Ailuropoda melanoleuca (giant panda): 100464617
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Entry
100464617 CDS
T01329
Symbol
SCN10A
Name
(RefSeq) sodium channel protein type 10 subunit alpha isoform X1
KO
K04842
voltage-gated sodium channel type X alpha
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aml04040
]
100464617 (SCN10A)
Ion channels [BR:
aml04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
100464617 (SCN10A)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
CcmD_alt
GPHH
Na_trans_cytopl
IQ
Motif
Other DBs
NCBI-GeneID:
100464617
NCBI-ProteinID:
XP_034517659
Ensembl:
ENSAMEG00000017646
LinkDB
All DBs
Position
6:36565656..36667939
Genome browser
AA seq
1959 aa
AA seq
DB search
MEFPFGSLETTNFRRFTPESLVEIEKRIAAKRAAKKAKDKHREQKDQEEKCRPQLDLKAC
NQLPKFYGELPAELVGEPLEDLDPFYSTHRTFMVLNKGRTISRFSATRALWLFSPFNLIR
RTAIKVSVHSYPLHWWFSLFITVTILVNCVGMTQTELPERIEYVFTVIYTFEALIKILAR
GFCLNEFAYLRDPWNWLDFSVITLAYIGEATDLRGISGLRTFRVLRALKTVSVIPGLKVI
VGALIHSVRKLADVTILTVFCLSVFALVGLQLFKGNLKNKCVKNCAALNETGNYSSYGKP
DFYYNKPGTSDPLLCGNGSDAGHCPQGYLCLKTSDNPDFNYTSFDSFAWAFLSLFRLMTQ
DSWERLYQQTLRASGKMYMVFFVLVIFLGSFYLVNLILAVVTMAYEEQNQATIDEIEAKE
KKFQEALEMLRKEQEVLAALGIDTASLHSHNGSPLASKNASERMHRMKPRVSEGSTDDNK
SPQSDPYNQRRMSFLGLTSGRRRPSHGSVFHFRAPCLDTSFPDGVTDDGVFPGDRESHRG
SLLLGGGAGQQGPLLRSPLPQPSNPGPGHGEDGHSTLSTGELAPGGIEVSAFDAGQKKTL
LSAEYLNEPFRAQRAMSVVSIMTSVLEEFEESERRCPPCLTSLAQKYLIWECCPTWVKLK
RLLFGIVTDPFAELTITLCIVVNTVFMAMEHHGMSAAFEAMLQIGNIVFTVFFTAEMVFK
IIAFDPYYYFQKRWNIFDCIIVTVSLIELGAAKKGSLSVLRTFRLLRVFKLAKSWPTLNT
LIKIIGNSVGALGNLTIILAIIVFVFALVGKQLLGDNYRDNRHNISAPNEEWPRWHMHDF
FHSFLIVFRILCGEWIENMWACMEVGQKSVCLILFLSVMVLGNLVVLNLFIALLLNSFSA
DNLAAPDEDGEVNNLQVALARIQAFGHSTRKAICSFLTRPCLLSWPKTEPQLVVKLPLSS
SKAENHIAADATVGSPRELPVSRGPRDDHNDFITNPNIWVSVPIAEGESDLDDLEEDGEE
DAQSSQQEVISQGQQEQLQQVERCESHMAPRSPGSGMSSEDAASHVGEKWKDKTAAQPPA
EGGDDTSSSEGSTVDCLDPEAILKKIPELADDLEEPDDCFTEGCLRHCPCCKVDTSKFPW
AMGWQVRKACYRIVEHSWFESFIIFMILLSSGSLAFEDHHLDQKPTVKALLEYTDRVFTF
IFVFEMLLKWVAYGFKNYFTSAWCWLDFLIVNISLTSLIAKILQYSDVASIKALRTLRAL
RPLRALSRFEGMRVVVDALVGAIPSIMNVLLVCLIFWLIFSIMGVNFFAGKFGRCINKTN
EYLSLVPLSIVNNISDCKDQNHTGSFFWVNVKVNFDNVAMGYLALLQVATFKGWMDIMYA
AVDARDVNLQPKWEDNVYMYLYFVIFIIFGGFFTLNLFVGVIIDNFNQQKKKLGGQDIFM
TEEQKKYYNAMKKLGSKKPQKPIPRPLNKYQGFVFDIVTRQAFDIVIMVLICLNMITMMV
ETDEQSEEKTKILNKINQFFVAVFTGECVLKMFALRHYYFTNGWNVFDFIVVVLSIGSLV
FSAILTSLENYFSPTLFRVIRLARIGRILRLIRAARGIRTLLFALMMSLPALFNIGLLLF
LVMFIYSIFGMASFPHVSWEAGIDDMFNFQTFANSMLCLFQITTSAGWDGLLSPILNTGP
PYCDPNLPNSNGSRGNCGSPAVGILFFTTYIIISFLIVVNMYIAVILENFNVATQESSEP
LSEDDFDMFYETWEKFDPEATQFITFSALSDFADALSGPLRIPKPNRNILIQMDLPLVPG
DKIHCLDILFAFTKNVLGESGELDSLKANIEEKFMATNVSKTSYEPIATTLRWKQEDISA
TVIQKAYRSYVLHRSMIISNPPGVPRAEEEAVLLPDVVVFMADENCTLPDKSETASTTSF
PPSYDSVTRGLSDQVNMSSSSSMQNEDETTSKKATAPGP
NT seq
5880 nt
NT seq
+upstream
nt +downstream
nt
atggaattcccctttgggtccctggaaactaccaacttccgtcgattcactccggagtcc
ctggtggagattgaaaagcgaattgccgctaagcgggcagcaaagaaagccaaagataag
cacagggagcagaaggaccaagaagagaaatgtcgaccccagctagacttgaaagcttgc
aaccagctgcctaagttctatggtgagctcccggcagagctggttggggagcccctggag
gatctggaccccttctacagcacacaccggacgtttatggtgctgaacaaagggaggacc
atttcccggtttagtgccactcgggccttgtggttattcagtcctttcaacctgatcaga
agaacagccatcaaagtgtctgtccactcatatcctttgcactggtggttcagtttattt
attacggtcactattttggtcaattgtgtgggcatgacccaaaccgagcttccagagaga
atcgagtatgtcttcactgtcatttacacttttgaagccttgataaagatactggcaaga
ggattttgtttaaatgagtttgcttacctgcgagatccttggaactggctggattttagt
gtcattaccctggcatacattggtgaagcaacagatctccgagggatctcaggcctgcgg
acattcagagttcttagagctttaaagacagtttctgtgatcccaggactgaaggtcatt
gtgggagctctgatccactcggtgaggaaactggcagatgtgactatcctaactgtcttc
tgcttgagtgtctttgccctggtgggcttacagctcttcaagggcaacctcaagaacaaa
tgtgtcaagaattgtgcagctctcaacgagacgggcaattactcctcttatggaaaacca
gatttctactataataaaccgggcacttcagatcccttactctgtggcaatggatctgat
gcaggccactgccctcaaggttatctctgtcttaaaacatctgacaaccccgattttaac
tacaccagctttgattcctttgcttgggctttcctgtcactgtttcgcctcatgacacag
gattcctgggaacgcctctaccagcagaccctgagggcttctgggaaaatgtatatggtc
tttttcgtgcttgtcatcttcttggggtctttctacctcgtcaacttgatcttggctgtg
gtcaccatggcatatgaggagcagaaccaggcaaccattgatgaaattgaagccaaggag
aagaagttccaagaggcccttgagatgctccggaaggagcaggaggtgctggcagcgctg
gggattgacacagcctctctccattcccacaatggatcacctttagcctccaaaaatgcc
agtgagagaatgcacagaatgaaaccaagggtgtcagagggctccacagatgacaacaaa
tcaccccaatctgatccttacaaccagcgcagaatgtctttcctaggcctcacctctggg
agacgcaggcctagccatggcagtgtgttccatttccgtgccccttgcctggatacctca
ttccctgatggggtcacagatgatggagtctttcctggagaccgtgagagccatcggggc
tccctgctgctgggtgggggtgctggccagcaaggccccctccttaggagtccactgcct
caaccctccaaccctggcccaggacatggagaagacggacactctacattgtccactggt
gagcttgcccctgggggcatcgaagtctcggcatttgatgcaggacaaaagaagactctc
ttatcagcagaatacttgaatgagcctttccgagcccaaagggcgatgagtgttgtcagc
atcatgacctctgtcctcgaggaattcgaggagtccgaacggaggtgcccgccctgcttg
accagcttggctcagaagtatctgatctgggagtgctgccccacgtgggtgaagctcaag
aggcttctctttgggattgtgacggacccctttgcggagctcaccatcaccttgtgcatt
gtggtgaatacagtcttcatggccatggagcaccacggcatgagcgctgccttcgaagcc
atgctccagataggcaacattgtctttactgtgttttttactgctgaaatggtcttcaaa
atcattgccttcgacccctactattacttccagaagaggtggaacatctttgactgcatc
attgtcactgtgagcctgatagagttgggtgcagccaagaaggggagcctgtcagtgctg
cgaaccttccgcttgctgcgggtcttcaagctggccaagtcctggccaaccttaaatacg
ctcatcaagatcattgggaactctgtgggggcattggggaatctcaccatcatcctggcc
atcattgtctttgtcttcgctctggttggcaagcagctacttggagataattaccgtgac
aaccggcataatatctctgcacccaatgaagaatggccacgctggcacatgcacgacttc
ttccactccttccttatcgtcttccggatcctgtgtggagaatggatcgagaacatgtgg
gcctgcatggaagttggccagaaatccgtatgcctcatccttttcttgtcagtgatggtg
ctagggaacctggtggtgctcaacctgttcattgccctgctactgaactccttcagtgct
gacaaccttgcagctccagatgaagatggggaggtgaacaacctgcaggttgccctggca
cggatccaggcatttggccatagtaccaggaaggccatttgcagcttcctcaccaggccc
tgcctgctgtcctggcccaagacagagccccagctggtggtgaaactcccactctccagc
tctaaagctgagaaccacattgctgctgatgcaactgtggggagccccagagagcttcca
gtgtccagaggcccaagagatgaccacaatgacttcatcaccaatcctaacatatgggtc
tctgtgcccattgccgaaggcgaatctgacctcgatgacctggaggaggatggtgaagag
gatgctcagagctcccagcaggaagtgatctctcaagggcagcaggagcagctgcagcaa
gtcgagaggtgtgagagccacatggcacccaggagcccaggctccggaatgtcgtctgag
gacgcggcttcccatgtgggtgagaagtggaaagacaagactgctgcccagccccctgca
gagggaggggatgatacgagctcctctgaaggcagcacagtggactgcctggatcccgag
gcgatcctgaagaagatccctgagctggcagatgaccttgaagaaccagatgactgtttc
acagaaggctgccttcgccactgtccctgctgtaaagtggacaccagcaagttcccttgg
gccatgggctggcaggtgcgcaaggcctgctaccgcattgtggagcacagctggtttgag
agcttcatcatcttcatgattctgctcagcagtgggtctctggcctttgaagaccatcac
cttgaccagaagcccacggtgaaggccttgctggaatatactgacagggtgtttacattt
atctttgtattcgagatgctgctcaagtgggtggcctatggcttcaaaaattacttcacc
agtgcctggtgctggctggacttcctcattgtgaacatctccctgacaagccttatagca
aagatcctgcagtattctgatgtggcatccatcaaagcccttcggaccctccgtgccctg
aggcccctgcgggctctgtctcgattcgaaggcatgcgggtggtggtagatgccctggtg
ggtgccatcccatccatcatgaatgtcctcctcgtctgcctcatcttctggctcatcttc
agcatcatgggtgtgaacttctttgcagggaagtttgggcggtgcatcaacaaaaccaac
gaatacctttctcttgtgcctttgtctattgtgaataacatatctgactgtaaagatcag
aaccacactggcagcttcttctgggtcaacgtgaaagtcaactttgataatgttgcaatg
ggttacctagcacttctgcaggtggcgacctttaaaggctggatggacatcatgtatgca
gctgttgatgcccgagatgtgaacttgcagcccaagtgggaagacaatgtgtacatgtac
ttatacttcgtcatcttcatcatttttggtggcttcttcacactcaatctcttcgttggg
gtcataattgacaacttcaatcaacagaaaaaaaagttagggggccaggacatcttcatg
acagaggagcaaaagaagtactacaatgccatgaagaagctgggctccaagaagccccag
aagcccatcccacggcccctgaacaagtaccagggctttgtctttgacattgtgaccaga
caagctttcgacattgttatcatggtcctcatctgcctcaacatgatcaccatgatggtg
gagactgatgagcagagtgaagaaaagacaaaaattctcaacaaaatcaatcagttcttt
gtggctgtcttcacgggcgagtgtgtcttgaagatgttcgccttgcggcattactacttc
accaatggctggaatgtgtttgacttcatcgtcgtggtcctctccattgggagcctggta
ttttctgcaattcttacgtcacttgaaaattacttctccccaacgctcttccgagtcatc
cgcctggcccgaattggtcgcatcctcaggctgatacgagcagccaggggaatccgcaca
ctgctctttgccctcatgatgtccctgcctgccctcttcaacataggactcctgctcttc
ctcgtcatgttcatctactctatctttggcatggccagcttcccccatgtaagttgggag
gctggcattgatgacatgttcaacttccagaccttcgccaacagcatgctgtgcctcttc
cagatcaccacatcagctggctgggatggcctcctcagccccatcctcaacacaggaccc
ccttactgtgaccccaatctgcccaacagcaatggctcccgagggaactgtgggagccca
gctgtgggcatcctcttcttcaccacgtacatcatcatctccttcctcatcgtggtcaac
atgtacattgcagtgattctggagaacttcaatgtggccacgcaagagagcagtgaacct
ctgagtgaggatgactttgacatgttctatgaaacctgggagaagtttgacccagaggcc
actcagtttattaccttttctgccctctcagactttgcagacgccctttcaggccccctg
agaatcccaaaacccaatcggaatatattaatccagatggacctgcccttggtccctgga
gataagattcactgtttggacattctttttgccttcactaagaatgttctgggagaatct
ggggagttggactctctgaaggcaaatattgaagagaagtttatggcaactaatgtatca
aaaacatcctatgaaccaattgcaaccaccctccgatggaagcaggaagacatttcagct
actgtcattcaaaaggcctatcggagctatgtgttgcaccgttccatgataatctccaac
cccccaggtgtgcccagggctgaggaggaggctgtgttactcccagatgttgttgtattc
atggcagatgaaaattgcacactcccagacaaatctgaaactgcatctaccacatctttc
ccaccatcctatgacagtgtcactagaggccttagtgatcaagtcaacatgagctcatct
agctcaatgcagaatgaagatgaaactaccagtaagaaagcaactgcccctgggccctaa
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integrated database retrieval system
