Alligator mississippiensis (American alligator): 102562351
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Entry
102562351 CDS
T03087
Symbol
BCOR
Name
(RefSeq) BCL6 corepressor
KO
K23215
bcl-6 corepressor
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102562351 (BCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102562351 (BCOR)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
102562351 (BCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BCOR
PUFD
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Motif
Other DBs
NCBI-GeneID:
102562351
NCBI-ProteinID:
XP_006273428
LinkDB
All DBs
Position
Un
AA seq
1770 aa
AA seq
DB search
MLSATPLYGNVHSWMSNERVRMCGINEDRKIPVNDGEAPKSRLELREENHLNHSVVDATT
AHRIDSLAALSMERSGLMREGLRVPGSIVYSSLCGLGSEKARDATSSIAGLGFTPERNPE
MQFKSNPSEAVENAAVPGKAPNGFSAIYKTPPGIQKNSVPTGETLGLDRTSTDKQSPLNV
NGASYLRLPWVNPYMEGATPAIYPFLDSPNKYSLNMYKALLPQQSTYSLPQHLTYSPVCT
NGERFLYLPPSHYVTPHIPSSLASPLRLSVTSASPAIPPLVHCPDKSLSWKMGVSPGNPV
DSHTYPHIQSSKQPRVPSAKSAASNMSTDPPGLLLSHSPRQSSRVPLVTQVGDAYSEFHK
HFPRITTSPSSSSSVTLPKPYMNVSNEFPPSRLPNGKLPKTNDTGEISQPAAPHVRKTGH
DRKDSRSPPLLEKQTTTKDVIDKPLDLSSKVVDAETTKSDHVKKMAPTVLVHSRAGSGLV
LPGSDVQKETISPSGNGCPIYRPEIISTAPSSWIVPGPGPNEDTGGKNVQLKNKALDWVI
PQQRSSSCPRMGGTEAVVNNISGSVVSGGRPASASPAPNANVDCAKSNRSSIESTASVIQ
HIGQPIATFAKHNNKAAKSNGQETSFKANETALTASSIFLPPNEAFRSPPLPYPRSYLPY
PVPEGIAISPLSLHGKGPVYPHPVLLPNGSLFPGHLAPKPGIPYSLPASRGEFMTYQDAL
GMGMVHPMLLQHSALDINKDEKSERRSRSHERLRYEDAAIRNRLPEVLEPSTKIHFEVPN
DKNMKSHQSSGHNKNAAKSDKHLFSDLLREEQDAKSETNLTKSGFATESSNQVNDPAKHK
VDQATQHRDFLVMREEFGRNNDLHETYNIKQAHSSPLFGLRKEDMSVSQNKERLTVQPPS
AFLETTQGNEGPPMSFGKVQDDAKQFGMGNTQANIEVNQTYTKDGTDDVESTDGKILKPK
PSKLAKRIANSAGYVGDRFKCVTTELYADSSQLSREQRALQMEGLQEDSILCLPAAYCER
AMMRFSELEMKEREGQTATKDSEVCRYSQADWENLKGNNEKKPKSVTLEDAIADQNDNDR
CDFNSDVNNQGHFLETSEEKDSQIEKCYLERHSVYEKAEDPLPENISQHACPRLERKRRH
SGEKVQDDGSPGENFVDELQDEAVSKAKKRKNSKDDWPEREMTNNSSNHLEEPNCNEVTN
LKVCIELTGLHPKKQRHLQHLRELWEQQVSPERSPSGKLGRQSRKDLAEAVQPEATAKVK
DCTEERHTKKRSEVKSNRSWSEESLKTSDNEQGLPLFPVSPHMKGLSSPSANSKRQTQPS
STPALRLAAKQQKIKESRKTDGLCTEEEEDFQAASLLQKYRECEKPSGKRQCKTKHLALQ
ERRRRSSLTGDDTTDIENAEDKVMVTRKFRKRPEPTSDCDSSPAKSHEQKLYDRLQQTPS
LLPVSQPSQLQIASPPQETTPSRPMPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCLE
NKVCDVNHRDNAGYCALHEACARGWLSIVRHLLEYGADVNCSAQDGTRPIHDAVENDHLE
IVRLLLSYGADPTLATYSGRTIVKMTHSELMETFLTEYLTDLQGRSVDDPGLYWDFHGSS
VCDPKDESGFDILANPPGASDEDEDGFSDVFEFEFSDGPLLPCYNIQVSLSQGPRNWLLL
SDVVKRLKMSSRIFRCNFPKLEVVTITEAEFYKQVSLSQLFSCAEDLGAFNAESKELLDL
VEFTNDLKTLLGSSLEWVHPVDDHPLDIHW
NT seq
5313 nt
NT seq
+upstream
nt +downstream
nt
atgctttctgcaacccccctgtatggcaacgttcatagctggatgagcaatgagagggtc
cgcatgtgtgggattaatgaagacaggaaaattccagtaaatgatggcgaggctccgaaa
agcagactggaattgagagaagaaaatcacctgaatcacagtgtggtggatgcaaccaca
gcacatcgcattgacagtctcgcagccctgagcatggagaggtctggacttatgcgggaa
ggacttagagtccctggtagtattgtctattctagcttatgtggacttggctcagaaaaa
gcacgggatgctacaagttctatagctggtcttggatttactcctgaaagaaatccagag
atgcaattcaaatccaatccctctgaagcagttgaaaatgcagctgtccccggaaaagcc
ccaaatggcttcagtgctatatacaaaacgccacctggaatacaaaaaaattctgttcca
acaggggaaactctaggcttggacagaacttcaactgacaaacaaagtcctcttaatgtc
aatggtgctagttacctacggctaccctgggtaaatccttatatggagggtgcaacaccc
gctatttatccttttcttgactcgccaaataagtattcgttgaacatgtacaaggcattg
ctacctcagcagtccacttacagcttaccacagcatctgacttactcacctgtatgtaca
aatggtgaacgctttttatacctgccgccttctcactacgttaccccccacattccgtcg
tcattagcttcacccttgaggctctcagtcacttcagcatctccagcaattccccctctt
gtacactgtccggataaaagcttgtcttggaagatgggagtcagtcctggaaatcctgtt
gactcgcacacctatccacatattcagagcagcaaacagcccagagttccgtcagcaaag
tcggcagctagcaatatgtcaacagatcctcccggtctcttgttgtctcattcaccgaga
cagtcatccagagttcctctggtaacgcaagtcggggatgcctactcagaatttcacaaa
cactttcccagaattacaacatctccttcttcttcttcttcagtgacgctcccaaagcca
tacatgaatgtaagtaatgaatttcctccctcaagactgcccaatggaaaacttcccaaa
acaaatgacactggtgaaatttcccagccagctgcgccacacgtaaggaaaacaggtcat
gacagaaaggacagcaggtcacctccgctcctagaaaaacagactactaccaaagatgtc
attgacaaaccactggacttgtcatcaaaagttgttgatgcagagacaaccaaatctgat
cacgttaaaaaaatggcaccgacggtgttagttcacagcagggctggaagtgggttagtt
ttacctggaagtgatgttcagaaagaaactatttcaccttctgggaatggctgtcctatc
tacaggcctgaaatcattagcactgcaccctcttcctggattgttcctggtccaggtccc
aatgaagatacaggaggtaaaaacgtgcagctgaaaaacaaagcattggactgggtgatc
ccacagcagcgcagctcttcttgcccaaggatgggaggcacggaagctgtagtcaataac
atttcagggtctgttgtcagtggaggtcggccggcatctgcttcaccagctccaaatgct
aatgtggactgcgccaaatcaaataggagctctatagaaagtactgcatctgtcatacaa
catatagggcagcctatagcaacatttgcaaagcataacaataaagcagctaaatccaat
ggccaagaaaccagtttcaaagcaaatgagactgcccttacagcgagttccatattttta
ccaccgaatgaggctttccgatcgccgccactgccctatccaagaagttatctcccgtat
cccgtaccagagggcatcgctatcagcccattatctttacatgggaaaggacccgtgtat
cctcatccagttttattacccaatggcagtctctttcctggacatctggcaccaaaacct
ggcattccatacagcctgccagctagtaggggggagtttatgacctatcaggatgcactg
gggatggggatggtacatcctatgttgctacagcattccgctctggacataaataaggat
gagaaatcagaaaggaggtctagatcacatgaaaggctccgctatgaggacgcggctata
agaaaccgattgccagaggtcctggagcctagcaccaagatccattttgaagtacctaat
gataagaacatgaagtcacaccaaagttcaggtcataataaaaatgctgccaaaagtgac
aaacacctcttttcagatcttctgcgagaggagcaggatgctaaaagtgaaacaaattta
acaaaatctggctttgctactgaaagcagtaatcaggttaatgaccccgcaaagcacaag
gtagaccaagcgacacagcacagagattttcttgtaatgcgagaggagtttggaaggaat
aatgatctccatgaaacctataatattaaacaggcccatagttcaccactgtttggttta
aggaaagaggatatgtcggtaagccaaaataaagagaggttaacagttcagcctccctct
gctttcttggagactacccaggggaatgagggcccacctatgtcttttggcaaagtgcag
gatgatgcaaaacaatttggcatggggaatacgcaggcgaatattgaagttaatcagaca
tataccaaagatggaactgatgatgtagaatctactgatggcaaaatcttgaaacccaag
ccatctaaattggcaaaaagaatcgcaaactctgctggttatgtaggtgatcgattcaag
tgtgttacgaccgaactgtacgctgattctagtcaactcagccgagaacagcgggcactg
cagatggaaggattacaagaggacagtattttatgtctacctgctgcttactgtgagcgt
gcaatgatgcgcttctcagagttggagatgaaagagagagaaggccaaacagcaaccaaa
gactcagaggtctgcagatacagccaggcagactgggaaaacttgaaaggaaataatgaa
aagaagccaaagtctgtcactctggaagatgccattgctgaccaaaatgacaatgataga
tgtgattttaatagtgacgtaaacaaccaaggtcattttcttgaaacttcagaggaaaaa
gattctcaaattgagaaatgttatttggagagacattccgtatatgaaaaggcagaagat
ccattaccagaaaatatcagtcagcatgcatgtccacgtctggagagaaagcgtagacac
tctggtgagaaagtgcaggatgatggcagcccaggtgaaaactttgtggatgaactgcaa
gatgaagctgtatcaaaggcaaaaaagagaaagaactccaaagatgactggcctgagagg
gaaatgacaaacaattcctctaaccacttagaagagcccaattgtaatgaggtgaccaac
ctgaaggtgtgcattgaattaacagggctccatcccaaaaagcagcgtcacctgcagcat
cttagggaactatgggagcagcaggtgtcaccagagagatccccgtccggcaagttgggc
cggcaaagcaggaaagatttagctgaggctgttcagccagaggccactgcaaaggtcaaa
gactgcacagaagaaaggcacaccaagaaaaggtcagaggtcaaaagcaatagaagttgg
tctgaagagtccctcaaaacaagtgacaatgaacaaggcttgcctctcttcccggtgtct
ccgcacatgaagggcctgtcttctcccagtgcaaacagcaaaaggcagactcagccaagc
tccactccagccctgaggttggctgccaaacagcagaaaattaaagagagccggaagaca
gatgggctgtgcacagaagaggaggaggatttccaagctgcatctctgctgcagaaatac
agagagtgtgagaagccatcagggaaacgtcagtgtaaaacaaaacacttggcactacag
gagaggagaaggaggtcatccctgacaggggatgacactacagatattgaaaatgctgaa
gataaggtcatggtaacaagaaaattcagaaagcgaccagagcctacttcagactgtgac
tcctcaccagccaaatcacatgagcagaagctgtatgatcgcctgcagcagactccctca
ttattacctgtctctcagccctcgcagctgcagattgcaagcccccctcaggagaccacc
ccaagtcgtcccatgccgcctgaagcgcgaaggcttattgtcaataagaatgctggggaa
actcttctgcaaagggcagctcgtctgggatatgaggaagtggtactctattgtttggaa
aacaaggtctgtgatgtaaatcatcgtgacaatgcaggttattgtgccctgcatgaggcc
tgtgccagaggctggctgagcatcgtgcgacatctcctcgagtacggggctgacgttaac
tgcagcgctcaggatggaaccaggcctatccatgatgcagtggaaaacgatcatttagaa
attgtccgcttgctactttcttatggcgctgatccaacacttgctacatactcaggtaga
accattgtgaaaatgacacacagtgagctaatggaaacatttctgacagagtatttaact
gacctgcaaggtcgaagtgttgatgaccctggtttgtactgggatttccatggcagctct
gtgtgtgatccaaaagatgaatctggatttgacatcttggcaaaccccccaggtgcaagt
gatgaggatgaagatggctttagcgatgtttttgaatttgaattttcagatgggcctctc
ttgccatgttacaacattcaagtgtctctttctcagggaccacggaactggctactgctc
tccgacgtggtaaagaggctgaaaatgtcatctcgcatattccgttgcaacttccctaag
ctggaagttgtcacaatcacagaggcagagttttacaaacaggtttctttaagtcagttg
ttctcttgcgctgaggaccttggagcttttaatgcagaaagcaaggaactgttggactta
gtagagtttacgaatgatcttaagactttgcttggatcctcacttgagtgggtgcatcca
gttgatgaccatcccttggatattcattggtga
DBGET
integrated database retrieval system
