Alligator mississippiensis (American alligator): 102558824
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Entry
102558824 CDS
T03087
Symbol
CXXC1
Name
(RefSeq) CXXC finger protein 1
KO
K14960
COMPASS component SPP1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amj03000
]
102558824 (CXXC1)
03036 Chromosome and associated proteins [BR:
amj03036
]
102558824 (CXXC1)
Transcription factors [BR:
amj03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
102558824 (CXXC1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
102558824 (CXXC1)
COMPASS/SET1 complex (yeast)
102558824 (CXXC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CpG_bind_C
zf-CXXC
PHD
PHD_5
ASH2L-like_WH
LYRM2-like
Motif
Other DBs
NCBI-GeneID:
102558824
NCBI-ProteinID:
XP_006278662
LinkDB
All DBs
Position
Un
AA seq
643 aa
AA seq
DB search
MFEEGRGATRRWVMISGGVRGRQDDPEAEVPRKSEILSSPLVLLVPRKTRDPQRPAMDSE
FSDAEPAGASEETRSENGENAPVYCICRKPDINCFMIGCDNCNEWFHGDCINITEKMAKA
IREWYCLQCREKDPSLEIRYRHKKSKEKERDHERDRPDKDDLRKKAQELGIDQARGSKQQ
IKRSARMCGECEACRRPEDCGHCDFCRDMKKFGGPNKIRQKCRLRQCQLRARESYKYFPA
SLLRGRDDNLHLLKEQLEAATTPEPLSDEELPIDPELYQELCAGAFDDHGLPWLSDPEDA
PFLDPVLRKRAVKVKHVKRREKKSEKKKEEKYKRHKQKQKHRDRARHLERPDTKDPAALA
QCLGPGCVQPARPASKYCSDQCGMKLAANRIYEILPQRIQQWQQSPCVAEEHGKKLLERI
RREQQGARLRLQDMERRFHELEAVIARAKQQAIKEDEESNEGDSEDTDLQIFCVSCGHPI
NPKVALRHMERCYAKYESQTSFGSMYPTRIEGATRLFCDVYNPQSKTYCKRLQVLCPEHS
RDPKVPADEVCGCPLVRDVFELTGDFCRVPKRKCNRHYCWEKLRRAEVDLERVRVWYKLD
ELFEQERNVRAAMTNRAGLLALMLHQTIQHDPLTTDLRSAARR
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagagggcagaggagcgactaggcgctgggtgatgatcagtggaggggttcga
ggcaggcaggatgacccggaagcggaagtaccgcggaagtcagagattctttcgagtccc
cttgttttgttggttcctcgcaaaacaagggaccctcagcggccagctatggacagcgag
ttctcggacgcggagccggccggggcgagcgaggagacgcgctcggaaaatggggagaac
gcgccggtttactgcatctgccgcaagcccgacatcaactgcttcatgattgggtgtgac
aactgcaatgagtggttccatggtgactgcatcaatatcacggagaagatggccaaggcc
attcgggagtggtactgcctacagtgccgtgagaaggatccatcactggagatccggtac
cgtcacaagaagtcaaaggagaaggagagggaccatgagcgtgaccgacctgataaggat
gatctgcgtaagaaggcccaggagctgggcatagaccaggcccgtggatccaagcagcaa
atcaagcggtcagcccgcatgtgcggggaatgcgaggcctgccggcgccccgaagattgt
ggccactgtgacttctgccgtgacatgaagaagtttgggggccccaacaagatccgccaa
aagtgccgactgcgccagtgccagttgcgtgcccgggaatcttacaagtactttccagca
tcgctactgcggggccgggacgacaacctgcacctgctgaaggagcagctggaggcggcc
accacccctgagccactgtcagacgaggagctgcccattgaccctgagctgtaccaggag
ctgtgtgccggtgccttcgatgaccatggtctgccatggctgagcgaccctgaggatgcc
cccttcttagaccctgtcctgcgcaaacgagcagtgaaggtcaagcatgtcaagcggcgg
gagaagaagtcggagaaaaagaaggaggagaagtacaagcggcacaagcagaagcaaaag
caccgggaccgggcacggcacctggaacgtccggacaccaaagacccagctgcccttgct
cagtgcttggggcctggctgtgtccagcctgcccggcctgcctccaagtactgctctgac
cagtgtggcatgaagctagctgccaaccgaatctatgagatcttgccgcagcgcatccag
cagtggcagcagagcccatgcgtggctgaggagcacggcaagaagctgctggagcgcatc
cggcgggagcagcagggcgcccggctgcggttgcaggatatggagcgccgcttccatgag
ctggaggctgtcattgctcgggctaagcagcaggctatcaaggaggatgaggagagcaac
gagggggacagtgaggacacggacctgcagatcttttgcgtctcctgtgggcaccccatc
aaccccaaggtggctctgcgtcacatggagcggtgctatgccaagtatgagagccagacg
tcctttggatccatgtaccccacccgcatcgagggggccacccgcctgttctgtgacgtc
tacaacccccaaagcaagacgtactgcaagcggctgcaggtgttgtgtcccgagcactcc
cgtgaccccaaggtgcccgcggacgaggtgtgcgggtgcccactggtgcgggacgtcttc
gagctgacaggcgatttctgccgtgtgcccaagcgcaagtgcaaccggcactactgctgg
gagaagctgcggcgcgcagaagttgacctggagcgtgtccgtgtgtggtacaagttggac
gagctgtttgagcaggagcgcaatgtgcgggcagccatgacgaaccgggcagggctgctg
gcactcatgctgcaccagaccatccagcatgacccgctcaccactgacctgcgcagtgct
gcccgccgctga
DBGET
integrated database retrieval system
