Alligator mississippiensis (American alligator): 102571689
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Entry
102571689 CDS
T03087
Symbol
SAMHD1
Name
(RefSeq) SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03250
Viral life cycle - HIV-1
amj04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
102571689 (SAMHD1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
102571689 (SAMHD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102571689 (SAMHD1)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
102571689 (SAMHD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HD
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
102571689
NCBI-ProteinID:
XP_019356237
LinkDB
All DBs
Position
Un
AA seq
512 aa
AA seq
DB search
MKVFNDPIHGHIEIHPLLIRIIDTPQFQRLRYIKQLGGTYFVFPGASHNRFEHSLGVGYL
AGCLVRALKEKQPELEINQRDILCVEIAGLCHDLGHGPFSHMFDGRFMPLVRPGLKWKHE
TASVQMFEHLITSNDLGKVMENYGLVLSEDMDFIKEQIGGPIDETTCENPWPYRGRPREK
SFLYEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFVRVCEVKRQKYICTRDK
EVGNLYDMFHTRNCLHRRAYQHKVGNIIETMITDAFLKADPHIKIEGSDRKYYKISTAME
DMEAYSKLTDNIFLEILHSSCPELAEAREILYKIEQRQLYKYVGETKPKKGKEIEKEEYD
TLPVDVAAAKPENIPHDMELKAEDFIVDVINMDYGMKEQNPIDNVRFYCKSDPSQAIKIT
KEQVSRFLPETFEEQLIRVYCKKTDEKSLNAAIQYFVQWCINRDFTKPQDGDVVAPLLTP
MKASWKNTEEDELEGPSECKKASKSRTRLFNN
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtttttaatgatcctattcatggtcatattgaaatacatcctctgctcattcga
atcattgatacgcctcagtttcaacgtctgcgatacattaagcaactgggtggcacttac
tttgtttttccaggagcgtcgcataaccgctttgaacattccctgggtgtaggatatctg
gctggatgtctggtacgagcactaaaagaaaaacagccagaactggagatcaaccagaga
gacattctctgcgttgagattgctgggctttgtcatgatttgggtcatggaccattttca
cacatgtttgatggaagatttatgccacttgttcgccctgggctgaaatggaagcatgaa
actgcttctgttcagatgtttgaacacctgattacttccaatgacctaggaaaagtcatg
gaaaactatggtcttgtcttgagtgaagatatggacttcatcaaagaacaaataggagga
cccatagatgaaacgacatgtgagaatccatggccttatcgtggtcgaccaagagagaaa
agcttcctttatgagatagttgctaacaaaagaaatgggattgatgttgacaaatgggat
tactttgcaagggattgtcatcacctaggaatccagaataactttgattataagcgcttc
cttaaatttgtgcgagtctgtgaagtaaaaaggcagaagtatatctgtacgcgtgataag
gaggttggaaatttgtatgatatgttccatacaaggaattgcttacaccgcagagcctac
caacacaaggttggcaacatcattgaaacaatgattacagatgctttcctaaaagcagat
ccccacattaaaatagagggttcagacagaaaatactacaagatttctactgcaatggaa
gatatggaagcctactctaaactaacagataacatctttctggagattttgcactccagt
tgtccagaactggctgaggcacgggaaattttgtataaaatagagcaacgtcaactatac
aagtatgtaggagaaactaagcctaaaaaaggaaaggaaattgaaaaggaggagtatgac
acgttgccagttgatgttgctgctgccaagccagaaaacatacctcacgatatggagttg
aaggctgaagacttcatagttgatgttatcaatatggattatgggatgaaagaacagaac
cctattgataatgttcgcttctattgcaagtctgatcctagccaggcaatcaagattact
aaagagcaggtttctaggtttctgccagagacctttgaggaacagcttatccgagtttac
tgtaagaaaacagatgagaagagtctcaatgctgcaatacagtattttgtgcagtggtgt
ataaacagagatttcactaaaccacaggatggtgatgtggttgcccctttgctaactcca
atgaaagcaagctggaaaaacactgaagaagatgaactagaaggtccaagtgaatgcaag
aaagcttcaaaatccagaaccagacttttcaataactga
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