Alligator mississippiensis (American alligator): 102560483
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Entry
102560483 CDS
T03087
Symbol
GTF2H2C, GTF2H2
Name
(RefSeq) GTF2H2 family member C
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03022
Basal transcription factors
amj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
102560483 (GTF2H2C)
09124 Replication and repair
03420 Nucleotide excision repair
102560483 (GTF2H2C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102560483 (GTF2H2C)
03400 DNA repair and recombination proteins [BR:
amj03400
]
102560483 (GTF2H2C)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
102560483 (GTF2H2C)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
102560483 (GTF2H2C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
HscB_4_cys
IBR
Matrix
Motif
Other DBs
NCBI-GeneID:
102560483
NCBI-ProteinID:
XP_006270035
UniProt:
A0A151PHY7
LinkDB
All DBs
Position
Un
AA seq
395 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATIEDILFKAKRKKLFEHHGQVRLGMMRH
LYVVVDGSRTMEDQDLKPNRLTCTLKLLEYFVEEYFDQNPISQIGIIVTKSKRAEKLTEL
SGNPRKHITALKKAIDMACHGEPSLYNSLNLAMQTLKHMPGHTSREVLIIFSSLTTCDPS
NIYELIKCLKAVKIRVSIIGLSAEVRVCTVLARETGGTYHVILDESHYKELLMHHVTPPP
ASSSSECSLIRMGFPQHTIASLSDQDAKPSFSMVQLENNSDPGLTLGGYFCPQCRAKYCE
LPVECKICGLTLVSAPHLARSYHHLFPLDAFQEVPLEEYQGERYCHGCQGEMKDQHVYIC
KVCQSAFCVDCDLFVHDSLHCCPGCIHKHPAPLSV
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaacctgaaagaaccaaacgctgggaaggaggttatgaacgaacatgggag
attctcaaggaagatgagtctggatcactgaaagcaactatagaggatatactctttaag
gccaagagaaaaaaactctttgaacatcatggccaagtccgacttggaatgatgcgtcat
ctttatgtggtggttgatgggtcaagaactatggaggaccaagatttaaaacctaacagg
cttacttgtaccttaaagttattggaatattttgttgaagaatactttgaccaaaatcct
atcagtcagattggtataattgtaactaaaagtaaaagagctgaaaagctgacagagctt
tcaggtaacccaagaaaacatataactgctttgaagaaggctatagatatggcttgccat
ggagagccatctctgtataactccttaaatttggccatgcaaactttaaagcatatgcca
ggacatacaagcagagaggttttgataatcttcagtagcctgaccacatgtgatccatct
aatatctatgagctaatcaagtgtttaaaggcagttaaaatcagagtatccatcataggc
ctatctgctgaagttcgagtttgcactgtgcttgcccgagaaactggtggaacataccat
gtgattttagatgaaagccattataaggaactgctgatgcaccatgttactcctcctcca
gccagttcaagttcagaatgctcccttattcgaatgggttttcctcagcatacaattgca
tctctctctgaccaggatgcaaaaccatcttttagcatggtgcagttggaaaacaacagt
gatccaggtctaacattaggtggatatttctgtccccaatgcagagccaaatactgtgaa
ctccctgtggaatgcaaaatctgtggtcttacattagtatcggcaccccatctggctcga
tcttaccatcacctctttcccttggatgcctttcaggaagttccactggaagaatatcaa
ggggaacgctattgtcacggctgccaaggggagatgaaagaccaacatgtttacatttgc
aaagtctgtcagagtgcattttgtgtggactgtgacttgtttgttcatgattctctacac
tgctgtcctggatgtattcacaagcaccctgctcctctgtctgtatga
DBGET
integrated database retrieval system
