Alligator mississippiensis (American alligator): 102567409
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Entry
102567409 CDS
T03087
Symbol
MED1
Name
(RefSeq) mediator complex subunit 1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amj03021
]
102567409 (MED1)
Transcription machinery [BR:
amj03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
102567409 (MED1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
102567409
NCBI-ProteinID:
XP_006275038
LinkDB
All DBs
Position
Un
AA seq
1582 aa
AA seq
DB search
MKAAQGGAEEAEKLNKMSSLLERLHAKFNQNRPWTETVKLVRQVMEKRVVMNSGGHQHLV
SCLETLQKALKVSSLPAMTDRLESIARQNGLGSHLSANGTECYITSDMFYVEVHLDSTGL
LCDVKVAHHGENPVSCPELVQHLREKNFDEFSKHLKGLVNLYKLPGDNKLKTKMYLALQS
LELDLIKMASMYWQATNASPLDKILHGSVGYLTPRSGGHLMNLKYYISPYDLFEDGTRAP
IALHDNNVPRSLGLNVSVTIEGTLAMYKLPIAPLIMGSHPVDNKGTPSFSSVTSANSVDL
PACFFLKFPRPIPVSQAFIQKLQSCTGIPLFDTPPAFVPLYELITQFELSKETDSVPLNH
NMRFYAALPGQQHCYFLNKDAPLPDGRSLQGTLISKIAFQHPGRVPLILNLIRHQVAYNT
LIGSCVKRTVLKEDSPGILQFEVCPLSDSCFSVSFQHPVNDSLVCVVMDVQDSTHVNCKL
YKGLSDALICTDDFIAKVVQRCMSIPVTMRAIRRKAETIQADTPALSLIAETVEDMVKKN
LPPASSPGYGMTTGSNPMSGTTTPTNTFPGGPITTLFNMSMSMKERHDSVGHGEDFSKVS
QNPILTSLLQITGNVGSAIGSSPTPPHHTPPPVSSPASNTKNHPMLMNLLKDNPPQDFST
LYGSSPLERQNSSSGSPRMEMGPGGNKQKKKKSRIPADKPKHQTEDDFQRELFSMDVDSQ
NPIFDVNMTADTLDTPHITPAPSQCSTPPTTYPQSIPHPQPSIQRMVRLSSSDSIGADVT
DILSDIAEEASKLPSTNDDCPPIGTPVRDSSSSGHSQSALFDPDVFQTNNSENPYTDPAD
LIADAAVSPNSDSSNHFFPDGVDFNPDLLNSQSQSGFGEEYFDESSQSGDADDFKGYAPQ
PLSTLGVQVLGGDGGENKFKGSSQADTVDFSIIASASKALGSSDIMEHHSGSQSPLLSTG
DLGKEKPQKRVKEGNGSGSSLSGPGLDGKPGKRSRTPSSDGKSKEKLPKRKKADTEGKSP
SHSTSNRPFTPPASTGGSKSPGSSGRSQTPPGVATPPIPKITIQIPKGTVTVGKPSSHGQ
YTSSGSVSSSSSKSHHSHSSSSSSSSSSTSGKIKSSKSEGSSGSKMSSSLYSSQGGSGSG
QSKSSAQSVGKPGSSPITKHGLSSSSGGTKMKPQGKPSSLMNPSMSKPNISPSHSRPSGG
SDKLASPMKPVPGTPPSSKAKSPISSGSGGSHMSGTGSSSSMKSSSGMGSSGSMSQKPPP
SSNSSTASSSSFSSSGSSMSSSQNQHGSSKGKSPSRNKKPSLTAVIDKLKHGVVTSGPGG
EDPMDGQMGPSSNSSSHTMSSKHNMSGGEFQGKREKSDKDKSKVSVSGGSVDSSKKTSDS
KNVGSTGVAKIIISKHDGGSPSIKAKVTLQKPGEGGGDSLRPQMASSKSYGSPLISGSTP
KHERCSPSHSKSPAYTPQNIDSESESGSSIAEKSYQNSPSSDDGIRPLPEYSSEKHKKHK
KEKKKVKDKDRDRERDRDKDRDKKKSHSIKPESWSKSPISSDQSLSMTSSGILSADRPSR
PSPDFLIGEEDDDLMDVALIGN
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcggctcaggggggcgctgaggaagcagagaagctgaacaagatgagttctctc
ttggaaagacttcatgcaaagtttaaccagaacagaccttggactgaaactgtgaagctt
gtccgtcaagtcatggaaaaacgtgttgtgatgaactccggagggcatcaacatctggtg
agctgtttggagactttgcagaaggcattgaaagtatcatcccttcccgccatgacagat
cgcttggaatctatagctagacagaatggccttggatctcaccttagtgcaaatggcact
gaatgttacatcacttcagacatgttctatgtggaagtccacttagattctacagggctg
ctgtgtgatgtcaaggtggctcaccatggagaaaatcctgtgagctgtccagagctggtg
caacatctgagagagaaaaactttgatgaattctctaagcatctgaaaggacttgtgaac
ctgtataaattgccaggagacaacaagcttaaaactaaaatgtacttggctctacagtcc
ttggagctggatctcattaagatggcatcaatgtattggcaagctaccaacgcaagtccc
cttgacaagattttgcatggcagtgttgggtatctcaccccacgaagtggaggtcatctt
atgaacctcaagtattacatttccccatatgatctgtttgaagatggtaccagggccccc
attgctctacatgataacaatgttcctcggtctttaggcttgaatgtatcagtaacaatc
gaaggaaccttagcgatgtacaaactccccattgcaccattaattatggggtcccatcct
gttgacaacaaagggactccatccttttcatcagtcaccagtgccaacagtgttgatttg
ccagcatgcttcttcttgaagttcccacgacctattccagtatcccaagctttcattcag
aaacttcagagctgcacaggaattccattgtttgacaccccaccagcatttgtccccctg
tatgagctgattacacaatttgagttatccaaggagacagattctgtacctttaaaccac
aacatgcgcttctatgcagctcttccagggcagcagcactgctatttcctgaacaaggat
gctcctctaccagatggcagaagtctacaaggaaccctcattagtaaaattgccttccaa
catcctggcagggtccccctcatcctcaatttgatcaggcatcaagtggcctacaacacg
ctgattggtagttgtgtcaagcgaactgttttaaaagaagattctcctgggatcctgcaa
tttgaagtgtgtcctctttctgattcctgtttcagtgtatcctttcagcatcctgtgaat
gattcccttgtgtgtgtggtaatggatgtgcaggattccacacatgtgaactgtaaacta
tataaagggctctctgatgctctcatctgtacagatgacttcattgccaaagttgttcaa
agatgtatgtccattcctgtgaccatgagagctattcgtaggaaagcagaaaccattcag
gcagatactcccgccctgtccctcattgcagagacagtagaagatatggtgaagaaaaac
cttcccccagccagcagccccgggtatggcatgaccacaggcagcaacccaatgagtggt
accaccacaccaacaaacacttttcctggggggcccatcactaccttgtttaatatgagc
atgagcatgaaagagaggcatgactcagtgggccatggggaggacttcagcaaagtgtct
cagaacccaattctcactagtttgttgcagatcacagggaatgtgggctctgccattggc
tcaagtccaacccctccccatcacacaccaccaccagtatcctcaccagcaagcaacacc
aagaaccaccccatgctcatgaaccttcttaaagacaatccccctcaggatttctccact
ctgtatgggagcagccctctcgaaaggcagaactcgtcttctggctcccccagaatggaa
atgggccctggggggaataagcaaaagaaaaaaaaatcacgcataccggcagacaagccc
aagcatcagactgaggatgattttcagagagaactgttttcaatggacgttgattctcag
aacccaatttttgatgtcaacatgaccgcagatacactggatacccctcatattactcca
gcgcccagtcagtgtagcactccacctactacatacccacagtctatacctcacccacag
cccagtattcagaggatggttcggctttccagttcagacagcattggagctgatgttact
gatatcctttcagatatagcagaggaggcttccaagctacccagtactaatgatgactgt
ccgcccatcggtactccagtaagagactcttctagttcaggacattcacaaagtgccctc
tttgacccagatgtgtttcagacaaacaatagtgagaacccatacactgatccagcagac
cttatagcagatgctgccgtgagccccaacagtgattcttcaaatcattttttcccagat
ggagtagatttcaatcctgacttactgaacagtcagagtcaaagtggttttggggaggag
tactttgatgagagcagccagagtggagatgctgatgattttaagggctatgcaccccag
cctctaagtactttaggagtgcaagtgttggggggtgatggaggagaaaataaatttaaa
ggaagcagtcaggcagacacagttgactttagtattattgcatctgcgagcaaagcactg
gggtcctctgacattatggagcatcacagtggaagccagagccctttattaagcacagga
gatttgggaaaggaaaagcctcagaaacgggtaaaggaaggcaatggttctgggagtagc
ttatcagggcctgggctagatggtaagccaggaaaacgcagccggaccccctctagtgat
ggtaaaagtaaagaaaagcttccaaaacggaagaaggcagacacagaagggaagtctcca
tctcacagtacatctaacaggcctttcactccaccagcaagcacaggtgggtcaaaatct
cctggaagttcaggcagatcccagactccccctggggtagctactcctcctattccaaaa
atcacaattcagatcccaaaagggacagtgactgttggcaaaccttcttcgcatggacag
tatacaagtagtggctcagtctcctcctcgagcagcaaaagccatcatagccattcctcc
tcttcttcctcctcctcttcttccacctcaggcaaaataaaaagcagcaaatctgaaggg
tcttctggctcaaagatgagcagcagcctctactcaagccagggtggctctggttcagga
cagtcgaaaagctcagctcagtccgtgggaaagcctggatcctctcccatcaccaaacat
ggcctcagcagcagttctggaggtactaagatgaaacctcaaggaaaaccttcatcgctt
atgaacccttcaatgagtaaaccaaacatttctccttctcattctagaccttcagggggt
tctgacaagcttgcctctccaatgaaacctgttcctggtactcccccatcatcgaaagca
aaatcacctatcagttcaggttctggaggttcgcatatgtctgggacgggatcaagctca
agtatgaagtcttcttcaggaatgggttcctctggatccatgtcccagaaaccaccacct
tcatcaaactcttcaacagcatcttcatcttccttttcatcgagtggttcttccatgtct
tcatctcaaaaccagcatggaagctccaaaggcaaatctcccagcagaaacaagaagcca
tctctgactgcagtcatagataaacttaaacatggggttgtcactagtgggcctggtggt
gaagatccaatggatggacagatggggccgagttccaattcctcaagccatactatgtcc
tccaaacacaacatgtctggaggcgagttccaggggaagcgggagaaaagtgacaaagac
aaatctaaagtctctgtttccggaggatctgttgactcttccaaaaagacttcagattcc
aaaaatgttggaagcactggtgtggccaagattatcatcagcaaacatgatggtggctcc
cctagcattaaagccaaagtaaccttgcagaaacccggggaaggtggtggggatagcttg
cggcctcagatggcctcttccaaaagctatggctcccctttgatcagtgggtctactcca
aagcatgaacgttgctcacccagccacagtaagtcaccagcatatactccccaaaacata
gacagtgagagcgagtctggctcctccatagcagagaaatcctatcagaacagccccagc
tctgatgatggaattaggcctctgccagaatatagctcagaaaagcataagaagcacaaa
aaagagaagaagaaagtgaaagacaaagatcgtgacagagagagggatcgtgacaaggac
agagacaagaagaagtctcatagcattaaaccagaaagctggtctaaatcacctatttct
tctgaccagtctctgtccatgacgagcagtggtattctgtcagctgataggccatctcgg
ccaagccccgatttcttgattggggaggaagatgatgacctcatggatgttgctctaatt
ggcaattaa
DBGET
integrated database retrieval system
