Alligator mississippiensis (American alligator): 102558841
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Entry
102558841 CDS
T03087
Symbol
DDX46
Name
(RefSeq) DEAD-box helicase 46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102558841 (DDX46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102558841 (DDX46)
Enzymes [BR:
amj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
102558841 (DDX46)
Spliceosome [BR:
amj03041
]
Complex A
U2 snRNP components
U2 related factors
102558841 (DDX46)
Complex B
102558841 (DDX46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
102558841
NCBI-ProteinID:
XP_006262231
UniProt:
A0A151M711
LinkDB
All DBs
Position
Un
AA seq
1038 aa
AA seq
DB search
MGRESRHYRKRSASRGRSGSRSRSRSPSDKRAKRGEDRRSRSRDRERRRERSRSRDKRRS
RSRERKRPRRSRSRERERSRERRRTRSRDRRRSRSRSRGRRSRSPSPGKNKKTENRSRSK
EKTEGVEVSKEKKKEKEDKEEEKDKEVNNFDQNKLEEEMRKRKERVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEEETAEGEKEGMEVEDEELDPLDAYMEEVKEEVKK
FNMRSVKGGGGSEKKSGPTVTKVVTVVTTKKAAVESEKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMTPEEVNVYRLEMEGIT
VKGKGCPKPIKTWVQCGISMKILNSLKKHGYEKPTPIQAQAIPAIMNGRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIVDNIRPDRQTVMFSATFPRAMEALARRILNKPIEVQVGGRSVVCSDVEQHVIVIE
EENKFLKLLELLGHYQEKGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI
INDFKNGACKLLVATSVAARGLDVKQLMLVVNYSCPNHYEDYVHRAGRTGRAGNKGFAYT
FITEDQARYAGDIIKALELSGNPVPAELEKLWGDFKDQQKAEGKIIKKSSGFSGKGFKFD
ETEQALANERKKLQKAALGLQDSDDEDTAVDIDEQIESMFNSKKRVKDMAAPGTSNAPTP
TAGNAEKLEIAKRLALRINAQKNLGAEAQVFVPFHFKDVMQQATNAILRGGTIQAPTVSA
KTIAEQLAEKINAKLNYVPIEKQEEEKQEGGQNESFKRYEEELEINDFPQTARWKVTSKE
ALQRISEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEEL
IRLQNSYQPTNKGRYKVL
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgggccgcgagtccaggcactatcggaagcgctctgcttcacggggacgttctggcagc
cgctccaggagtcgttctccatccgacaaaagagcaaaacgcggagaagacagacgttct
agaagcagagatcgagaacgtcggcgtgagaggtcacgcagcagggacaagaggagatca
aggtcacgggagaggaagcgcccaagacggtccagaagcagagagcgagaacggagcaga
gagaggagaagaacacggagtcgggataggagacgatccagaagcagaagtagaggtaga
cggtcccgatcccccagtcctggcaagaacaagaaaacagaaaacagatcaagatctaaa
gaaaagacagaaggtgtagaagtttccaaggaaaagaaaaaagagaaagaggacaaagaa
gaagaaaaggataaagaggttaataactttgatcagaataaactggaggaggaaatgaga
aaaagaaaagagagagtagagaaatggagggaagagcagcgcaagaaggctatggaaaac
atcggagaactgaaaaaagaaattgaagaaatgaaacaggggaaaaaatggagcttagaa
gatgatgatgatgatgaggaggaaactgcagaaggagaaaaagaaggcatggaggtggaa
gatgaagaattagaccctctggatgcttacatggaagaagttaaagaagaggtcaaaaag
ttcaatatgagaagtgtgaagggtggaggtgggagtgaaaagaaatctggaccaactgtt
accaaagtagtgactgtggtgacaaccaaaaaggcagctgtagaatcagaaaagaagaaa
ggggagctgatggagaatgaccaagatgcaatggagtattcttcagaagaggaagaagtt
gatcttcagactgccttgacgggctatcagaccaaacagaggaagctgctagaaccagtg
gatcatggaaagatagagtatgagcccttcaggaaaaatttctacgttgaagttccagag
cttgctaaaatgaccccagaagaggtgaatgtgtacaggctggaaatggagggaattaca
gtcaaggggaaaggctgccccaaaccaatcaaaacctgggtacaatgtggtatttctatg
aaaattctcaattccctcaaaaaacatggctatgaaaagcccacacccatccaagcccag
gctatcccagcaattatgaatggacgtgacctgattggcattgctaaaacaggaagtgga
aagaccattgcatttcttttgcctatgttcaggcatattatggatcagaggtcgttagaa
gaaggagaaggtccaatagctgttatcatgaccccgactcgagagttggctttgcaaatt
accaaggagtgtaagaagttctcaaagactctgggacttagagttgtgtgtgtctatgga
ggaacaggaatcagtgagcagatagcagaactgaaacgaggtgctgaaattattgtttgc
acacctggacgtatgattgacatgttagcagctaacaatggacgggtgacaaaccttcgc
agggttacatacgttgtacttgatgaagcggacagaatgtttgacatgggttttgaacca
caggtcatgcgcattgtagacaacatcaggcctgatcgtcagacggtcatgttctctgcc
actttccccagagccatggaggctttagctcgtcgaattctgaataaacctattgaggtt
caagttgggggaagaagtgttgtctgttctgatgtggagcaacatgtaattgttatagaa
gaagagaacaaattcttgaagttacttgagctgctgggacattatcaggagaaaggatct
gttatcatatttgttgataaacaggaacatgctgatgggttgttgaaagatttaatgaga
gcttcttatccctgcatgtcacttcatggaggaattgatcagtatgacagagacagcata
attaatgattttaagaatggagcgtgcaaacttcttgtggccacatcagtagcagcaaga
ggcctggatgtaaagcagctgatgctggtagtcaattatagttgtcccaaccattatgag
gattatgtacacagagcaggccgaactggacgagccggcaataaaggatttgcatacact
tttattactgaagatcaagcacgatatgctggtgatatcattaaggctttggaattgtca
gggaatccagttcctgctgaactggagaagctctggggtgacttcaaagatcagcagaaa
gctgaaggaaagattattaaaaagagtagtggcttctctggcaaaggatttaagttcgat
gaaacagaacaggctttggctaatgaacgcaagaaactacaaaaagctgctcttggcttg
caggattcagatgatgaagatacagctgttgatattgatgaacaaattgagagcatgttc
aattcaaagaagagagtgaaagatatggcagcaccaggaacatctaatgctcctactccc
acagctggtaacgcagaaaaactggaaatcgccaaaagattggcattgagaatcaatgcc
cagaagaatcttggtgcagaggcacaagtgttcgtccctttccacttcaaggatgtgatg
cagcaggcaacaaacgctatcttgagaggaggcacaattcaggctcctacagtatctgcc
aaaaccattgcagagcaactggctgaaaagatcaatgctaagctcaattatgtacctata
gagaaacaggaggaagagaaacaggagggaggacaaaatgaatcctttaagagatatgag
gaggaactggagatcaatgacttcccacagactgccaggtggaaagttacgtctaaggaa
gctctgcagagaatcagtgaatattctgaagctgctattacaatcagaggaacatatttc
cctccaggcaaagagcctaaagaaggcgaacgaaaaatttatttggctatagagagtgcc
aacgagctagctgtgcagaaagcaaaggctgaaatcacgagacttataaaggaagaacta
atcagattacaaaattcataccaaccaaccaacaaaggaagatacaaagttttataa
DBGET
integrated database retrieval system
