Alligator mississippiensis (American alligator): 102572380
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Entry
102572380 CDS
T03087
Symbol
SORCS1
Name
(RefSeq) sortilin related VPS10 domain containing receptor 1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102572380 (SORCS1)
Membrane trafficking [BR:
amj04131
]
Protein recycling
Others
Others
102572380 (SORCS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
BNR_6
Motif
Other DBs
NCBI-GeneID:
102572380
NCBI-ProteinID:
XP_019341528
UniProt:
A0A151NUJ5
LinkDB
All DBs
Position
Un
AA seq
1021 aa
AA seq
DB search
MITLNGIVQVILILTKLYDYNLGSITESSLWRSTDYGTTYEKLNDKVGLKTILSYLYVCP
TNKRKIMLLTDPEIESSLLISSDEGATYQKYRLNFYIQSLLFHPKQEDWVLAYSQDQKLH
SSVEFGRRWQLLHEGVAPNRFYWSMMGSSKEPDLVHLEAKTPDGHAQYITCRVQNCTEAT
RSKPFPGYIDPNSLIVQDDYVFVQLTSGGRPHYYVSYRRNAFAQMKLPKYSLPKDMHVIS
TDENQVFAAVQEWNQNDTYNLYISDTRGVYFTLALENVKSSRGLEGNVMIDLYEVAGIKG
MFLANKKIDNQVKTFITYNKGRDWHLLQAPDTDLRGNPIHCLLPYCSLHLHLKVSENPYT
SGNIASRDTAPSIIVASGNIGAELSDNDISMFVSSDAGNTWRQIFEEEHSVLYLDQGGVL
VAMKHTSLPIRHLWLSFDEGRSWSKYSFTSIPLFVDGVLGEPGEETLIMTVFGHFSHRSE
WQLVKVDYKSIFDRRCAEEDYRPWQLHSQGEACIMGAKRIYKKRKSEKKCMQGKYARAMT
SEPCVCTEADFDCDYGYERHSNGQCLPAFWYNPSSLSKDCSLGQSYLNSTGYRKVVSNNC
TDGVREQYTAKPQQCPGKAPRGLRIVTSDGKLTAEQGHNVTFMVQLEEGDLQRSIIQVDF
GDGIAVSYANLSSTEDGIKHVYQNVGIFRVAVQVDNSLGSDNAVLYLHVTCPLEHVHLSL
PFVTTKNKEVNATAVLWPSQVGTLTYVWWFGNNTEPLITLEGSITFAFSVEGMNTITVQV
SAGSTILQDTKTIAVYERFQSLRLSFSPNLDDYNPDIPEWRRDISRVIKRALVEATGIPS
KHVLVAVLPGLPTSAELFILPYQDTTGENKKTAEDLEQISEILIHKLNQNFVQFELKPGV
RILVHAAHLTAAPLVDLTPSHSGSAMLMLLSVVFVGLAVFVIYKFKRKIPGINVYAQMQN
EKDQEMVSPVSPRESMPNVPQNGLMSPEQLVAEKLDTQAIGSISIAAETQSTKEIPTYVN
V
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccttgaatggcatcgtgcaggtgattctaattctgacaaagctgtatgactac
aacctggggagcatcacagagagctcactttggaggtcaacagattacgggacaacatac
gagaagctgaatgataaggttggcctgaagactattctgagctacctgtatgtgtgccca
acgaacaaacgcaagattatgttgctgactgacccggagattgagagcagcttgttgatc
agctctgatgaaggggccacttaccagaagtaccggctcaacttttacatccagagcctg
ctcttccaccccaagcaggaagactgggttctggcctacagtcaagatcagaagttacac
agttcagtggagtttggcagaagatggcagcttctccacgagggagttgcaccaaatagg
ttctactggtccatgatgggttccagtaaagagccagaccttgtacacctagaagccaag
acaccagatggccatgctcaatacatcacctgccgggtgcagaattgcacggaagccacc
cggagcaagccgttcccaggctacattgaccccaactccctgattgtccaggatgattat
gtgtttgttcagttaacatcaggaggacggccacattattatgtgtcctataggcgaaac
gcgtttgcacagatgaagctgccaaaatattctttgcccaaggatatgcacgttatcagc
acagacgagaatcaggtgtttgcagccgttcaagagtggaaccagaacgatacctacaac
ctgtatatatctgatacccggggggtctactttacactggccttggagaatgtcaagagt
agccgagggctggagggtaatgtgatgattgacctctatgaggtagcagggataaaggga
atgttcttggctaacaagaagattgacaaccaagtgaaaactttcatcacctacaacaaa
gggagagattggcatttgctacaggctcccgacactgatctgagaggaaaccctattcac
tgcctcctgccctattgttctctacatcttcatctgaaagtttcggagaatccctacacc
tctgggaacatcgccagccgagatactgcccctagcattatcgtggcttcaggtaacata
ggcgctgaattgtcagacaacgacatcagcatgtttgtttcgtccgatgctgggaacacc
tggagacagatctttgaagaggagcacagtgttttgtacttggatcaaggtggagtcttg
gtcgctatgaaacacacatctctgcctatcagacatctgtggttgagctttgacgagggg
agatcctggagcaagtacagcttcacatccatcccgctgtttgtcgacggcgtgttaggg
gagcctggagaggagactctgatcatgacagtgtttggacatttcagccaccgttcagaa
tggcagctggtgaaagtggactacaagtccatatttgacaggaggtgtgctgaagaggac
taccggccttggcagctccatagccagggagaagcatgcattatgggagcaaagaggatc
tacaagaagcgcaagtcagagaagaagtgcatgcagggaaaatacgccagggccatgaca
tcagaaccatgtgtctgcacagaagcagactttgactgcgattatggatacgagcgtcac
agcaatggccagtgtttaccagcattttggtataacccatcctccttatcgaaagactgt
agcctcggacagagttatctcaacagcaccgggtacaggaaagttgtgtctaacaactgc
accgatggcgtgagagaacagtatacagctaagccacagcagtgtcctggaaaggccccg
cggggacttcgcattgtcacctcggatggcaagctgacagcagagcaagggcacaacgtt
accttcatggtgcaactggaggagggagacctccagagatcgatcatccaggtggatttt
ggagacggcatcgctgtgtcgtacgccaacctcagttcgacggaggatgggatcaagcac
gtctaccagaacgtgggcatatttcgcgtagctgtgcaagtggacaacagcctgggatct
gacaacgctgtcctgtacttacatgtaacttgccccctggagcacgtccatttgtctctc
ccgttcgttacaacgaagaacaaagaggtcaatgccacggcggtgctgtggcccagccag
gttggcacgctcacttacgtctggtggttcgggaacaacactgagccgctgatcaccctg
gagggaagcatcacgtttgcattctccgtggaagggatgaacaccatcacggtgcaggtc
tcggcggggagcacgattctgcaggatacaaaaactattgcagtgtatgagcgattccag
tctctccggttgtccttctctccaaacctggacgactacaacccagatattccagagtgg
agacgggatatcagcagagtgatcaagagagctctggtagaggctacggggattccaagc
aagcacgttctggttgcagtactccctggcttgcccacatctgctgagctcttcatttta
ccatatcaagataccacaggagaaaacaaaaagaccgcagaagacctagagcagatttcg
gaaatattgatccacaaactgaaccaaaacttcgtccagtttgagttgaagccaggagtt
cgaatccttgtccatgctgcacacttaacagcagctcctctggtggacctcactcccagt
cacagtggttcggccatgctgatgctgctctccgtggtgtttgtgggcctagccgtgttt
gtcatttacaagttcaaaaggaagatcccgggcattaatgtttatgcacagatgcagaat
gagaaagatcaagagatggtcagtccagtcagtccaagggaaagcatgcctaatgtccct
caaaatggactgatgagcccagagcaactagtagctgagaagctggatacccaggccata
ggaagtatttccatagctgctgagactcaaagcacaaaagaaatccctacctatgtaaat
gtttga
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