Ailuropoda melanoleuca (giant panda): 100464304
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Entry
100464304 CDS
T01329
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
aml04714
Thermogenesis
aml05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100464304 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
100464304 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
100464304 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100464304 (ARID1B)
03021 Transcription machinery [BR:
aml03021
]
100464304 (ARID1B)
03036 Chromosome and associated proteins [BR:
aml03036
]
100464304 (ARID1B)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Helix-turn-helix
ARID
100464304 (ARID1B)
Transcription machinery [BR:
aml03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
100464304 (ARID1B)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
100464304 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
100464304
NCBI-ProteinID:
XP_034525260
Ensembl:
ENSAMEG00000009707
LinkDB
All DBs
Position
10:99673822..100057121
Genome browser
AA seq
1829 aa
AA seq
DB search
MDPMVMKRPQLYGMGSNPHSQPQQSSPYPGGSYGPPGPQRYPISIQGRTPGAMGGMQYPQ
QQMPPQYGQQGVSGYCQQGQQPYYNQQPQPPHLPPQAQYLPSQSQQRYQPQQDMSQEGYG
TRSQPPLAPGKPNHEDLNLIQQERPSSLPVEVLASEDTAFGLKDLSGSIDDLPTGTEATL
SSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGPISP
ASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMAGTQRNPQMSQYGPQQTGPSMSP
HPSPGGQMHPGISSFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPGMGI
NANNQMHGQGPSQPCGAMPLGRMPSAGMQNRPFPGTMSSMTPSSPGMSQQGGPGMGPPMP
TVNRKAQEAAAAVMQAAANSAQSRPPYVRSPAYPSQSGAGGRPMFSSQHPNYGNSQAPMM
HQPDQYGQGSFPGMNQSGLMASSSPYSQPVNNSSGLMNTQAPPYSMTPNMVNSSAASMGL
ADMMSPGESKLPMPLKADGKEEGTPQPESKSKDSYSSQGISQPPTPGNLPVPSPMSPSSA
SISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKLWVDRYLTFM
EERGSPVSSLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSAASS
LKKQYIQYLFAFECKIERGEEPPPEVFSTADTKKQPKLQPPSPANSGSLQGPQTPQSTGS
NSMAEVPGDLKPPTPASTPHGQMTPMQGGRSSAVSVHDPFSDASDSSFPKRNSMTPSAPY
QQGMSMPDVMGRMPYEPNKDPFGGMRKVPGSSEPFMTQGQMPTSSMQDMYNQSPSGAMSS
LGMGQRQQFPYGTSYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGLYPQQPNYKRHMDGMY
GPPAKRHEGDMYNMQYGNQQQELYNQYGSSYSGPDRRPLQGQYPYPYNRERMQGPGQLQP
HGIPPQMMGGPMQSSSSEGPQQSMWATRNDMPYPYQNRQGPGGPAQAPPYPGMNRTDDMM
VPDQRINHESQWPSHVSQRQPYMSSPASMQPITRPPQSSYQTPPSLPNHISRAPSPASFQ
RSLESRMSPSKSPFLPSLKMQKVLPTVPTAQVTGPPPQPPPIRREITFPPGSVEASQPVL
KQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFSLSQLSGFL
ELLVEYFRKCLIDIFGILTEYEVGDPSQKALDHNAVQRDDSQALADDSGKEEEDAECIDE
EEEEDEEEEEDSGKTETEEKSSGALASPNATADPKEKPRQASKFDKLPIKIVKKNNLFVV
DRSDKLGRVQEFSSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRPPPPVSSTGRKKEQE
GKGEADEQQEKSIIATIDDVLSARPGALPEDANPGTQTESSKFPFGIHQAKSHRNIKLLE
DEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILGKLIL
LHHEHPERKRAPQTYEKEEDEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLDLSAY
TESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNVDLIL
ATPPFSRQEKFYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSIGNLI
SFLEDGVTMAQYQQSQHNLLHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFLLHEG
RLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5490 nt
NT seq
+upstream
nt +downstream
nt
atggatcctatggtgatgaagagacctcagttgtatgggatgggcagtaaccctcattct
cagcctcagcagagcagcccttacccgggaggctcctatggccccccaggccctcagcgg
tatccaatcagcatccagggtcggaccccaggggccatgggaggaatgcagtacccacag
cagcagatgccacctcagtatggacagcaaggtgtgagtggttactgccagcagggccag
cagccttactacaaccagcagccgcagcctccgcacctccctccgcaggcacagtacctg
ccgtcccagtcccagcaaaggtaccagccgcagcaggacatgtctcaggaaggctatgga
actaggtctcaacctcctttggctcctggaaaacctaaccatgaagacttgaatttaata
caacaagaaagaccatcaagtttaccagttgaagtcttggcctcggaggataccgccttt
ggactcaaggacctgtctggctccatcgatgacctccccacgggaacggaggcaactcta
agctcagcagtcagtgcgtctgggtccacgagcagccaaggggatcagagcaacccggct
cagtcacctttctctccgcacgcatccccacatctctccagcatccccgggggcccatcg
ccttctcccgtcggctctcctgtgggcagcaaccagtcacgatctggcccgatttctcct
gcaagtattccaggcagtcagatgcctcctcagccacctgggagccagtcagaatccagt
tcccatcctgccttgagccagtcaccaatgccacaggaaagaggttttatggcaggcaca
caaagaaaccctcagatgtctcaatatggacctcaacagacaggaccatccatgtcgcct
catccttctcctggaggtcagatgcatcctggaatcagtagctttcagcagagtaactca
agtgggacttatggtccacagatgagccagtatggaccacaaggtaactactccagaccc
ccaacatatagcggggtgcccagtgcaagctacagcggcccagggcccggcatgggcatc
aatgccaacaaccagatgcatggacaagggccaagccagccatgtggtgctatgcccctg
ggacgaatgccatcagctgggatgcagaacagaccatttcctggaactatgagcagcatg
acccccagctctcccggcatgtctcagcagggagggccaggaatggggccgccgatgcca
accgtgaaccgtaaggcacaggaggcagccgccgcagtgatgcaggccgctgcgaactcg
gctcagagcaggccaccatacgttaggtcgcctgcttatcccagccagtctggggctggc
ggacgccccatgttttcttcccagcaccccaactatggcaactctcaggctcccatgatg
caccagcctgaccagtacgggcaaggcagttttccgggcatgaatcagagtggacttatg
gcttccagctctccctacagccagcccgtgaacaacagctctgggctgatgaacacccag
gcacccccctacagcatgacgcccaatatggtgaacagctcagcagcatctatgggtctt
gcagatatgatgtctcccggggaatccaaattgcccatgcctctcaaagccgacggtaaa
gaagaaggcactccacagcctgagagcaagtcgaaggatagctacagctctcagggtatt
tctcagcccccaacccccggcaacctgccagtcccttccccaatgtcccccagctctgct
agcatctcctcctttcatggagatgagagcgatagcattagcagcccaggctggccaaag
actccatcaagccctaagtccagctcatccaccactactggggaaaagatcacaaaggtg
tatgagttggggaatgagcccgagagaaagctatgggtcgacagataccttaccttcatg
gaagagagaggctcccctgtctcgagtctgcccgctgtgggcaagaagcccttggacctg
ttccggctctacgtctgcgtcaaggagattggaggtttggcacaggttaataaaaacaag
aagtggcgtgagctggcaaccaacctaaacgttggcacttcaagcagcgcggcaagctcc
ctgaaaaagcagtatattcagtacctgtttgcctttgagtgcaagattgagcgtggggag
gagcccccgccggaagtcttcagcaccgccgacaccaagaagcagcccaagctccagccg
ccctctcctgctaactcaggatccttgcaaggtccacagaccccccaatcaactggcagt
aactcgatggcagaggttccaggtgacctgaagccaccgaccccagcctccacgcctcac
ggacagatgaccccaatgcaaggtggaagaagcagtgcagtcagcgtgcacgacccattc
tcagacgccagtgattcatcattcccgaaacggaactccatgactccgagcgccccctac
cagcagggcatgagcatgcctgacgtgatgggaaggatgccctatgaacccaacaaggac
ccctttggtggaatgagaaaagtgcctggaagtagtgagccctttatgactcaaggacag
atgcccactagcagcatgcaggacatgtataaccaaagtccctctggagcgatgtccagt
ctgggcatggggcagcggcagcagtttccctacggaaccagttacgatcgaaggcatgaa
ccttatgggcagcagtacccaggccaaggccctccctcaggacagccgccatatggagga
caccagcccggcctgtatccacagcagccgaattacaaacgccatatggacggcatgtac
gggcccccggccaaacgccacgagggagacatgtacaacatgcagtacggcaaccagcag
caggagctgtataaccagtatgggagctcttactccggaccggacaggaggcccctccag
ggacagtacccctacccctacaacagagagcggatgcagggcccggggcagctccagccg
catggcatcccacctcagatgatgggcggcccgatgcagtcgtcctccagcgaggggcct
cagcagagcatgtgggcgacgcgcaacgatatgccttacccctaccagaacaggcaaggc
cccggcggccccgcccaggcacctccttatccaggcatgaaccgcacggatgatatgatg
gtacctgatcaaaggataaatcacgagagccagtggccttctcacgtcagccaacgtcag
ccttatatgtcctctcccgcctccatgcagcccatcacgcgcccgcctcagtcatcctac
cagacgccaccatcactgccaaatcacatctccagagcccccagccccgcgtccttccag
cgctccctggagagccgcatgtctccaagcaagtctccctttctgccctccctgaagatg
cagaaggtcctgcccaccgtccccacggcccaggtcacggggccgcccccccagccgccc
cccatcagaagggagatcacctttcctcctggctccgtcgaggcatcacagcccgtcttg
aaacaaaggcgaaagattacctcaaaagatatcgttactcctgaggcctggcgtgtgatg
atgtcccttaagtcaggtcttctggctgaaagtacttgggctctggacactattaacatt
ctcctgtatgatgacagcacggtcgctaccttcagtctctcccagttatccggatttctc
gaacttttagtagagtactttagaaaatgcctgattgacatttttggaattcttacggaa
tacgaggtgggagaccccagccagaaagcacttgaccacaacgcggtgcagagagatgac
agccaggcgttggccgacgattctgggaaagaggaggaagatgccgagtgtatcgatgag
gaagaggaggaggacgaggaggaggaggaggacagtgggaagacggagacagaggagaag
agcagcggggctctggcctctcccaacgccaccgcggatccaaaggagaagcccaggcaa
gcgagtaagttcgacaagctgccgataaagatagtcaagaagaacaacttgttcgtggtc
gaccggtctgacaagctgggtcgcgttcaggagtttagcagtggacttctgcactggcag
ctcggtgggggggacaccaccgagcacatccagactcactttgagagcaagatggaaatc
ccgcctcggaggcgtccgcctccacccgtgagctccacaggtcggaagaaagagcaggaa
ggaaaaggcgaggcggacgagcagcaagagaaaagcatcatcgcgaccattgatgacgtc
ctgtctgctcggcccggggcgctgccggaagacgcgaaccctggcacccagaccgaaagc
agtaagtttccctttgggatccatcaagccaaaagtcaccgcaacatcaagctgctggag
gacgagccaaggagccgggacgagactcctctctgcaccatcgcgcactggcaggattct
ctggccaagcgctgtatctgtgtgtcaaatattgtccgtagcttgtcttttgtgcctggc
aatgacgccgaaatgtccaaacatccaggcctggtgctgatcctggggaagctgatcctc
cttcaccacgagcatccggagagaaaacgagcgccgcagacctacgagaaagaggaagac
gaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgcctggaggtctta
agggataacacgttggtcacgttggccaacatttccgggcagctagacttgtctgcttac
acagaaagcatctgcttgccaattttggatggcttgctgcactggatggtgtgcccgtct
gcagaggcacaagacccctttcccactgtgggacccaactctgtcctgtcgcctcagaga
ctcgtgctggagaccctctgtaaactcagcatccaggacaacaacgtggacctgatcttg
gccacgcctccatttagccgtcaggagaaattctatgctacgttagttaggtacgttggg
gatcgcaaaaacccagtctgtcgagaaatgtccatggcgctcttatcgaaccttgcccaa
ggggacgcgctggcagcaagggcaatagctgtgcagaaggggagcattggaaacttgata
agcttcctagaggacggggtcaccatggcccagtatcagcagagccagcataacctcctg
cacatgcagcccccgcctctagagccaccgagtgtggacatgatgtgcagggcggccaag
gctctgctggccatggccagggtggacgagaaccgctcggaattcctcctgcacgagggc
cgattgctggacatctcgatatcagccgtcctgaactctctggttgcgtctgtcatctgt
gatgtactgtttcagatcgggcagttatga
DBGET
integrated database retrieval system
