Aurantimicrobium minutum: AUMI_12370
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Entry
AUMI_12370 CDS
T05175
Name
(GenBank) Fibronectin type III domain protein
KO
K20276
large repetitive protein
Organism
amin
Aurantimicrobium minutum
Pathway
amin02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amin00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AUMI_12370
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
Cadherin_4
fn3
Motif
Other DBs
NCBI-ProteinID:
BAU98779
UniProt:
A0A173LVA9
LinkDB
All DBs
Position
sequence1:236455..242127
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AA seq
1890 aa
AA seq
DB search
MLKWTASLAALAMLVVGSILATGYQAQRVNLDDGAVWVTNGDKQAIGRANTKVFELNTVL
TTDSAQMDLVQNSSHVFLINDATRSLDIVDQATGDVAESIPLPQDVTYAALAGDNVILHA
PATGDVWVLPAATLSNFDAKTQPANFTVGADSVVAVSSTGYLVGVSASLGTLSTINTTSS
VTPEIQQLDAELTAGKLQITLIGERWAVLDQQTATLYTQGRIIDLSSASFDVGQAVLQQP
STRGVEASGNSITSVSGSSSILVSHTAGLAVINLDSAEIFSSVATAQGRPASAVIHGECA
FAAWSGGTVWSKCGAAEESTDNAESMAGSAELVFRVSDQVIALNDALNGLVWAVQGGVRL
IDNWDTLLEQQALEQQVVQTNNADAPEFAKDPQPPVAVDDDLGARPGRVTSLPVLLNDYD
PNGDALVIDTVTSIPAALGEIFINADRSQVMVRLAPDASGTTQFDYSISDGRGGQASATV
TLNIRPESENSPPVQARPTRTNVATGGQVIVNVLEDWIDPDGDAIFVASATVDAPDSLSY
TPAGRVAFTDSGRGGGGLKQVALEVSDGRATGFGAVQINVRAPGQVPIVADAFAVIAIAG
QPITINPSPHVRGGSGVLSLTGVPAVPGLDIVPDFADFSFSVTASRTGSSYVTYAVTDGD
VTGSGLVRIDVIDPPEVSAQPITAAHAVYVPLQQTRTVDVTATDRDPSGGVLVVTGVTNI
PFDSGIQVEVVDHRILRVTLTKPLDAAVAFGYRISNGVSQSEGTVTVVQTPAPTIAQAPV
AVPDVVAVRVGDVISIPVLANDIHPDGGQLTLAAKLDQDVPSGAGLLFTSGNQLRFLAGS
NPGTYSAVYRVNADNGQWASGTVTISVRAIDQDTNQAPTPRTVTARAMSGQTVRIPIPLV
GIDPDGDSVQFVGLDTNPEKGSIAAVGSDWIEYEASAYATGTDTFSYSVVDALGAQASAS
IRVGIAEPLAGGRNPVAIADTVTARPGYTVYVRALQNDSDPDGRPLTLVSVTPQDDSVSA
EIVGDLVKITAPMTPGRYGLVYEIENDLAGTASNFITVDVQTQAPLSRPVISDAVVSLSD
ILDQTSVDVNVLKGAFFADGPVSSLRPTIVSGYGSTARVISSNTVRVQVQETSQIIPFTV
AHPEDPTVSSTAFIWVPGTDDALPQRKKGVKPLTVVSEQTLRIDINDYVIAALGKTVKLT
DSNTVRATHADGSRLVVNDTTLTYTSKDRYFGPASISFEVTDGDSATSPGAHTATIVLPI
TVTPRENMPPVMLGANIDLEPGQEKTLDLVRVTRYPYVDDQDELEYTVSGDGSGVTATLS
GQTLTLKASDDAVKGKTVSLTVTVKDKVAEGSPGQIIVRIVPSTRPLAIPVTDSIVAKRG
ETQTVDVLANDQATNPFPGQPLKVLAVRGLNNGNIPPGVTVTPSADKSTLTVTVSANADP
SDTTLEYEVADATNDPDRYVWGVINISVQDVPSAPQAPTRAAGFVSGNLTLSWQAPAANN
SPITKYTVESDAGYRKECTSTVCSLDGLPTGQRFRFTVSATNAIGTSLVSSWSEPLSADV
IPAGPAQVNITTAGFDPAHPEGGGINVSWSAVGTPAGGSPVSVYVVTIIEDGTTVRATYE
QPASVTSLPTLWLSPGHSYVARVTAKNNADTDTWNSTTSGSVVAIGAPQPAGGLVATQTG
AQGQTTLSWNPVGPNGASSLTYYVKGGPTSFSDGACPANPASGTQNVGSATSWDDSSTKP
LGTYYYVVYATNGFSCVAQTTSVTITQRIPGAASYLSAECIVDGSGTPGTVCSSSNNGQP
FTLRITSPTVASMQGAITLWQIKVGTTWVDLTSASATEYQLPSTAYFQAGGTGGSGQTVL
IRGCTAAGECGAEGSTSSGTPAPIYIPTQN
NT seq
5673 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaaatggaccgcttctcttgcggcgctagccatgttggttgtcggttcaatcctg
gcaactggataccaagcacagcgcgtcaatctcgatgacggtgctgtgtgggtgaccaac
ggggataaacaagcaatcggtagagccaacacaaaagtgttcgaactcaacaccgtgctc
acgaccgactccgcacaaatggatctggttcaaaacagttcacacgtgttcctcatcaac
gatgcaaccaggtcactggatattgtcgatcaggccaccggtgacgtcgctgaaagcatt
ccacttccgcaagatgtcacctatgccgcgctcgccggagacaacgtcatcttgcatgca
ccagcaaccggagatgtgtgggtgttgcctgcggcaaccctgtcgaatttcgatgcgaaa
actcagccagcaaacttcaccgtcggagcggattctgttgtggcagtttccagcaccggc
taccttgttggggtcagtgcctcgttgggtacgttgtccacaatcaacaccaccagctca
gttaccccagaaatccagcaactcgatgctgagctcaccgcggggaaactccagatcacc
ctgattggggaacgctgggcggtgttggatcaacaaaccgcaaccctttacacccaaggc
cgcattattgacctgagctctgcctctttcgatgtggggcaggcagttttgcaacagccc
agcacacgcggtgtagaagcatcaggaaacagcatcacctcagtttctggttcctcctcg
atactggtttctcacacagcaggcctcgccgttatcaatttagatagcgcagaaatcttc
agctctgttgctacagctcagggccgtcccgcatcggcggtcatccacggtgagtgtgcc
tttgctgcctggtcaggtggaacggtgtggtccaaatgcggtgctgcagaagaatccact
gacaatgcggaatctatggccggcagtgcagagttggtctttcgtgtcagcgaccaggtc
attgccctcaatgatgcgctgaacggactggtctgggctgtccaaggcggggtcaggctg
atcgataactgggatactttgctcgaacagcaagcactagagcaacaggttgttcaaaca
aataatgctgatgccccagagttcgctaaggatccgcaaccaccggttgcagttgatgat
gatttaggtgcgcgcccgggccgagtgacctcgcttccggttttgctcaatgactatgac
cccaacggggatgctctggttattgatactgttacctccattccagcagcgctgggggag
atctttatcaatgcggaccgcagccaagtcatggtgcgcctggcgccagatgcttctgga
accacacagtttgactacagcatctctgatggtcgcggtggacaggcctctgccaccgtc
acactcaacatccgtccagagagcgagaactcaccgcctgttcaagcacgtccaacccga
accaacgtggcaacaggtggccaggttatcgtcaacgtgttggaggactggattgatccc
gacggggatgccatctttgtggcctcggcaaccgtggacgcccccgattccctctcttac
accccagcaggccgcgtagccttcaccgactctggccgcggtggcggtggactcaagcag
gtagccctcgaggtctctgatggccgagccactggctttggtgctgtgcaaatcaatgtt
cgagcaccaggacaagtccccatcgtcgctgatgccttcgctgttattgccatcgctgga
caacccatcaccatcaacccgtcacctcatgtgcgcggtggatctggagtgttgagtctg
acgggtgttcctgcagttccaggattggatattgttcccgactttgctgacttctccttc
tcggtcactgcgtcacggactggttccagttatgtcacctatgccgtcaccgatggagac
gtcaccggttctggattagtgcgtattgacgtgattgacccgccggaagtttctgctcaa
ccgataactgctgcgcatgctgtgtatgttccgttgcaacagacccgcacagtcgatgtc
actgcaaccgaccgtgatccatcaggtggtgttcttgttgtcacgggtgtgaccaatatt
ccttttgattcaggcattcaggttgaagttgtggatcatcgcattcttcgcgtcaccttg
accaaacccctcgatgcggcagtggcattcggataccgcatcagcaacggagtttcacaa
agcgagggcaccgtcacggtggtgcaaacacctgcccccaccatcgcgcaagcgccggtt
gcagtccccgatgttgttgccgtgcgcgttggagatgtcatcagtatccctgttctcgcg
aacgatattcacccggacggcggccagctcaccctggcggccaagctagaccaggatgtt
ccttctggtgctggtctgctctttacctcgggcaatcagttgagattcttagcaggcagc
aaccctggaacctactcggcggtgtatcgagtcaatgcagataatggtcaatgggccagc
ggcacggtaacaatctcagtgcgcgcgatagaccaagacactaaccaggcgcccacccca
cgcaccgtgacagcccgtgccatgtcggggcaaacagtgagaattcctataccgctggtg
ggcattgaccccgatggtgactctgttcaatttgtcggcttagataccaaccccgaaaag
ggctcaattgctgctgtgggcagtgattggattgagtacgaggcatccgcctatgccacc
ggaaccgacacgttcagttactccgttgtcgatgcattgggtgctcaagccagtgcatca
atccgtgtgggtattgcagaacctttggctggtgggcgcaatcctgtcgcgatagccgat
acggtcacggcacgccctggatacaccgtctatgttcgtgcactacaaaacgacagtgat
cctgacggacgtccgctcactcttgtttctgtgaccccacaggatgactctgtttccgca
gagatcgtgggagatctcgtcaagatcactgcaccgatgacaccgggacgctatggcctg
gtctatgagatcgaaaatgatcttgcaggtactgcttccaacttcatcactgttgatgtt
caaacgcaggctccgctctcacgccctgtgatctcggatgctgtggtgagtctgtcagat
attttggatcaaacttcagtagatgtgaacgtgctcaagggagcattcttcgcagatggc
cccgtttcttcactgcggcccacaatcgtgagcggttacggatccactgctcgagttatc
tccagcaacacggttcgtgttcaggttcaagaaacctctcaaatcattcccttcacggtt
gcacatcctgaagaccccaccgtgagctccaccgccttcatttgggttccaggaaccgat
gatgctctgccacagcgcaagaaaggtgtcaaaccactgactgtcgtcagtgaacaaaca
ctgcgcattgacatcaatgactacgtcatcgcagccttaggaaagaccgtcaagctgacc
gatagcaacaccgtgcgtgccacacatgctgacggttcacgcttggtggtcaacgacacc
accctgacgtacaccagtaaagaccgctattttggtccggcctcaatttccttcgaagtc
accgacggcgactcggcaacttccccgggagcacacaccgccaccatcgtgttgccgatt
acagtgacacctcgagaaaatatgccaccggttatgctcggtgccaacattgatttagaa
cctggtcaagagaaaacccttgatctcgtccgtgtcacgagatacccctacgtcgatgat
caggatgaactcgaatacaccgtcagcggagatggctccggcgtcactgccacgcttagt
ggtcaaaccctcactctcaaagcaagcgatgatgccgtcaagggaaaaactgtttccctc
actgtcaccgtcaaagacaaggtggctgagggttcacctggacaaattatcgtcagaatt
gtgccctcaaccagaccccttgccattcctgtcacggacagcattgttgccaagcgtgga
gaaacccaaactgttgatgtcttggctaacgatcaagcaaccaaccccttcccagggcag
ccgctcaaagttcttgccgtgcgaggccttaacaacggcaacattccaccgggtgtaacg
gtgacaccctcagcggataaatccacgctgacggtcaccgtctctgccaacgctgacccc
agcgacaccacgctggaatatgaggttgctgatgccaccaacgatccagaccgctatgtt
tggggtgtcatcaacatttcagttcaagacgttccctccgcgcctcaagcaccaacgcgc
gctgctggatttgtttcaggaaatctcaccctgtcctggcaagcaccggcagccaataat
tctccaataacgaagtacaccgtcgaaagcgatgcgggttatcgcaaagaatgcacctca
accgtctgttcgctcgatggtttgcccaccggacagcgcttccgctttacggtgagtgca
acgaacgccatcggcacctcactggtaagcagctggagtgagccactgagtgccgatgtt
attccggcaggacctgcacaagtcaacatcacaaccgcaggatttgaccccgcgcacccc
gaaggtggtggcatcaacgtttcttggagtgctgtgggaacacccgcaggaggcagcccc
gtcagcgtctatgttgtgaccatcattgaagacggaacaacagttcgagccacctatgaa
cagcctgcaagcgtcacaagcctgcccacgctgtggctatctccaggacactcctatgtt
gctcgcgtaaccgcgaaaaacaatgccgataccgacacttggaactccacaacctctggt
tcagttgttgctatcggtgcaccacaacctgcaggtggattagttgccacacaaacaggc
gcccagggacaaacaactctgagttggaaccccgtaggccctaacggagcgagttcgctc
acctactacgtcaagggaggccccacgagtttcagcgacggagcctgcccagccaaccca
gcaagtggcacacagaatgtgggaagtgcaaccagttgggatgactcctccacgaaacct
ctgggcacctactattacgttgtttacgccaccaacggcttcagttgtgttgcacaaacc
actagcgtcaccatcactcagcgcattccgggagcggcaagctacctcagcgcagaatgt
attgttgacggctcgggaacccccggcaccgtctgtagctcgagcaacaacggccaaccc
ttcacgcttcgcatcacgtcaccaacagtggcatccatgcagggagccatcacactctgg
caaatcaaagtcggaacgacctgggttgatctcacctcagcaagtgcaaccgaataccaa
ttgcccagtactgcgtatttccaagcgggaggaacaggtggttcaggccagactgttctt
attcgcggatgtacagcagcaggggagtgtggtgctgaaggctccacctccagcggcacc
ccagcccccatctacattccaacccagaactaa
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