Aminobacter sp. SS-2016: Amn_28610
Help
Entry
Amn_28610 CDS
T09420
Name
(GenBank) ATP-dependent DNA ligase
Organism
amis
Aminobacter sp. SS-2016
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
LigD_N
DNA_ligase_A_M
DNA_ligase_A_C
DNA_primase_S
RNA_ligase
Motif
Other DBs
NCBI-ProteinID:
BBD37981
LinkDB
All DBs
Position
2984078..2986540
Genome browser
AA seq
820 aa
AA seq
DB search
MAAEKLRTYRQKRDFTRTREPRGVEQAGEGNRFVVHKHHATADHYDLRLELDGVLKSWAV
PRGPSLNPADKRLAVETEDHPLEYIDFEGLIPEGEYGGGPMIVWDGGVWAPMEDARASLD
KGAFKFRLWGEKLKGGWMLARLKPKPGEDKRNWLLFKEHDPAADETTDILEARPESVKSG
RRIEELVVVPRKPPPPKPGDFKPDKLAGAVRAPMPARIEPQLATAAPKPPSGEGWLHEIK
FDGYRTMVHLEGGTARLITRSGIDWTKRYGKLSAAFRDLPCSDAVIDGEIVVLDDKGISR
FAALQDALASGHDELLVFYAFDLLHLNGWGLTGVELGKRKDLLETLLAGHVHAQSALQVS
GHVEGDGQALYDQATLMGLEGVVSKRRSAHYTSGRSHSWTKTKALKRDEFVIAGYTTSEA
AEGLAALALGEWVDGELQYRGKVGTGFDAETLQSLLHRLQGLREGAAKLDGAPKEVIPVR
PVLNARIHYANRTADNALRHAVFKGLREAELSEAPLAPRKRLITDADLAAVTITNPERRM
LGKSGPTKLDIAVYYAAVGDFMLPHIMGRPVSLFRCPTGQHKDCFFQRHAFTGMPATIAR
FETKNSEDETKTYISVEDAKGYLALAQFGVVEFHVWGALRKRLDKPDRVVFDLDPGEGIG
WREVVEAAVHVRDELTKMGLVPFVKTSGGSGIHVVVPTTGKLGWKQFHQASSEISSRIAR
TAPDTFTTVMGKDNRKKRIFIDFHRNARSATAAAPYSLRARTNMPASTPLSWADLESIDA
PADLNYSSLPGLVARSGDPWADISDHAKDLPVEVTAKSKS
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggaaaagcttcgcacctaccggcaaaagcgcgatttcaccaggacgcgcgag
ccacgcggcgtcgaacaggcgggcgagggcaaccgcttcgtcgtgcacaagcaccatgcc
accgccgaccactacgatctgcgcctcgaactcgacggcgtgctcaagagctgggcggtg
ccgcgcgggccgtcgctcaatccggccgacaagaggcttgccgtcgagaccgaggaccat
ccgctcgaatatatcgacttcgaaggcctgatccctgaaggtgaatacggcggtgggccg
atgatcgtctgggacggcggcgtctgggcgccgatggaggacgcccgggcgtcgctcgac
aaaggcgcgttcaagttccggctctggggcgaaaagctcaagggcggctggatgctggcg
cggctgaagccgaagccgggcgaagacaagcgcaactggctgctgttcaaggaacatgac
ccggcggccgacgagacgacggacattctcgaagcgcggccagaaagcgtaaagtctggg
cggcgcatcgaggagctggtcgtggttccgaggaagccgccgccaccgaagcccggcgac
ttcaagcccgacaagctcgcgggggcggtgcgggcgccgatgccggcacggatcgaaccg
cagctggccaccgcagcacccaagccgccgtcgggcgagggttggctgcacgagatcaag
ttcgatggttatcgcaccatggtgcatctggaaggcggaacggcccggctgatcacccgc
agcggcatcgactggacaaagcgttacggcaagctttcggcggcgtttcgcgacctgcca
tgcagcgacgcggtcatcgacggcgagatcgtcgttcttgacgacaagggcatcagccgg
tttgccgccttgcaggacgcgctggccagcgggcacgacgagctcctggtgttctacgcc
ttcgatcttctgcatctcaacggctggggcctgacgggcgtagagcttggcaaacgcaag
gacttgctggagacccttcttgccggccatgtccacgcgcagtcggcgctgcaggtcagc
gggcatgtcgagggcgacggccaggcattgtacgaccaggcaaccctgatgggattggaa
ggcgtggtgtcgaagcgacgctcggcgcattacacatcagggcgctcgcatagctggacc
aagaccaaggcgctgaaacgggacgaattcgtcatcgccggctacaccacatccgaagcc
gcagagggcctcgcggcacttgcgctcggcgaatgggtggacggagagctgcagtatcgc
ggcaaggttggaaccggcttcgacgccgagacgttgcagtcattgctgcaccggctgcaa
ggcctgcgcgagggtgcggcgaagctcgatggcgcgccgaaggaggtcatccctgtgcga
cccgtgctcaatgcccgcatccactacgccaaccgcaccgccgacaatgcgttgcggcat
gcggtgttcaaggggctgcgcgaggccgagctgtcggaggcgcccctggccccgcgcaag
cggctgatcaccgacgccgaccttgcagccgtcaccatcaccaatccggagcgccgaatg
ctcggcaagtcagggccgaccaagctcgacattgccgtctattacgccgccgtcggcgat
ttcatgctgccgcacatcatggggcggccggtgtcgctgttcaggtgcccaaccggccag
cacaaggactgcttcttccagcgccacgccttcaccggcatgccggcaaccatcgcgcgg
ttcgagaccaagaactccgaggacgagacaaaaacctacatttcggtcgaggacgccaag
ggctacctcgcgctggcgcagttcggcgtcgtcgagtttcatgtctggggtgcattgcgc
aagcgcctggacaagcccgatcgggtcgtcttcgatctcgatccgggcgaggggatcggc
tggcgcgaggtggtcgaggcggccgtgcatgtccgcgacgagctgacgaagatggggctg
gtgccgttcgtgaagacctcgggcggcagcggcatccacgtcgtcgtgccgacgacaggc
aagctcggctggaagcagttccatcaggcaagcagcgaaatctcgtcgcggatagccagg
accgcgcccgacactttcaccaccgtgatgggcaaggacaaccgcaagaagcgcatcttc
atcgacttccaccgcaacgcgcgcagcgcgaccgccgctgcgccctacagtcttcgcgcc
cgcaccaacatgccggcgtcgactccattgagctgggccgatctcgagtccatcgacgct
ccagcggatttgaactattcttcgcttcccggacttgtggcaaggtcgggcgatccttgg
gcagacatatcagatcatgccaaggacttgccggtcgaggtcactgccaagagtaagtct
tga
DBGET
integrated database retrieval system
