Aminobacter sp. SS-2016: Amn_52300
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Entry
Amn_52300 CDS
T09420
Name
(GenBank) isopropylmalate isomerase
KO
K01703
3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:
4.2.1.33
4.2.1.35
]
Organism
amis
Aminobacter sp. SS-2016
Pathway
amis00290
Valine, leucine and isoleucine biosynthesis
amis00660
C5-Branched dibasic acid metabolism
amis01100
Metabolic pathways
amis01110
Biosynthesis of secondary metabolites
amis01210
2-Oxocarboxylic acid metabolism
amis01230
Biosynthesis of amino acids
Module
amis_M00432
Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate
Brite
KEGG Orthology (KO) [BR:
amis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00660 C5-Branched dibasic acid metabolism
Amn_52300
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
Amn_52300
Enzymes [BR:
amis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.33 3-isopropylmalate dehydratase
Amn_52300
4.2.1.35 (R)-2-methylmalate dehydratase
Amn_52300
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Gene cluster
GFIT
Motif
Pfam:
Aconitase
AcnX
Motif
Other DBs
NCBI-ProteinID:
BBD40350
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All DBs
Position
complement(5409483..5410892)
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AA seq
469 aa
AA seq
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MSAPRTLYDKIFDDHVVDRQEDGTCLLYIDRHLVHEVTSPQAFEGLRMTGRKVRHPEKTL
AVVDHNVPTSPDRKNGIKNEESRIQVEALAKNSADFGVEYYSENDKRQGIVHIVGPEQGF
TLPGMTIVCGDSHTSTHGAFGALAHGIGTSEVEHVLATQTLIQKKAKNMLVRVDGQLPEG
VTAKDIVLAIIGEIGTAGGTGYVIEYAGEAIRALSMEGRMTICNMSIEGGARAGLIAPDE
KTYAYVKDKPRAPKGKAFEMALDYWKTLHSDEGAHFDKVIVLDAAKLPPIVTWGSSPEDV
VAVTGVVPDAEAIEDETKRNSKKRALDYMGLTAGTKITDISVDRVFIGSCTNGRIEDLRA
VAKVVEGRKVASTVSAMIVPGSGLVKEQAEAEGLDKIFVAAGFDWREPGCSMCLAMNDDR
LKPHERCASTSNRNFEGRQGFKGRTHLVSPAMAAAAAIAGHFVDIRDWH
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaccgcgtaccctctacgacaagatctttgacgaccacgtcgtcgaccgccag
gaagacggcacctgcctgctctacatcgaccgtcacctcgtgcacgaagtgacgagcccg
caggccttcgaaggcctgcgtatgaccggccgcaaggtccgtcatcccgagaagacgctc
gccgtggtcgaccacaacgtgccgacctcgccggaccgcaagaacggcatcaagaacgag
gaaagccgcatccaggtcgaggcgctggccaagaactcggccgatttcggcgtcgagtat
tactccgaaaacgacaagcgccagggcatcgtccatatcgtcggccccgagcagggcttc
accctgccgggcatgaccatcgtctgcggcgacagccacacctcgacgcatggtgctttt
ggtgcattggcgcacggcatcggcacctcggaagtggaacacgtcctggcgacccagacg
ctgatccagaagaaggccaagaacatgctggtacgtgtcgacggccaactgccggaaggc
gtgaccgccaaggacatcgtgcttgccatcatcggcgagatcggcaccgccggcggcacc
ggctacgtcatcgaatatgctggcgaggcgatccgtgccctgtcgatggaaggccgcatg
acgatctgcaacatgtcgatcgaaggcggcgcccgcgccggcctgatcgcgcccgacgag
aagacctacgcctacgtcaaggacaagccgcgcgcgccgaagggcaaggccttcgagatg
gcgctcgactactggaagacgctgcattcggacgaaggtgcgcatttcgacaaggtcatc
gtgctcgacgcagccaagctgccgccgatcgttacctggggctcgtcgcccgaggacgtg
gtcgccgtcaccggcgtggtgccggatgccgaggcgatcgaggacgagaccaagcgcaac
tccaagaagcgcgcgctcgactatatgggcctgaccgccggcaccaagatcaccgacatt
tcggtcgaccgcgtcttcatcggctcttgcaccaatggccgcatcgaagatttgcgcgcc
gtcgccaaggtcgtcgagggccgcaaggtcgcctcgactgtcagcgcgatgatcgtgccg
ggctcgggcctggtcaaggaacaggcggaagccgaaggcctcgacaagatcttcgtggcg
gctggcttcgactggcgcgagccgggctgctcgatgtgcctggccatgaatgacgaccgc
ctcaagccgcatgagcgctgcgcctcgacctcgaaccgcaacttcgagggccgccagggc
ttcaagggccgcacccatctggtgtcgccggccatggctgcggccgctgccatcgccggc
cacttcgtcgacatccgcgactggcactga
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