Alligator mississippiensis (American alligator): 102573718
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Entry
102573718 CDS
T03087
Symbol
TRIM56
Name
(RefSeq) tripartite motif containing 56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amj04121
]
102573718 (TRIM56)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
102573718 (TRIM56)
Ubiquitin system [BR:
amj04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
102573718 (TRIM56)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
DUF3583
YtxH
Motif
Other DBs
NCBI-GeneID:
102573718
NCBI-ProteinID:
XP_006261798
UniProt:
A0A151MKJ7
LinkDB
All DBs
Position
Un
AA seq
682 aa
AA seq
DB search
MAQASASLQDLIREDFLTCKICYELYTVPKILPCLHSYCQRCLELLLKDGALHCPECRLK
TEAPGGASTLKTNFFINSLLELFQLKHKRDLACTVCSDAQRTQPATARCLDCKDFLCQTC
TQGHCCSRLTLHHKVVKLEQFLAGEHDAEMRLLQELCCQDHQQEALRFFCDTCGAPICRD
CRMLDHFEHKVVSMASAVQRERPSVEQLIESLGGTIVGISEREKTVGVAMDTLEAAGENI
RETITKYVEDLSAYLHAQKDAALGELSAFLTQQMERYQQVKEELQNQRDKAISTREFSQR
ILDVGKDYEILHLEGMIRNRIQELQAYTPQELKSQVPKLTISWDEPTQLSKAAFFSLAFP
QQQPEGDVDAFEAGSERSVSLRDVFDDNINSSLDSEEDCCLSSDERVLSTPEASLSPCRR
HGLQPVCVFTFEVKQYPSYSKPSISGIAVLPHKDGYLLLDQANEEIRQYSIKGFLQKSIP
LPDDDRGFCGISVCGDTLACSSDTYLFFLTLDGKFLRKLRLRGSESSYALTSFKDSYVAV
SEGTLCSISLYSPSGHCVGRVKPPDYEDGKFLFVAVNAWEEFIVSDFVKKQVLILKKSGQ
ILNVLKAPHSPLSKPFSVCVNALGSIFVVDQFQVIQFSRDGRRGGEILSSQRQRKRPRVI
TVDLDGRLVLVREDCHVHVVWP
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcctccgcatcgctgcaggatttaatccgggaggatttcctgacctgtaag
atctgctacgagctgtacacggtgccgaagatcctgccgtgcctccacagctactgccag
cgatgcctggagctgctgctgaaggatggagccctgcactgccccgagtgccggctgaag
acggaggcccccggtggggcctccactctgaaaaccaacttcttcatcaacagcctcctg
gagctattccaactcaagcacaagcgcgacctggcctgcaccgtctgctccgacgcccag
aggacccagcctgccaccgcccgctgcctggactgcaaagacttcttgtgccagacctgc
acgcagggccactgctgctcccgcctcaccctgcaccacaaggtggtgaagctggagcag
ttcttggctggggagcacgatgccgagatgaggcttctgcaggagctgtgctgccaggac
caccagcaggaagcgctgcggttcttctgcgacacctgcggcgctcccatctgcagggac
tgccgcatgctggaccactttgagcacaaggtggtgtccatggccagcgccgtgcagcgg
gagcggccttctgtggagcagctgatcgagagcctggggggaaccattgttggcatctct
gagcgggagaagactgtgggggtggcgatggacacgctggaagctgcaggtgagaacatc
agggagacgatcaccaagtatgtggaagacctcagtgcctacctccacgcccagaaggac
gctgcactgggcgagctgtcagctttcctgacccagcagatggagaggtatcagcaggtg
aaggaggagctgcagaaccagagagacaaagccatcagcacgagggagttctcccagagg
atcctggatgtggggaaggactacgagatcctccatttggagggcatgataaggaacagg
atccaggagctccaggcatacaccccgcaggagctaaagagccaagtccctaaactgacc
atttcctgggacgagcctacgcagctctcaaaagcagcgttcttcagcctggcttttccc
cagcagcagccagaaggagacgtggacgcttttgaggctggcagcgagaggtctgtgtca
ctcagggatgtgtttgatgacaacatcaactcatcccttgactcagaggaggactgctgt
ctgagctctgacgagagggtgctttccacccctgaggcgagcctttccccatgcagaagg
catgggctgcagcctgtgtgtgtctttacctttgaggtaaaacaatacccctcttactca
aagcccagcatctcggggattgcagtcctgccgcacaaggacggctatctcctcctggac
caggcaaacgaagagataaggcagtacagcattaaagggtttctccagaagtcgatacct
ctgccggatgatgacaggggcttctgcggtatttcagtctgtggagacaccttggcctgc
tcctcagacacgtacctcttcttcttgacactggatggcaagttcctgcgcaagctgcgg
ctaaggggaagtgagtcctcctatgctctcacatccttcaaggactcctatgttgctgtc
agcgaggggacgctctgctccatctccctgtacagcccctccgggcactgcgtgggcaga
gtgaaacctccggattacgaggatgggaagttcttgtttgttgctgtcaatgcctgggag
gaattcatcgtctcagactttgtcaagaagcaggttctcatcctcaagaagtcagggcag
atcctcaatgtgctgaaggcaccgcactcaccactttcgaagccattcagtgtctgtgtg
aatgcactcggcagtatttttgtggttgatcagttccaggtgattcaattctcaagagac
ggcaggagagggggggagatactgagcagccagaggcaacggaagaggccccgggtcatc
accgtggatctggatgggcgcctcgtcctggtgcgggaagactgccacgtccacgttgtt
tggccttag
DBGET
integrated database retrieval system
