Advenella mimigardefordensis: MIM_c07610
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Entry
MIM_c07610 CDS
T03016
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MIM_c07610 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amim03400
]
MIM_c07610 (priA)
Enzymes [BR:
amim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MIM_c07610 (priA)
DNA repair and recombination proteins [BR:
amim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MIM_c07610 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
zinc-ribbons_6
AAA_16
T2SSE
AAA_22
AAA_19
AAA_11
zf-IS66
Motif
Other DBs
NCBI-ProteinID:
AHG62862
UniProt:
W0PBK6
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All DBs
Position
854459..856510
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AA seq
683 aa
AA seq
DB search
MQVSWVRVVLDIPRQDAFDYRCEHPVQIGQRVIVPFGSRQLIGVVIELLPAPALDPDQIR
DVEQVLDDLPAFSASWLALAQFASRYYQRSLGEVILPVLPNGLRKPTAYLGKRSAGGPVA
RADRKKRSAPATVVPSPIVLNAQQQQAVQQICESDGYAAYLLHGVTGSGKTEVYLHAALT
FLQRGQQILMLVPEINLTPQLETAVRARFADLVAPEEIAVFHSGLADGERLKAWADAQRG
KLKVLLGTRMAIFAPLDNPGLIIVDEEHDASYKQQEGLRYSARDLAVWRAHQAGIPLILG
SATPSLETWHHALSGRYTRLSLEQRAKTRFLPDIRLVDTRKAKLNQGFEPGVLEAIRTRL
ERGEQSMVFLNRRGYAPVMHCAACGWVSQCPRCSVHTVLHRTPGSGYQLQCHHCGFQSRV
PSICPDCGNQDLQPLGRGTQRVEEFLQDIFPAARIQRIDADSTRLKGSALRLFDEVHTGN
IDILVGTQMVAKGHDFKRLGLVAVLNADSMLFSADFRAPERLFAQLLQVAGRAGRHAEGG
EVLIQTGYPDHTVYQTLLNNDFPAFADDLLAERQDTGLPPFTFQALITAEAKSVQRALAF
LQEIREQAATVLADEGEPDAVCLYDPVPLRILRVAHVERAQLLIESASRPALQRFLQQWL
PQVQAIGQKQRMRYFIEVDPLEI
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
gtgcaagtcagctgggttcgtgtcgttttggatattccccgacaggacgcgttcgactat
cgatgcgagcacccggtgcaaatagggcagcgtgtcattgtgccttttggttcacgacaa
ctcattggcgtcgtcatcgagttactgcccgcgccggcgcttgatccagaccagatccgc
gatgtagagcaggtgctggacgatcttccggcgttttctgcttcctggctggctctggct
cagttcgcctcgcgctactatcagcgttcactgggagaggtgatcctgccggtgctgccc
aacggattgagaaagccgactgcttatctgggtaagcgttctgctggagggccggtggcc
agggccgatagaaaaaagcgcagcgcacccgcaacggttgtaccttccccaatcgtgttg
aacgcccagcagcaacaggctgtgcagcaaatatgcgagtcggacggctatgctgcctat
ctattgcatggcgtaaccggcagcggtaaaacagaggtctacctgcacgcggcacttacg
ttcctgcagcgtggccagcaaattctgatgctggtgccggaaattaatctgactccgcaa
ctggagactgccgtccgggcgcggtttgccgatctggtggctccagaggaaatcgccgta
tttcacagcggtctggccgatggcgagcggctcaaggcctgggcagatgcccagcgtggc
aaactcaaggtgctgctgggtacgcgcatggctatttttgcaccactggataatccaggc
ctgatcattgtggatgaagaacacgatgcttcgtacaagcaacaagagggcttgcgttat
tctgcgcgtgatctggccgtgtggcgcgcacatcaagcgggcatcccgctaatactggga
tcggcaacgccttctctggaaacctggcatcatgcgctgagtggccgctacactcgattg
agcctggagcagcgtgccaaaacccgctttctgcccgatattcgtcttgtcgatacacgc
aaggccaagctgaaccaggggttcgagccgggcgtgctggaggcgatccgcacccggctc
gagcgtggcgagcagtctatggtgtttctgaatcgtcgcggctatgcccccgtcatgcat
tgcgcggcttgcggctgggtcagccagtgtccgcggtgctcggtgcatacggtactgcat
cgtacgccaggcagtggctatcagctgcaatgtcaccactgcggttttcagagccgggtg
ccgtccatctgccccgattgcggcaaccaggacctgcagccgctggggcgtggcacgcaa
agggtagaggagttcctgcaggacatctttcctgcggcacggatccagcgtattgatgcg
gacagcacgcgactgaaggggagtgcactgcggctattcgatgaagtgcacaccggcaat
attgatattctggtgggtacgcaaatggtcgcaaagggccatgacttcaaacgtcttggt
cttgtggccgtgcttaacgccgattccatgctgttttctgctgattttcgtgctccggag
cgcctgtttgcgcaattgctgcaagtggccggccgggcagggcgtcatgcggaaggcggc
gaggtgttgattcaaaccggctatcccgatcatacggtctatcagactctcctgaacaac
gactttccggcctttgccgacgacttgctggctgaacgccaggacaccggcttgccgccc
tttacctttcaggccctgatcaccgcggaagccaaaagcgtacaacgggcgctggcgttt
cttcaggaaatccgggaacaggctgctacggttctggccgacgaaggcgagcccgacgcg
gtatgtctttacgatccggttcccttgaggattctgcgggtcgctcacgttgagcgggcg
caattgctgatagagtcggcatcaaggcccgcgttgcagcgttttctgcagcagtggctg
ccgcaggtgcaagcaatcggacagaagcagcgcatgcgttatttcattgaagtcgaccca
ctggaaatctag
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