Alligator mississippiensis (American alligator): 102562527
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Entry
102562527 CDS
T03087
Name
(RefSeq) sodium channel protein type 5 subunit alpha
KO
K04842
voltage-gated sodium channel type X alpha
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102562527
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102562527
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Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ
Motif
Other DBs
NCBI-GeneID:
102562527
NCBI-ProteinID:
XP_019352930
LinkDB
All DBs
Position
Un
AA seq
1828 aa
AA seq
DB search
MANLLPSSGTFQKFTRESLAAIEKQISAQKACHDQQPEEKPRPQLDLQAFQTLPALYGNP
PPELIGEPLEDLDPYYSNHKIFMVLNKKKTIFRFSATHALWILSPFHPIRRAVIKILVLT
LFTLFIMCTIITNCVFMVLIPDKASSSSSPNWTKYVEYTFTGIYTFESLIKILARGFCLN
EFTFLRDPWNWLDFIVIVLAYAGEFSDLGSVSVLRTFRVLRALKTISIVPGLKVIVGALI
QSVKKLADVMILTVFCLSVFALVGLQLFKGNLRNKCVRNHTKINNSIYVDDKTWDSYDAF
LNESENVAIKNGTSDNLLCGNGSEAGACPETFICLKVGKNPDYDYTSFDTFGWAFLSLFR
LMTQDYWERLYQQTLRASGKIYMLFFMLVIFLGSFYLVNLILAVVTMAYEDQNKATIAET
EAKERQFREAMELLKKEQEALAARENDTASLSSFEMTPLPSKESKDRRNMRKKNRSLGIE
DHEEDQHFPKSQFIDNRRKLTLLGVNYDSSVSQMKRRPSHGSVFNFQIPGIDVGSKIDFG
EDEISNAGENEIQRGSLLVARMGRHPSVQSQASHCSHPATPNYIQNDKWNSTDDCNGMPS
LMRGGNAKAYHPEPTSPEGSLLPPVMEIPGKGDLTPLYDETSKMHLPRHLSVEYFNESLQ
RERAASAVSIITSALEELEESQRKCPPCLNKFAVKYLIWDYCPLWLQIKKRVSLFVMDPF
IDLSITLCIVLNTIFMALEHHNMSKDFNHMLKIGNQIFTGIFTAEMILKIISLDPYYYFQ
QRWNIFDSLIVTLSLIELALPRGKDKKKGGTFSVLRSFRLLRVFKLAKSWPTLNTLIKII
GNSVGALGNLTLVLAIIVFIFAVVGMQLFGKYYKEHCWLISKDCQPRWHMRDFFHSFLIV
FRILCGEWIETMWDCMVVAGEPMCLCVFLLVMVIGNLVVLNLFIALLLNSFSATNLQTAE
DDSEMNNLRIAVARIRRAVYLVKYAMWDCCCGKLWHAKKTFKKKMELTSQNMCVVTVDER
KNCVENNRNHGTERNEDQCSLSMFEDFITNPNVFICVPIAEAEKISEDFEEHDDKYSICT
ETEYNKQENHLRQRGEHCKSPAGWSKGSEGSCEDLSEFSIGGQWKVESPSLEQKESDVFS
SSEASTVDLTDPDEILKQIPELSENLKEPNNCFPDGFIQYFPCCMVDTTHFPGRQWWNLR
KTCYRIIEHPWFESFIIFMILLSSGALVFEDVHLSERPRIKIMLEFLDKMFTFIFVLEML
LKWVAYGFKEYFTNAWCWLDFLIVDVSLASLIANLLGYSEVGPMKSLRTLRALRPLRALS
RFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFQKCVNLTEEDSELSH
LIENKNQCQSLNDTKKIYWINDKVNFDNVGSGYLALLQVATFKGWMEIMYAAVDSREESE
QPKMESNRYMYLYFVIFIIFGSFFTLNLFVGVIIDNFNEQKKKISGEDIFMTEEQKKYYN
AMKKLGSKKPQKPIPRPLNKYQGFLFDIVTSQPFDIAIITLICLNMVTMMVETDDQSATK
TAVLNKINILFVAIFTGECVVKLLALRQYYFINAWNIFDLIVVVISIVATLLSDLAKQFE
SYLSPTLFRVIRLARIGRILRLIRAAKGIRTLLFALMMSLIHCLDILFAFTKRVLGDSGE
MDTLKVQMEEKFMAANPSKLSYEPITSTLRRKQEERSAIIIQRAYRSHLLQRSLKQASFL
YRRRTSDGDILEEDAPEKEGLIALMMNENYDRIVDKSASMSTTSFPPSYDSVTGANNDNL
KVQMKDSFKSDDPIDCELSVDRDKGSTG
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttgctaccaagttctggcactttccagaaattcactcgtgaatccttggct
gctattgagaagcaaatctctgcccagaaggcatgccatgaccagcaaccagaagagaaa
cctcggcctcagcttgatctgcaggcttttcaaacactgcctgctctctatgggaatcct
cctccagagctcattggggaaccactggaggatcttgatccttactacagtaatcacaag
atttttatggtattgaacaagaagaaaacaatcttccgatttagtgctacacatgccttg
tggattcttagtccgttccatccgatccgaagagcagtgattaaaatcttggtactcaca
ttattcactttgtttattatgtgtactattataaccaattgtgtgttcatggtgcttata
cctgataaggcatcttcatcttcatctcctaactggaccaagtacgttgagtacactttc
actggcatttacacttttgaatccttgataaaaatattggcaagaggattctgtctgaat
gaattcacttttcttcgagatccatggaattggctggatttcattgttattgttctggca
tatgctggagagtttagtgacttaggcagcgtttcagtccttcgcacattcagggtgctg
agagctttaaaaaccatttcaatagtgccaggattgaaggtcatcgtaggtgcacttatt
cagtctgttaagaaacttgctgatgtgatgatcctgactgttttctgcttgagtgtcttt
gccctcgtagggctccagctctttaagggtaatttgagaaataagtgtgtcaggaatcac
actaaaataaataactcaatatatgtggatgataagacatgggactcttacgatgccttc
cttaatgagtcagaaaatgttgccataaagaacggcacctcagataacttactgtgtggc
aatggctcagaagctggtgcctgcccagagacattcatatgtctgaaagttgggaaaaac
cctgattatgactatacaagctttgatacatttggctgggcctttctttcattattccgc
ttgatgacacaggattactgggaacgtctctatcagcagactctcagagcttctgggaag
atctacatgctcttttttatgctggtcatctttctgggctcattttatctggtcaacttg
atcctggctgtagtaactatggcatatgaagatcagaacaaagctactattgctgaaaca
gaagcaaaggaacggcagtttcgggaagccatggaactattaaagaaagaacaggaggca
ttagctgccagagaaaatgatactgcatcacttagctcctttgaaatgacccctttgccc
tccaaagaaagcaaagacagaaggaatatgagaaagaaaaataggtctcttggaatagaa
gatcatgaggaagatcaacattttcccaaatcacagttcattgacaatcgccgaaagttg
actctccttggtgttaattatgactccagtgtaagccaaatgaagcgcaggcccagccat
ggaagtgtatttaatttccagatacctggaatagatgtgggctccaaaatcgattttggt
gaggatgagatcagcaatgctggggaaaatgaaattcagcgtgggtcattgctggttgca
cggatgggaagacacccaagtgtgcaaagtcaagcgagccattgttcgcatcccgctact
ccaaactacatacagaatgacaagtggaacagcacagacgattgcaatggtatgccttca
ctgatgcgaggaggaaatgccaaagcttaccacccagaaccaacttcccctgaagggtca
ctgctccctcctgttatggaaatcccaggaaaaggtgatttgacccctttatatgatgag
accagcaagatgcatttaccccgtcatttatcagtggagtacttcaatgagtcactccag
agagaaagggcagcaagtgcagtcagcatcattaccagtgctctggaagaacttgaagaa
tcacaacggaaatgtcctccctgcttgaacaagtttgccgtaaagtatcttatttgggac
tattgcccactgtggttgcaaatcaaaaaaagagtgtctctttttgtaatggatccattt
attgacctctctatcactctctgtattgtactgaatactatcttcatggcattggagcat
cataacatgtcaaaagactttaaccacatgctaaaaataggcaatcagatctttactgga
atttttactgcagaaatgatcttgaaaatcatttctttagatccctactattattttcaa
cagcgctggaatatttttgatagtttaattgtaaccctcagcttaattgaactggcttta
ccaagaggcaaagacaaaaagaaaggaggaactttttccgttttacgctccttcagactg
ctgagggtcttcaaactggcaaagtcctggccaactttaaatactctcattaaaatcatt
ggcaactctgttggtgccctgggaaacctcaccctggttctggcaatcatagtctttatt
tttgctgtagtaggaatgcaactttttgggaaatactacaaggagcactgctggctaata
agtaaggactgccaaccacgttggcatatgcgtgattttttccactcatttcttattgta
ttccgaattctgtgtggagaatggattgaaaccatgtgggactgtatggtggtggctgga
gaaccaatgtgcctttgtgtcttcttgttggtcatggtgataggaaacctagtggttctc
aacctgttcattgcattgctgctgaactccttcagtgccaccaacctgcagacggcagaa
gatgacagcgagatgaacaacctccggattgcagtggctcggatccgccgggcagtttat
ttggtaaaatatgcaatgtgggattgttgctgtggaaaactctggcatgcaaaaaaaaca
ttcaaaaagaagatggaattgacttcccagaacatgtgtgtggtgactgtggatgaaagg
aaaaattgcgtggaaaataacagaaatcatgggactgagagaaatgaagaccagtgctcg
cttagcatgttcgaagactttatcactaaccctaatgtatttatctgtgtccctattgcg
gaggcagagaagattagtgaggattttgaagaacatgatgataaatacagcatatgcaca
gaaacagaatacaataaacaggaaaaccacctgagacagaggggagagcactgtaaaagc
ccagcaggttggagtaaaggatctgagggttcctgtgaagacttaagtgagttttccata
ggtggacaatggaaagttgagtcaccatcactagaacaaaaagagtctgatgttttcagc
tcctctgaagccagcacagtagatctgactgatccggatgagattctcaaacagatccct
gaattgtctgaaaacttaaaggaaccaaataattgttttccagatggtttcattcaatat
tttccttgctgtatggtggacaccacacattttccaggccgacagtggtggaatctgagg
aaaacctgctacagaattattgaacatccttggtttgaatcctttatcatctttatgatt
ctgctgagcagtggagctctggtttttgaagacgttcatctttcagagcgaccacgtatt
aaaataatgttggaatttcttgacaaaatgtttaccttcatctttgtcctggagatgctt
ctgaaatgggtggcttacggcttcaaggagtacttcaccaatgcctggtgttggcttgat
tttctcattgtagatgtctctttagcgagccttatcgcaaatttacttggctactctgaa
gtgggtcctatgaaatctcttaggactctccgagctttgagaccattgagagcactgtca
agatttgaagggatgagggtggttgtgaatgctctagtgggagccatcccgtccatcatg
aacgttctgctcgtctgcctcattttctggcttattttcagtatcatgggtgtgaacctg
tttgcaggaaagtttcaaaaatgtgttaacttgaccgaagaagattcagaattaagtcat
cttattgagaataaaaaccagtgtcaaagcctaaatgacacaaaaaaaatatactggatc
aatgataaggtcaactttgataatgttggttctggttacctagcacttcttcaggtggca
acatttaagggctggatggagattatgtatgcagcagttgattcacgagaggaatcagaa
cagccaaaaatggaatccaatcgctatatgtacctctattttgtgattttcatcatcttc
gggtctttcttcacactaaatctctttgttggggttattattgacaactttaatgaacaa
aagaaaaagataagtggagaggacatttttatgacagaagaacagaaaaaatattataat
gccatgaaaaaattgggatccaagaaaccccaaaaacccatcccaaggccactgaataaa
taccaaggattcctcttcgatattgtaacaagtcaaccctttgatattgccatcataact
cttatctgtcttaacatggtcaccatgatggtggaaactgatgatcaaagtgcaaccaag
acggctgttcttaacaaaatcaatatactctttgttgccatctttactggagaatgcgtt
gtgaaattgttggctctacgacaatactatttcatcaatgcctggaacatatttgattta
attgttgtggtcatatcaattgtagccactctgctttctgaccttgctaaacaattcgaa
agttacttgtcacctacgctcttcagagtcattcgcttggctcggattggacgaatacta
agactcatccgagctgccaaaggaattagaactctcctttttgccttaatgatgtcactg
atccactgcttggatattttgtttgcttttaccaaacgagtgttaggagactctggggag
atggatactcttaaagtacagatggaggaaaagtttatggctgccaacccatccaagctt
tcatatgaaccaattacaagtacgctcagacgcaaacaagaggagagatctgctattatt
atccagagggcttacaggagtcacttgcttcaacgttccttgaagcaggcctctttttta
tatcgtcgtagaaccagtgatggtgacatccttgaagaagatgctccagagaaggaagga
ctcattgcacttatgatgaatgaaaattatgataggattgtagacaaatctgcaagcatg
tccacaacctctttccctccatcctatgacagtgttactggagccaataatgacaatctc
aaggtacagatgaaagattctttcaaaagtgatgaccctatagattgtgaactatctgtg
gacagagataagggatccactggttaa
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integrated database retrieval system
