Alligator mississippiensis (American alligator): 102558581
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Entry
102558581 CDS
T03087
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein, fox-1 homolog 1
KO
K14946
RNA binding protein fox-1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102558581 (RBFOX1)
Spliceosome [BR:
amj03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
102558581 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
102558581
NCBI-ProteinID:
XP_014454419
LinkDB
All DBs
Position
Un
AA seq
418 aa
AA seq
DB search
MLSSQGVLLHPYGVPMILPAAPYFAGLVQGNQEATAPPDTMAQPYASAQFAPPQNGIPAE
YTAPHPHPAPDYTGQTTVPEHTLNMYPPAQTHSEQSAADTNAQTVSGTATQTDDAAQTDG
QQQTQSSENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGF
VTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYS
PEFYAGRVLLCQANQEGSPVYSAPSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGRTVY
NTFRAAAPPPPIPAYGGVVFQEPVYGNKLPQGGYAAYRYAQPATATAAAYSDSYGRVYAA
DPYHHTLAPAATYGVGAVNAFAPLTDAKTRSHADDVGLVLSSLQASIYRGGYSRFAPY
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgttgtcgtctcaaggagttttgctacatccgtatggagtgcccatgattctgccggca
gcaccatacttcgctggacttgttcagggtaatcaggaagctacagcacctcctgacaca
atggcgcagccttatgcctcagcccagtttgctccacctcagaatggtatccctgcagaa
tacacagccccacacccgcatcccgctccagactacacaggccagaccactgttccagag
cacacgttaaacatgtaccctcctgctcagacacattctgaacagagtgcagctgacaca
aatgcacaaactgtctccggcacagctacacagacagacgatgcagcacagactgacggc
cagcaacagacacaatcctctgaaaacacagaaaacaaatcacagccaaaacggctgcat
gtctcaaatatacccttcagattccgggatccagatctcagacagatgtttgggcaattt
ggtaaaatcttagatgttgaaattatttttaatgagagaggctcaaagggatttggtttc
gtaactttcgaaaatagtgctgatgcggacagggcgagggagaaattacacggcaccgtg
gtagagggccgtaaaatcgaggtaaataacgcgacagcacgtgtaatgacaaataaaaag
acagtcaacccttatacgaatggctggaaattaaatccagttgttggtgccgtttatagt
ccagaattctatgcaggcagggtgctgctgtgccaggcaaaccaggagggatctcccgtg
tacagtgcccccagttcactagtatacacatccacaatgccaggattcccttaccctgct
gcaactgcagctgctgcttacagaggtgcacatctaagaggccgaggtcgcacagtgtac
aacacatttcgtgcagcagccccccctcctccaattccagcctatggcggagtagtgttt
caagagcctgtgtatggcaataagttaccacagggtggttatgctgcctaccggtatgcc
cagcctgccactgccactgcagctgcctacagtgacagttacggacgagtttatgctgca
gacccctaccaccacacacttgctccagcagccacctacggcgttggtgccgtgaatgct
tttgcacccttgactgatgccaagactaggagccatgctgatgatgtcggtctcgttctt
tcttcattacaggctagtatataccgagggggatacagccgttttgctccatactaa
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