVIFAVHAPATLRPSDYRKEKEFVKMVARGLDIAPGRSRVGLISYSNFAT
VSAEIGAKMTLDSFQNLVDGLPHEKGKTRIDRALKLATSLFDPSASGAMRPGVPRILILL
TNGKQTEAPDAITLDHAARPLFEADVRILVVGVGQNLDEGELQALALRKDDVFFAPNFDD
LVTLGEEVSKITCQAAKPPICSEPLDVAFLVDSSGSVGAANFEKQKAFLKAAARTFDLEG
GIAQVGSVVYSDVAAVHQSFENCNGTNSVMEAIDDIPYYGRSTRIDRALSLANTAMFSNL
GGCRPDAAKALVLVTDGTQTPAPDAISLERAVTPLKSKKVARLALGIGDKISAGELRKVV
DEDDDVMTVDSYDDLPSSLHLVSKKICASAVMQAIDDIPYYGRSTRIDRALSLANTAMFS
NLGGCRPYAAKALVLVTDGTQTPAPDAVSLERAVTPLKSKKVARLALGIGDKISAAELRK
VVDEDDDVMTVDSYDDLPSSLHLLSKKICASAGKSFAFPKSMQCSKRARAGVIIYGSNAI
TAVRFADASNNEIFNLAVDRMPYLRGQTRIDKALHLAYSELLSKKGGSRKGVAKVIIVLT
DGKQSQVPSRIDIQKAVAPLLSAGIRVFAVGVGKGLAKDELELLVEKKEDAISVPSYDLL
TQHARQLSIASCETSEIDACDNTIDVAFLLDSSGSLTPTEFQQSKDFVATVADSFLKTTV
GSRVGLIQFSIIPKVNAWLSDRLSYLDFRRILSQVRHQGGFTRLDRALSLAAEKFAKEDV
SESHIPKVLIVLTDGVNTDAPDAVAFDTAVAPLHQAGVRVFVVSTGDAKGRENLYLLTQR
EEDLYDVRNYDDLSLQLRRLSQDSCESGALQRCERVMDVSFIVDASQSVGLHNYHKLLEF
VKKLAKALQISQSGSHASLVIFSDTARVQITLDEHDDIREFNKALKEAPYLGKRTRIDKG
LRLASEGVFTSRAGMRPGSRRVAVLLTEGRQTRTFDSIPLRYAVQPLRLKRVDVFAVGIG
NEIRFDELRSATTRDQNVFLVKSFKGLNEIAGDLSEKMCQG
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atggacattgtgttccttttggattcatccggaaatgtcggtgaacaagggtaccaagca
cagaaagattttgtcagtcttttctccagtaaaatagacgtttctatcatcggtagccgc
gtgggaattgtctcttacagtttacaagcacgcttagatgtcagatttgaagattacgac
aattccgccggacttcgctcggtcttacctgatctaaaattcctgggtggaagtccaaga
atagatgcagcatttcatatggcgttcgttgagttgtttaccgctcaagatggagccaga
cctggcgttccccgtgttatggtgcttttaacagctggcatggtatcgaacataaccgat
tacgagaccctcagatttgcagtggaaccttttaaaggggagggcatagctgtgatagcc
gtgggtgttggacagaccgctgacctacagagactacgcgtgttggttgacagcgatgag
atgattttggctgcgccgtcttttcaagggcttagcgacttatccgttgatctaacttta
ctggcatgtaaggctgcagccgtagcagcagcggaagttaggacagcagccggagaatac
gcggctcctgaaagctgcaccaagtcagccgatatagctttcattgcacaatctccggat
accattggtctgaaaaattaccagatacaaaaagacttcatcaaagctatcgctggaagt
tttggcataggcccaaacggaagccgagctggagtagttgtctcgggcaatgatacgaca
gtgaatataaaatttagtgaccacttaaatgaaggtgacttcaaaaaggctgtcgatagg
cttcccgatataggcggcacagggacacttgactactccttgcaggtagtcttttctcaa
ttgcttgttgcacaaggaggaacgcggcctggtgtatccaaaattttgataatcatagca
ggcggaagacacaacgaaactgaagactcgctcagtatttacacgacgaagctgcgccag
ttaggtgtggcagtgatttttattggcgtcggcgacaaggttgaagataaagtacttact
tcgatattgactaaaggcgagaacatgttcccggcggattcattcgagagcttgatgaca
aaaacacggcaggttgcaagtgcagcttgtgatagtgcagaattttctagatgcacacat
cccgctgacatcgctttcctggtagactcctcgggtagcttaaatgatgaaggattcaac
aagcagaaggttttcatcaaagctatcattgaacgattcgatatctctccaatggatagt
cttattggtgtcgtaacctacagcgacagggcctcggtggagataaagttctcggattat
gaatacgaagaagatttaataaaggcgatcgaggctcttcgatacaatggcaagacgact
cggattgacaaggcaataaacatggcaacacgagagctcatgagcccaagaggaggaaga
cgaaaaaagattcccggagttatggtcattttaaccgacggaagacagacaatggactct
gataccagatccctagaccaagctgctgaaaacttaagaaagatagaaataaaaacgtta
gtggtcggaataggagaacttgctgatgtacgagagctgcgaaagatgacgacacgagat
gaggacattttcattgctcgtacactgagtgctttaccgaacgtcatccagccagtagct
gcgcgcatatgcaaagctgcagcccctgctttatgtgctgttcccctggaggttgttttt
ctggtggaatcatcggagaatatttcaccctcggctttccaaagagtcaagggttttctc
aaggatgtggtcaggtatctcctgacgaccgcaagcgaccggcaagttggtgtgatcctt
tataacagtgaggcaacaaaagaaattgcttttggccagtatacctcggagtttggattt
aatgaagcagttgacgagcttccccacgaaaagggacagcccagaattgatgcagctctt
caactcgccgcagaaatgtttgctaccagtggagaaaatcgagttggagcccagaaggtg
tgtattgtgctatcaaatgcaaggaaatcgtcctacagagaatccagactctcagtaaag
gaagctgccgcaccacttcacaaagcaggaatcagagtgataactattggagaaacacca
ttagctgatggcaatcaattgcgatccttgacagaacatccagaagatgttattagatca
agctcttgcgatggcttggaagctacatttagtttccttttcaagcggatctgctacggt
gcagcctatcagcagtgtgatggcatagcagatgtgattttcgctgtccacgctccagcg
accctccgtccttccgattatcgaaaagaaaaagaattcgtaaaaatggtggccagagga
ttagacatcgcacctggaagaagccgtgtagggctcatctcgtacagtaactttgcaaca
gtgagcgccgaaatcggtgccaaaatgaccttggactcgtttcaaaatcttgtggatggc
ctgcctcatgagaaagggaaaacacgaattgacagagccttgaagcttgccacctcactc
tttgatccctctgctagtggagcgatgcgaccaggtgttccaaggattcttatccttcta
acaaatggcaaacagacggaggcaccggatgcaataacacttgatcatgcagcaagaccc
ctttttgaggctgatgtacggatccttgtggtgggcgtcggacagaatttggatgaaggc
gaactgcaagccctagctcttagaaaagacgatgtattttttgcgcctaactttgacgat
ttagtcacgctaggtgaagaagtgtccaagatcacatgtcaagcagctaagcctccgatc
tgctccgagccgctggacgttgcttttctcgttgactcatctggaagcgtgggtgcggcc
aattttgaaaagcagaaggctttccttaaggcagccgccagaacttttgacctggagggt
ggcatagctcaagtgggatctgtggtttacagtgacgtagcggctgtgcatcaatccttt
gagaactgcaatggaactaattcagtcatggaagccatcgatgacattccttattatgga
cgctcaactcgaattgacagagctctttcacttgccaacacggctatgtttagcaattta
ggaggctgccgacctgatgctgcgaaagcacttgtactggtaacagatggcacacaaacg
ccagcaccagacgccatttcgcttgagcgggcagtgacaccccttaaaagcaaaaaggtg
gccagattagctttgggtataggagataagataagtgctggagagcttcgcaaggtggtc
gatgaagatgatgacgtcatgacagttgacagctatgatgatcttccttcttcgttgcat
cttgtgtccaagaaaatatgcgccagcgcagtcatgcaagccatcgatgacattccttat
tatggacgctcaactcgaattgacagagctctttcacttgccaacacggctatgtttagc
aatttaggaggctgccgaccttatgctgcgaaagcacttgtactggtaacagatggcaca
caaacgccagcaccagacgccgtttcgctagagcgagcagtgacaccgcttaaaagcaaa
aaggtggccagattagctttgggtataggagataagataagtgctgcagaacttcgcaag
gtggttgatgaagatgatgacgtcatgacagttgacagctatgatgatcttccctcttcg
ttgcatcttttgtccaagaaaatatgcgccagcgcaggtaaaagttttgcttttccgaaa
tcaatgcaatgctcaaagagggcacgcgctggtgtcattatttatggttccaatgcaatc
acagccgttcgctttgctgatgcttcaaataacgagattttcaatttagcagtcgaccgt
atgccatacttaagaggtcaaacgcggattgataaagccctccatcttgcgtattccgag
ttattatccaaaaaaggtggatcacgcaagggcgtcgcaaaagtgataattgtattgaca
gatggaaaacagtcccaagttccgagtcgcattgacattcaaaaagcagtagcacctctt
ttgtcagcaggcattcgagtttttgctgtcggtgttggaaaaggactggcaaaggatgaa
ttagagcttcttgtcgaaaagaaagaagatgctatatcagttccatcatacgatttactt
acgcagcatgcgcggcagctgtccatcgcttcttgcgagacatcagaaatcgacgcttgt
gataacactatagacgtagcgttcttgctcgactcatctggcagcttaacaccaactgag
tttcaacaaagcaaagatttcgtcgcaacggtagcagactccttcctcaaaaccactgtc
ggaagtcgagtggggctcatccagttcagcattattccgaaggtaaatgcttggctttct
gaccgactttcatacttagacttccgaagaatactcagtcaagttcgtcatcaaggtgga
tttacacgcttagaccgggctctgtctctagcggctgaaaagttcgccaaagaagatgtg
tccgagagccacattcccaaggtgttgattgtgctcacggacggcgtgaacacagacgca
ccagatgccgttgcatttgacacggcagtggcgcctcttcaccaagccggtgtcagagtg
tttgtggtttccactggtgacgcaaagggtcgagagaatttatacctgctgacacagcga
gaggaagatttgtatgatgttaggaattacgacgatttgtcacttcagctgcgcagacta
tcccaggattcttgtgagagtggagctttgcaaagatgtgagcgtgtaatggatgtcagc
ttcatcgttgacgcatcacaaagcgtgggcttacataattaccacaagcttttggaattt
gtcaaaaaactagccaaagcattgcaaatatctcagagtggaagtcatgccagcctcgtc
atttttagcgacactgcaagagttcaaatcaccttagacgaacacgatgacatccgggaa
ttcaataaagcgctgaaagaagccccttatcttggcaaaaggacccggatagacaagggc
ctacgtttggcatcagagggtgtctttaccagcagagctgggatgagaccaggttcgcgc
agagttgcggttttattgacagaaggacgtcagacaagaacgtttgattctattccgctt
cgatacgccgtgcagcctcttcgtctcaagcgcgttgacgtattcgccgttggtattgga
aacgagatccgttttgatgagctgcgttcagcgacgactcgtgatcaaaatgttttccta
gtgaaaagcttcaaaggactcaatgaaatagcaggagatctcagtgaaaagatgtgtcaa
ggttga
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integrated database retrieval system