Alligator mississippiensis (American alligator): 102563989
Help
Entry
102563989 CDS
T03087
Symbol
POM121C, POM121
Name
(RefSeq) POM121 transmembrane nucleoporin C
KO
K14316
nuclear pore complex protein Nup121
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102563989 (POM121C)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102563989 (POM121C)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102563989 (POM121C)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
102563989
NCBI-ProteinID:
XP_006270288
LinkDB
All DBs
Position
Un
AA seq
993 aa
AA seq
DB search
MVQSPVTVKIAPPDSNLSHSPILEQLISPVALSSNSTLDPCAKETVLSALKESRKRAVEE
EDDQTFPNEQENKRRRHDSSGSGQSAFEPLVANGAPASLVPKPGSLKRGLTSQCLDECLN
KRSRSSSISSMNNMYTGGIPSSIRNAIASSYSSTRGLSQVWKRSGLSTSPLSSPASSRSQ
TPERPLKKAREEEPHRSSTSTPVKSDMELQAERAVETPVQKKQSSLNLPSLSESSGKRKR
KIQLLSSRRGDQLALPPPPQLSFPVTVEDLDAEKKAVLKCFNKVLEDKTVDSTATSSAET
IPASKPLSFTLMSAGPTSVLTAPLVSNTGSLLESLKKMQNSQSIPVLSDSTGVAATSQPV
PAAPLLSASNVPLNSSSLSVTASDSKLVPMLNLPVPLAPPCSLVQPGSSESSLGVPTSLE
LGPTPSKPPSTPKPSILFGMLSTPPASQPAAATATSSTPTTTAPVFKPIFGSLSKSENMA
PSAAGTSTTVTVSSSATSLSTTSPASTTVFKPVFGSLTTSGPSATASPFPFKQASQLAST
ADLNTASTTGPPVFASFPNSIFTTAATTSTVLSTITECTTKPMFSFGLNLPSSTSVSASP
AVSTATSTSASQPFLFGAPSSSVPSTETGFASTGPVFGFGKPTVTTATTTTNVPAGSTFG
QAPLNVAQATPSTITTTTTGFSIFGSAALTSSTPATTGQSTLSFGSSLTPFGSFGTGAKP
PPAYSGAASQPAFGTGTSDSQQSANKPTAGPASFSAPFSFGASTTQSTAQPAFGSNTQPA
FGANSQASFGTSSNQPAFGGTTSIFSFGTATTATTSSFGSNTQTTNSGARGMVFGSATPS
PFAFGASTQQSTGPSAFGIGSPSLGGSTPAVAFNFGAGQSGSAGAITLFGSSLTQNTLGA
QNQSTSFAFSAAGTPDNKPVFGGTPAPSFGQSTPVPGGAGGGSNSLSFGTPSTPASGFGS
VGPSFAPSFSIGSGSKTGARQRLQARRQHTRKK
NT seq
2982 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagagcccagtgacagtgaagattgctccgccggacagcaacctgtcccattct
cccatcttggagcagttgatttcaccagtggccttatcatccaatagcaccctggatcca
tgtgcaaaagagactgtgctcagtgcccttaaggagagcaggaagagggctgtggaggag
gaggatgaccaaactttccccaatgaacaggaaaacaaaaggaggcgacatgacagcagt
gggagtggacagtcggcttttgagcctctggtggcaaatggagccccagcctctcttgta
cccaagccaggctctctgaagaggggccttacctcccagtgtctagatgagtgcctaaac
aagagatcacgtagcagttccatcagctccatgaacaacatgtacacaggtgggattccc
agctccattcgcaatgccatcgccagctcctacagctctacccggggcctctcgcaggtg
tggaagagaagtggcctgagtacttcccctctttccagtccagcatcttcccgctctcag
acaccagagaggcctcttaagaaagcaagagaagaagagccccatcgatctagtacttcc
accccagtgaaatctgacatggaactgcaggcagagagagctgtggagacccctgtgcaa
aagaagcaaagttccttgaacttaccctccctgtcagagagcagtgggaagcgcaagcgg
aagatccagctgctgtcctctcgtcgaggagaccagcttgccttgcctcctccccctcag
ctgagctttcctgtcacagtcgaggacttggatgcagaaaagaaggcagtgctcaagtgt
ttcaacaaagtcttggaggataagactgtagattccactgcaaccagttctgcggagacc
atccctgcatccaaacccctgtcgttcacactgatgtctgctgggcctacatctgtactg
acagcccctctggtttccaacactggctccttactggaaagtctgaagaaaatgcagaac
agccagagtattcctgtgctttcagattcgacaggggttgcagcaacttctcagccagtt
ccagcagcccctctgttgtcagcctccaatgtaccactgaattcaagctcattgtctgtt
actgcatcggactcaaagcttgtgcccatgttaaacttacctgttccattagcccctccc
tgctcccttgtccagcctggcagcagtgaaagcagcttgggggttcccacttcactggag
ctaggcccgacccctagcaaacctccttccacccctaaaccaagcatcctttttgggatg
ctgagcactcctcctgccagccagcctgcagcagcaacagctacatcttccacccccacc
accactgcccctgtgttcaagccaatctttggcagcctgtcaaaaagcgagaacatggcg
ccttctgcagctggcacttccacgacagtcacggtgtcttccagtgctacatctctctca
acaacctcccctgccagcaccaccgtgttcaagcctgtttttgggagcttgacgacatct
ggaccctcagcaacagcttctccctttccgtttaagcaggcctctcagctggcatccact
gctgatctgaacacagcttccaccacaggcccccctgtgtttgccagcttccccaatagc
atcttcacaactgcagcgacgaccagcactgtactgagtaccatcactgaatgcactacg
aagcccatgttcagttttgggcttaacctgccgagctccaccagtgtgtcagccagccca
gctgtcagcacagccacctccaccagtgcatctcagcccttcctctttggagccccttca
agctcagttcccagcacagaaacaggcttcgcatccacaggccctgtttttgggtttgga
aagcctactgtcaccacagcgactaccaccactaacgttccagcgggctccacctttggc
caggcacccttgaatgtagcacaggccaccccttccaccattaccaccaccaccaccggc
ttcagtatttttggcagtgctgctctgacttcttcaaccccagcaacaacaggccagtca
acactgtcttttggctcttccctcactccgtttggttcctttggcactggtgccaaacca
ccccctgcatactcgggggcagctagtcagcctgcgtttggcactggtacctcagacagc
cagcagtctgccaacaagcctacagctggcccagcaagctttagtgcccctttcagcttt
ggagcctccacaacccagtctactgctcagccagcatttggcagcaacactcagccagcg
tttggtgccaacagccaggcttccttcggcacgagcagcaaccagccagcatttggaggc
accacatccatcttctcctttggaacagctaccacagccaccacatcaagttttggttcc
aacacccagactacaaacagtggggccaggggcatggtgtttggcagtgccactccatct
ccattcgcttttggggcatccacccagcaaagcacaggacccagtgcctttggcattgga
tcaccttccctaggtggaagtacccctgctgtagcatttaattttggggctgggcagagc
ggatcggcaggtgccataacactctttggttcctccctgacgcagaacacgctgggtgcc
cagaaccaaagcacatcatttgccttctctgcagctggcacacctgataacaagcctgtg
tttggaggaactcctgcacccagttttgggcagagtacccctgtcccaggaggagcagga
ggtgggagtaacagcctttcctttggaacccccagcactcctgcctcaggttttggaagc
gtggggccatcatttgcaccatcattctccattgggtcaggatccaagactggggcccgt
cagcgcctgcaggcacgaaggcagcacacccgcaaaaagtag
DBGET
integrated database retrieval system
