Alligator mississippiensis (American alligator): 102565319
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Entry
102565319 CDS
T03087
Symbol
TSR1
Name
(RefSeq) TSR1, ribosome maturation factor
KO
K14799
pre-rRNA-processing protein TSR1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amj03009
]
102565319 (TSR1)
Ribosome biogenesis [BR:
amj03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
102565319 (TSR1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIBIOP_C
AARP2CN
Motif
Other DBs
NCBI-GeneID:
102565319
NCBI-ProteinID:
XP_019353995
LinkDB
All DBs
Position
Un
AA seq
653 aa
AA seq
DB search
MAVPGAAAAHRPGALKQQNKPHKGGRHGGGAQRRAPGESRPLXXXXVPGAGGGTGRREAS
XRGRLCLQVLAEKRLLGGADGPPHLVAVVPLHEGARGPDALRLLRSNAANLVVSEADGAR
GFTLLCPRLRQRWRFVLAPTRDFHAVLDLAKVADSLLFVLHPEDGWDSAGENCLSCLFAQ
GLPSCALAVQGMADLPPKKQTEAKKKLSKAIEKRFPEAKLFPLNTEQESLLLLRHLAAQK
QRHLAFRDRRAYLLAHAAEFVPSQESDLVGTLKVSGFIRGQPLNVNSLVHIVGQGDFQMS
QVDAPPDPLCLNPRAAKRPERKGQDMEIQDEPGNSAVQMEEDVKVLMKADPSRQELLQSE
VVPDPMEGEQTWPTEEELKEAEEAVKERRKTVKVPKGTSKYQAAWIVDDEEDGSEEDEDG
DSMEEDDLMEEEAFQDGESSEEEEEPVEDECETMTLPESARDDQYDERVEEDEQVLEKYR
QERTDEMFPDEVDTPRXXXARVRFQKYRGLKSFRTSPWDPKENLPRDYARIFQFQDFSXT
RKHVFRQLEKEEIDGAAVGWYVTLHISSVPVSVMESFRQGKPLVLFSLLPHEQKMSVLHF
LVRRHPGNVEPVKAKEELIFHCGFRRFRASALYSQHTSGGQGLQPRGAQGSCM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcccggcgcggcggccgcgcaccggcccggcgctctgaagcagcagaacaag
ccgcacaagggcgggaggcacggggggggcgcccagcgccgcgcgccgggtgagtcgcgc
ccgcttcnnnnnnnnnnggtgcccggggcggggggcgggacggggcggcgggaggcctca
ncgcgcggccggctgtgtctgcaggtgctggccgagaagcggctgctgggcggcgcggac
gggcccccgcacctggtggccgtggtgccgctgcacgagggggcgcgcggcccggacgcc
ctgcgcctgctgcggagcaacgccgccaacctcgtggtctcggaggcggacggagcccgc
ggcttcacgctgctctgcccccggctgcggcagcgatggcgcttcgtcttggcgcctacc
agggacttccacgcggtgctagacctggccaaggttgcggactcgctgctgtttgtgctg
cacccagaggacggctgggacagcgcgggggagaactgcctctcttgcctcttcgcacag
gggcttcccagctgcgctcttgctgtccagggaatggctgatcttccaccaaagaagcag
acagaggctaagaagaagctgagcaaagccattgaaaagcgattcccagaggcaaagctt
ttccccttgaacacagaacaggaatctttgctgctgctgaggcatttggccgcccagaag
cagcggcaccttgctttccgtgacaggcgggcttacctgcttgcccatgccgctgagttt
gtgcccagccaggaaagtgacctggttggcaccttgaaggtatctggcttcattcgggga
cagcccctcaacgtgaacagccttgtgcacattgtgggacagggagacttccagatgagt
caggtcgatgcgcctccagaccctctgtgtctcaacccccgagcggctaaacgtccagag
aggaagggccaggatatggaaatacaggatgagcctggaaacagcgctgtccagatggag
gaggatgtgaaggtcttgatgaaggcggatcccagcaggcaagagctgctgcagtcggag
gtggttccggaccccatggagggggagcagacctggcctactgaggaggagctgaaggag
gcagaggaggctgtgaaggagagaaggaagacggtgaaggtccccaagggaacgtcgaag
taccaggctgcctggattgtggatgacgaagaagatggcagtgaggaagatgaagatggt
gacagcatggaggaggatgacttgatggaggaagaggcttttcaggatggggagagcagt
gaggaggaggaggagcccgtggaggacgagtgcgagaccatgactctgccagagtctgcc
cgtgacgaccagtatgacgagagggtggaggaggatgagcaggtgctggagaagtacagg
caggagcgaacagatgaaatgttcccagacgaggtggacacgccccgnnnnnnnnnngcc
agagtccgcttccagaagtacagggggctcaagagcttccggacctcaccatgggatccc
aaagaaaacctccccagggattacgccaggatcttccagttccaggacttctcctgaacc
aggaagcatgtcttccggcagttggagaaggaagagatcgatggagctgcggttggctgg
tacgtgacacttcacatctccagtgttcctgtgtctgtaatggagagtttcaggcagggg
aagccattggtcctattctcactgcttccccacgagcagaagatgtccgtgttgcacttc
ctggtgagacggcacccaggcaacgtggagccagtgaaggccaaggaggagctgatcttc
cactgtgggttcaggcgcttccgggcctcggccctgtactcccagcacacctcaggtggg
cagggtctgcagccacgtggagcacaggggagctgcatgtag
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