Alligator mississippiensis (American alligator): 102561118
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Entry
102561118 CDS
T03087
Symbol
THOC3
Name
(RefSeq) THO complex 3
KO
K12880
THO complex subunit 3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102561118 (THOC3)
09122 Translation
03013 Nucleocytoplasmic transport
102561118 (THOC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102561118 (THOC3)
03041 Spliceosome [BR:
amj03041
]
102561118 (THOC3)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102561118 (THOC3)
Spliceosome [BR:
amj03041
]
Complex C
Other components
EJC/TREX
102561118 (THOC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102561118 (THOC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
eIF2A
RMC1_N
NBCH_WD40
Coatomer_WDAD
PD40
Peptidase_S9_N
Nup160
Me-amine-dh_H
Cytochrom_D1
YNCE
PROPPIN
DPPIV_N
DUF359
Motif
Other DBs
NCBI-GeneID:
102561118
NCBI-ProteinID:
XP_006274623
UniProt:
A0A151MTG5
LinkDB
All DBs
Position
Un
AA seq
323 aa
AA seq
DB search
MALSPYVLAMQELFRANTRSREFPAHGAKVHSVAWSCCGRRLASGSFDKTASVFVLEKDR
LVKENNYRGHGDSVDQLCWHPSNPDLFVTASGDKTIRIWDVRTTKCIATVNTKGENINIC
WSPDGQTIAVGNKDDVVTFIDAKTHRSKAEEQFKFEVNEISWNNDNNMFFLTNGNGCINI
LSYPELKPIQSINAHPSNCICIKFDPMGKYFATGSADALVSLWDVDELVCVRCFSRLDWP
VRTLSFSHDGKMLASASEDHFIDIAEVETGEKLWEVQCESPTFTVAWHPKRPLLAFACDD
KDGKYDSSREAGTVKLFGLPNDS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgtccccgtacgtgctggcgatgcaggagctgttccgcgccaacacgcgcagc
cgcgagttcccggcgcacggcgccaaggtgcactcggtggcctggagctgctgcggccgc
cgcctcgcgtccggctccttcgacaagacggccagcgtcttcgtgctggagaaggaccgg
ctggtgaaggagaacaattaccgcggccatggggacagcgtggatcagctgtgctggcac
cccagcaacccggacctctttgtcactgcgtcgggggacaagaccatccgtatctgggac
gtccgcaccaccaagtgcatcgccacggtgaacaccaaaggggagaacatcaacatctgc
tggagccccgacggccagaccatagcggtggggaacaaggacgacgtggtcaccttcatc
gacgccaagacccaccgctccaaggctgaggagcagttcaagtttgaggtgaacgagatc
tcttggaacaatgacaacaacatgttcttcctgaccaacggcaacggctgcatcaacatc
ctcagctacccagagctgaagcccatccagtccatcaatgcccatccttctaactgcatc
tgcatcaaatttgaccccatggggaagtactttgccacaggaagcgcagacgctctcgtc
agcctgtgggatgtggacgagctggtgtgtgtgaggtgcttttccaggctggactggccc
gtgagaacactgagcttcagccacgatgggaagatgctggcatctgcctctgaggatcac
ttcattgacatagcggaagtggagacgggagagaagctgtgggaggtgcagtgcgagtca
cccaccttcactgtggcctggcaccccaagcgcccgctgctggcctttgcatgtgacgac
aaggacggcaagtacgacagcagccgggaggctggcaccgtgaagctcttcgggctcccc
aacgactcatag
DBGET
integrated database retrieval system
