Alligator mississippiensis (American alligator): 102561334
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Entry
102561334 CDS
T03087
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03082
ATP-dependent chromatin remodeling
amj03083
Polycomb repressive complex
amj04110
Cell cycle
amj04330
Notch signaling pathway
amj04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
102561334 (HDAC2)
03083 Polycomb repressive complex
102561334 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
102561334 (HDAC2)
04350 TGF-beta signaling pathway
102561334 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
102561334 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102561334 (HDAC2)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
102561334 (HDAC2)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
102561334 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
102561334 (HDAC2)
BRAF-HDAC complex
102561334 (HDAC2)
REST complex
102561334 (HDAC2)
SHIP complex
102561334 (HDAC2)
MiDAC complex
102561334 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
102561334 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102561334 (HDAC2)
Chromatin remodeling factors
NuRD complex
102561334 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
102561334
NCBI-ProteinID:
XP_006270115
UniProt:
A0A151M2Z3
LinkDB
All DBs
Position
Un
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggcggcggcaagaagaaagtctgctactactacgacggtgatatt
ggaaactattattatggccagggccatcccatgaaacctcatcggatccgtatgacccac
aacttgttgctaaactatggcttgtacagaaaaatggaaatttatcgacctcataaagct
acagctgaagaaatgaccaagtaccacagtgatgaatacattaaatttcttcgatcaata
agaccagacaatatgtctgaatatagcaagcagatgcagagatttaatgttggagaagat
tgtcctgtgtttgatggactgtttgagttctgccagttgtcaacaggaggctctgttgct
ggggcggtcaaattaaatagacaacagactgacatggctgttaattgggctggaggactt
catcatgcaaagaagtcagaggcatctggtttctgttacgtcaatgatattgtgcttgct
atccttgaattactgaaataccaccaaagagtgttatacattgatattgatatccatcat
ggtgatggtgttgaagaagcattttatacaacagatcgtgttatgacagtgtcattccat
aagtatggtgaatattttcctggcacaggggacttacgggacattggtgctggcaaaggc
aagtactatgctgtcaattttccaatgagggatggcatagatgatgaatcatatgggcag
atattcaaaccaattatatccaaggtgatggagatgtaccagcccagtgccgtggtattg
cagtgtggagcagattccttgtctggtgataggttgggatgttttaatcttactgttaaa
ggtcacgctaaatgcgtggaagttgtaaagacctttaacttgccattgctgatgctagga
ggaggtggctacactattcgtaatgttgctcgatgttggacgtatgaaactgcagttgcc
ttagattgtgaaattcccaatgagttgccatacaatgactactttgagtattttggacca
gacttcaagctgcatattagtccatcaaatatgactaaccagaatacaccagaatatatg
gagaagatcaaacagcgtttatttgagaacttgcgtatgctacctcatgcacctggggta
cagatgcaggccattcctgaggatgctgttcatgaagatagcggagatgaggatggagaa
gacccagacaaacgcatttctattcgagcttctgataagcggatagcctgtgatgaagaa
ttttctgattctgaagatgaaggggaaggtggacgacgaaatgttgcagatcataagaaa
ggagcaaagaaagccagaatagaagaagacaagaaagagacagaagataaaaaagcagat
gtgaaagaggaggataaatcgaaggacagcagtggtgaaaagacagacaccaaaggagca
aaatcggaacagctcagcaatccttga
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integrated database retrieval system
