Alligator mississippiensis (American alligator): 106737440
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Entry
106737440 CDS
T03087
Name
(RefSeq) ubiquilin-1
KO
K04523
ubiquilin
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
106737440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
106737440
03051 Proteasome [BR:
amj03051
]
106737440
Membrane trafficking [BR:
amj04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
106737440
Proteasome [BR:
amj03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
106737440
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ubiquitin
GCP5-Mod21_N
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
106737440
NCBI-ProteinID:
XP_014461262
LinkDB
All DBs
Position
Un
AA seq
465 aa
AA seq
DB search
MLRIAKSRDVLGVEQEAPPAPRLIRVTVKTPRQMEPFMVPMDKGVKEFKEEVAARFSSPP
DRLVLIFVGRILKDHKTLSEHSIHEDATVYLVILSRGRRLDQPGHETVSSWHVPAVLPAQ
SSPPSRPSSVGSTAVSTDSLQHLISDLGLHTANFSDFQSQLRAHPEMMLRLLQDPFIQSR
LSQPDLMMELVTDDALKEEVMRRIPALARFPNMPELLRLALELSRRPAAVWEIMQSPSSA
LSYVASILSREKAEPSICSEDQGAAWKAAPKQLALGAGQGGLALNRSNLSAEIRHLFSQR
TAASIKPFQPLQGNKGVPGSHQDGSCTSLGGDVSSSMGQRCSIPDLGPTSTAAKSLLQQL
VKQLMKHLLSGPCTRRTRQMLPPDLERKGLQKASGEPQVREQPLSAAFLQQTCNLERPGA
VPNARDVQMLARIEQSLQMLADACRSPTVGYASRGGAEEHWGSSQ
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatagccaaatccagggacgtccttggagtggagcaagaggcacccccggca
ccccgactcatcagggtgacggtgaagaccccccggcaaatggagccgttcatggtaccc
atggacaaaggcgttaaggagtttaaggaagaagttgcggcccgcttctcttctcccccc
gaccggctcgtactcatattcgtcggccggattttaaaggatcacaagaccctgagtgag
cacagcatccacgaggacgccaccgtctacctggtcatcctgtcccggggcagacgcctg
gatcagcccgggcacgagaccgtctcctcctggcacgtgcctgctgttcttccagcccaa
agcagccccccgtccaggcccagctcggtgggcagcacagccgtcagcacagacagcctg
cagcatctcatcagcgacctcggcttgcacacggccaacttctccgacttccagagccag
ctccgggcccaccccgaaatgatgctccggctcctgcaggaccccttcattcagagcagg
ctttcccagcctgatctcatgatggagctggtcacggacgatgccctgaaggaggaagtg
atgaggaggatcccggcgctcgcccgcttcccgaacatgccggagctgctgcggctcgcg
ctggagctgtctcggcgtccggccgcggtgtgggaaatcatgcaaagccccagctcggcc
ttgagctacgtggcgagcatcctgagcagggagaaggcagagccgagcatctgctctgag
gatcagggagctgcatggaaagcagcccccaagcagctggctttgggagctggccaagga
ggcctggccctcaacagaagcaacctgagtgccgaaatcaggcaccttttctcccaacga
actgcagcgtcaataaagccgttccagcccctccaggggaataagggggttcctggatct
caccaggacggcagctgcacgagccttggtggtgatgtgagcagcagcatggggcagaga
tgcagcatcccggacctgggacccacatccacagcggcaaaaagcctcctccagcagctc
gtgaagcagctcatgaagcaccttctgtctggcccatgcacgaggcgcaccaggcagatg
ctcccccctgacttggagaggaaggggctccaaaaggcctctggggagcctcaggttcga
gagcagccgctctcagctgccttcttgcagcaaacgtgcaacctggagaggccgggagct
gtgccgaatgcaagagacgtgcagatgctggcccggattgagcagagtttgcagatgctt
gcagatgcttgcaggtctcccactgtggggtacgcctcccgtggaggggctgaggagcac
tggggcagctcccaatga
DBGET
integrated database retrieval system
