Alligator mississippiensis (American alligator): 102557871
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Entry
102557871 CDS
T03087
Symbol
TCF20
Name
(RefSeq) transcription factor 20
KO
K24769
transcription factor 20
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102557871 (TCF20)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
102557871 (TCF20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
102557871
NCBI-ProteinID:
XP_019336370
LinkDB
All DBs
Position
Un
AA seq
1948 aa
AA seq
DB search
MQSFREQSSYHGNQQSYPQEVHGTSRLEEFSPRQQAQMFQSFGGGAGSGRRGAAGTSAAM
PGETSGHQSYQGFRKEAGEFYYMASNKDPVAAGGQQPPQRRPSGPVQSYGPPQGSSFGSQ
YGSEGHVGQFQTQHSTLGGVSHYQQDYTGPFSPGSTQYQQQASSQQQQVQQLRQQIYQSH
QPLPQASSQPVSSASHLQPMQRPSALPSSASGYQLRVGQFSQHYQPPASSSSSFPSPQRF
GQSGQNYDGSYSVNSGSQYEGHTVGSSAQAYGTQSNFNFQSQPIKSFEQSKMPQGGQQGQ
QQQHPSQHVMQYSNAATKLSLQSQVGQYSQSEVPVRSPMQFHQNFSPISNPSPAASVVQS
PSCSSTPSPLMSGGDNLQCGQGNMSMGSRNRILQMMPQLSPTPSMMPSPSAQAGGFKGFG
LEGLQEKRLTDPGLSSLSALSSQVANLPNTVQHMLLSDALAPQKKGSKRSSSSKKADSCT
NSEGSSQAEEQLKSPLAESLDGGCSSSSEDHGERVRQLSGQSTSSDTTYKGGNVERSNSS
PAQGSQTEPPKLSTSPVAREDVSSPDGKETLVAAEAAPKVNEKGVGVIVSREAMTGRVEK
SGGQDKPTQDDVSTATQAAPGSSGLKETGQVMPQPESQGGSKGSKSGDNNTNHNGEGSSQ
ASHTILGSSFPGRTEPSKSPGSLRYSYKDNLGTGMQRNIGGFPQYPLSQEKGDFPGHSER
KGRNEKFPSLLQEVLQGYHHHPDRRYARNAQEHPGMAGSLEGAMRPNVLISQANELTNRS
LLNKTMGSLLESPHWGPWDRKSSGTAPEMKQINLADYPIPRKFEVESQSSVHEGGALSER
RSVICDISPLRQLVRDPGPHPIGHMGPEARSGRGERLTPGLGQSVILPGGLVSMETKLKS
HSGQIKEEDFEQSKTSVSLNSKKSGDHCHPPGIKHESFRGNASPGAAVSDVSSDYISQQE
SRSTQMRRAPGRIGSGREGMRGKSPSQFQDLADKLKMSPGRSRGPGTDLHHMNPHMTLAE
RVSRGSLHSPFAQNSEGPSLASAYHANARAHAFGDPSQSLNSQYHYKRQIYQQQQDEYKE
WSSSAAQGVIAAAQHRQEGARKSPRQQQFLDRVRSPLKNDKDGMMYIQASSYLDAGGQET
GRCVMGSDGAQNKCTELKHGNQKMQQQESGWDLSRQTSPAKSSGPLGAANQKRFCPDGDG
HRREESTDLPKPSNAMMRLPGQEDQSPQNPLIMRRRVRSFISPIPSKRQSQDAKNSGTDD
KGRLLPSSKEGTDKAFNSYAHSSQGQDAGKSLSKGDPSKDLPIPDNRNCPGVSLTNPAKT
KILPPRKGRGLKLEAIVQKITSPNIRRSVSSNSAETGADAVTLDDILSLKSGPEGGSVTS
HGSETEKRKGETASDQMGTVGQEMVGEMSLSRPEEWHGSEDDKVKKETSEVASVSKEGSG
TTVGPPSLQKSGIQGRSDASISGAGTLTFSDSKTVSPSNVFTSELNPKSEEKDGDVTNIS
PKPDGFPPKGYFPSGKKKGRPIGSVNKQKKQQQQQQQQQQQQPLQPPPPPQPPSQSSEGA
GGGEPKPKRQRRERRKPAAQPRKRKTRRAAPIVEPQEPEIKLKYATQSVDKTDNKNKSFF
PYIHVVNKCELGAVCTIINAEEEEQNKLVRGRKGQRSSTPPPSNTESKVLPTSTFMLQGP
VVTESSVLGHLVCCLCGKWASYRNMGDLFGPFYPQDYAATLPKNPPPKRATEMQSKVKVR
HKSASNGSKTDTEEEEEQQQQKEQRSLAAHPRFKRRHRSEDCGGASRSLSRGASCKKATT
EGVSGSEKTPLDSKPLMPTSEGGSELELQIPELPLDSNEFWVHEGCILWANGIYLVCGRL
YGLQEAVEIAREMKCSHCQEPGATLGCYNKGCSFRYHYPCAIDADCLLNEENFSVRCPKH
KPLPPCSLPSLQNKMVKGSLSTEQSERG
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcctttcgggagcaaagcagttaccacggaaaccagcagagctacccacaggaa
gtgcacggcacatcccggcttgaagaattcagccctcgccagcaggcccagatgttccag
agctttggaggaggtgctggcagtggacggcgtggagcagcggggacctctgcagcaatg
cctggtgagacctctggtcatcagagctaccaaggtttcaggaaagaagcaggagaattt
tactacatggcttccaacaaagatcctgtggcagcaggaggacagcaaccacctcagcgc
aggccatctgggccagtgcagagctatggaccaccacaagggagcagctttgggagccag
tatggaagcgaggggcatgtgggccagtttcaaacgcagcactcaacccttgggggtgtc
tctcactatcagcaggactatactggacctttctctccagggagtacccaatatcagcaa
caagcttctagccagcagcagcaagtacagcaactgagacagcaaatctatcaatcccat
cagcccttaccacaggcatctagccaacctgtatctagcgcctcccatttgcagccaatg
cagcgtccatctgccttgccttcctctgcttctggataccagttacgagtgggtcagttc
agtcaacactatcaaccccctgcttcttcctcctcctcttttccttccccccagcgtttt
ggccagtcgggacagaattatgatggcagttacagtgtgaattctggttcacagtatgaa
ggccacactgtgggttccagtgcacaagcttatggaacccaatctaattttaactttcag
tctcagccaattaagagttttgagcaatctaagatgccccaaggtggacagcaggggcag
cagcaacagcatccctcacagcatgtaatgcagtactcaaatgccgctaccaagctttca
cttcaaagtcaagtgggacagtatagccaatctgaagtccctgtgaggtcaccgatgcaa
ttccatcagaacttcagtcctatttccaacccgtctccagctgcctctgtagttcagtct
ccaagctgcagctccactccatctcctctcatgtcaggtggagataatcttcagtgtggg
caaggcaacatgtccatgggctctagaaatcgaattttgcagatgatgcctcagctcagc
ccaacaccatccatgatgccgagccccagtgctcaagctgggggcttcaagggatttggg
ttggaagggttgcaggagaagaggcttacagatccaggtctgagcagcctaagtgctcta
agctctcaagttgctaatcttcccaacacagtccagcacatgttgctttcagatgccttg
gcacctcagaaaaaaggttccaaaagatcatcatcttctaaaaaggctgacagctgcaca
aactcagaaggctcctcccaggcagaagagcagctcaagtctcctctggcagaatctctt
gatggtggctgctccagcagttcagaggatcatggagagagagtgaggcagctgagtggc
cagagcactagttcagacaccacttacaaagggggcaatgtagagagatccaactcctca
ccagcacaaggctctcaaactgagccaccaaaactcagtactagccctgtagctagggaa
gatgtgtcctccccggatggaaaggaaaccttggtagcagcagaggctgccccaaaagtg
aatgaaaagggagttggggtgattgtctcccgggaggccatgacaggcagagtagaaaag
tcaggtgggcaggataaacccacacaagatgatgtttccacagctacccaagcagctcct
gggtccagtggattgaaagaaactgggcaagtgatgccacaaccagagtctcaaggaggg
agcaaagggagtaaaagtggggataacaacactaaccacaatggagagggtagcagccag
gctagtcatacaatcctggggtcaagttttcctggtagaacagaaccttccaaatctcct
ggcagtttaagatacagctataaggataatctaggcactggcatgcagagaaatattggt
ggctttcctcagtatcctttgagccaagaaaaaggggattttccagggcatagtgagcga
aaggggcggaatgagaaatttcccagtctcctacaggaagttttgcaggggtatcaccat
cacccagatagaagatatgctaggaatgctcaggagcatccagggatggctggaagcttg
gaaggagccatgaggcccaacgttctaattagccaagccaatgaattaaccaacagaagc
cttctaaacaaaaccatgggatcgctcctggaaagcccccactggggcccctgggatagg
aaatcaagtggcacagctcctgagatgaaacagatcaatctggctgactatcctattcct
agaaagtttgaggtggagtcacagtcttctgtccatgaaggaggagcactgtcagagagg
aggtctgttatctgtgatatatctccactaagacaactggttagggaccctgggcctcac
ccaattgggcacatgggtcctgaggccagaagtggaagaggtgagcggctcactcctggt
ttaggccagtcagtcatactccctggtggcctggtatccatggaaacaaagttgaagtct
catagtgggcaaataaaagaggaagattttgagcagtcaaagacctcagtcagtctcaac
agcaagaaatctggtgatcactgtcatcctcccggcatcaaacatgaatctttccgaggc
aatgccagccctggagctgcagtctctgatgttagttcagactacatctcccagcaagag
agcaggtcaacacaaatgaggcgagcccctggcagaattggaagcggcagggaaggtatg
aggggaaaatcgccttcacagtttcaggatctggctgataaactgaaaatgtcaccaggc
agaagcagaggcccaggaacagatctccaccacatgaaccctcacatgacactggctgag
agggtcagcaggggttctttacactctccgttcgctcagaactctgaaggtccatctttg
gcttcggcatatcatgcaaacgctagggctcatgcttttggtgaccccagccagagtttg
aattcccagtatcattacaaaaggcagatataccagcaacagcaagatgaatacaaagag
tggagcagcagcgctgctcagggtgtgattgctgcagctcagcatagacaagaaggggca
aggaagagcccaaggcaacagcagttccttgaccgagtaagaagtccgttgaaaaatgac
aaggatggaatgatgtacatccaggccagctcttaccttgatgctggaggtcaagaaact
gggcgctgtgtcatgggcagtgatggtgctcaaaacaagtgcaccgaattaaaacatggt
aaccagaagatgcagcaacaggaatctggttgggatctgtcccggcagacctctccagcc
aagagcagtggtcctctaggagcagccaatcaaaaaaggttttgccctgatggtgatggg
cacaggcgagaagaatctacagatttgccgaagccgagtaatgccatgatgaggctccct
ggccaagaagatcagtctcctcaaaatcctttaattatgaggagaagggtccgttctttc
atctctcctattcctagcaaaaggcagtcacaggatgcaaagaatagtggtacagacgat
aaggggcgactgcttccttcatcaaaggaaggaactgacaaagcattcaactcttatgcc
cactcatctcaaggccaagatgctgggaagtcactgtcaaagggagatccttccaaagat
cttcctattcctgacaacaggaattgccctggtgtttctcttacaaatccggctaagacc
aaaatattgcctccacggaaggggcggggattaaaactggaagctattgttcaaaaaatt
acatcccccaacatcaggagaagtgtttcctccaacagtgctgaaaccggtgcagatgct
gtcactcttgatgacatcctttccctcaagagtggacctgaaggtggcagtgtgacaagt
catggatcagaaactgagaagagaaaaggagagactgcatcagatcaaatggggacagtg
ggccaagaaatggtgggtgaaatgtctctatcaagaccagaagagtggcatggcagtgaa
gatgataaggtcaaaaaggagacatctgaagtagctagtgttagtaaagaaggatcaggg
actactgtgggcccaccatctttgcagaagtctggtatacaaggaagatctgatgcttct
ataagtggagctggaactctgaccttttctgactcaaaaacagtctctccttctaatgtg
tttacttctgaattgaacccaaaatctgaagaaaaagacggagatgttacaaacatttcg
cccaagccagatggcttccctccaaagggatattttccctctggaaagaaaaaggggagg
cccattggtagcgtgaacaagcagaagaagcagcagcaacagcagcagcaacagcaacaa
cagcagccgctgcagccgcctccaccaccacagccaccatcccagtcatcagaaggtgca
ggtggtggagagccaaaacctaagagacaaaggagggagaggaggaaacctgcagcacag
ccaagaaaaaggaaaactagacgggccgctcccattgtggagcctcaagaaccagagatc
aagctgaaatatgccacccaatctgtagataaaactgacaacaagaacaagtcatttttc
ccttatattcacgtggtaaacaagtgtgaattaggtgcagtgtgcacaatcattaatgct
gaagaagaggagcagaacaagttggtgaggggtcgaaaggggcagaggtcctcaactccc
cctcctagcaacactgagagcaaagtgctgcccacctcgactttcatgctgcagggccca
gtagtaacagagtcttctgttttggggcatctggtttgctgcttgtgtggcaagtgggcc
agctatcgcaacatgggtgacctctttgggcctttctatccccaggattatgccgctaca
ctgcccaaaaacccacctcccaagagggccacagaaatgcagagcaaggtcaaggtacgg
cacaaaagtgcttctaatggttccaagaccgatacagaagaggaagaagaacaacaacaa
cagaaggaacaaagaagcctggctgcccatccccgctttaagaggcggcaccgctctgag
gactgtggtggggcctctcggtcactttcaaggggagcttcttgtaaaaaagcaaccact
gagggtgtcagtggcagtgaaaagactcctttggactcaaaacccctgatgcccacttca
gaaggtggctctgagctggagttacaaattcctgaactacctcttgacagcaatgaattt
tgggtccacgagggttgtattctctgggccaatgggatctacctggtctgcggcaggctg
tatgggctgcaggaagctgtggaaatagcgagagagatgaaatgttcccattgccaggag
ccaggagccaccttaggctgctacaacaaaggctgctctttccgataccattacccatgt
gccatcgatgcagattgtttactaaacgaagagaacttctcagtgaggtgcccgaagcac
aagcccctccctccttgctctcttccctccttgcagaacaagatggtgaaaggcagtctc
agcacagagcagtcggagcgggggtga
DBGET
integrated database retrieval system
