Alligator mississippiensis (American alligator): 102569632
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Entry
102569632 CDS
T03087
Symbol
UPF3A
Name
(RefSeq) UPF3 regulator of nonsense transcripts homolog A (yeast)
KO
K14328
regulator of nonsense transcripts 3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
amj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102569632 (UPF3A)
03015 mRNA surveillance pathway
102569632 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102569632 (UPF3A)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102569632 (UPF3A)
mRNA cycle factors
P-body specific factors
102569632 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
102569632
NCBI-ProteinID:
XP_006268616
LinkDB
All DBs
Position
Un
AA seq
505 aa
AA seq
DB search
MKSEREAAPGLGPMRGGGSGSGSGGGGGRDKRLMEPPLRRESPRREPETPPQPPPPSSSS
PLGPPLPPGPGKARDEKKTALSKVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTADPSL
YPHLYSRAYINFRNPEDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLKKKDA
KAGSIEDDPEYRKFLESYCADEEKICANPETLLGEIEAKTRELIARRTTPLLEYIKNRKL
EKQRIREEKREERRRRELEKKRLREEEKRKRREEERRKRKEAEKQKKIAEKEIRIKLLKK
PEKGDEQASEKHKEKGEEADIEEGKWEKSSGSGSIKSKSLEGPLKELKEKSQNDSDKEQR
DLERRFREKEPERQRYRLDDGRKHRAHYEFDKFVRRNEEELKWGKGYNQDRGKKGNHNYS
FTVEAVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQPGARIRTHTGSTNKTYDCYGKFS
EDTCDRKYEADNLTGGGSEKSEEAE
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcggagcgggaggctgcgccggggctggggcctatgcgtggcggcggcagcggt
agcggtagcggtggaggtggagggcgggacaagcgactcatggagcctccgctccgtcgg
gaatcgccgcgccgagagcccgagaccccgccccaaccgccgccgccgtcctcctcctcc
cccctggggccgccgctgccgccgggcccgggaaaagcgcgggacgagaagaaaactgcg
ctgagcaaagtagttattcgccggcttcctccttgcctaactaaagagcagctggaggag
cagctgcatcctctacctgcccatgattattttgaattttgcactgctgatcccagcctt
tatccacatctctactccagagcatacattaactttagaaatcctgaggacatccttctt
tttagagatcgatttgatggctatgtcttcattgataataaaggtttggaatatcctgct
gtggtagaatttgcaccattccaaaagatttcaaaaaagaagctaaagaaaaaagatgcg
aaagctgggagcattgaagatgatccagaatatagaaaatttttagaaagttattgtgcc
gatgaagagaaaatctgtgccaatcctgagactctgttgggagagattgaggcaaaaaca
agggaactcattgctagaagaacaacacctcttttggaatatattaaaaatagaaaatta
gaaaagcagaggatacgggaagagaaaagagaagaacggaggagaagggaactggaaaag
aaacgtctgagagaagaagagaaaagaaagcgcagagaagaagaaagacgtaaaagaaaa
gaagcagagaagcaaaagaaaattgctgaaaaagaaataaggatcaagcttcttaagaag
cctgaaaagggagatgaacaggccagtgaaaaacacaaggaaaaaggggaagaagctgat
attgaagaaggcaaatgggaaaaatcatctggatctgggagtataaaatccaagtcattg
gagggtccattaaaggaacttaaggaaaagtcacaaaatgatagtgataaagagcaaagg
gatttggagagaagatttcgagaaaaagaacctgaaagacaaaggtatcggttggatgat
ggcagaaagcatagagcgcactatgagtttgacaagtttgtgagaaggaatgaagaagag
ctgaaatgggggaaaggatacaaccaagacagaggaaagaaagggaaccacaactacagc
ttcactgtggaggcagtagacaaactgggtaaagaggacaagtgtgatgacatggcatcc
aaaaaggagcgcataagaaataaggatcgtccagccatgcagttataccagcccggagct
cgcattcgaacacatacggggtctacaaataaaacctatgactgctatgggaagttctct
gaagatacctgtgatagaaaatatgaggcagataatttaactggaggtggttctgagaag
agtgaagaagcagaataa
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integrated database retrieval system
