KEGG   Ailuropoda melanoleuca (giant panda): 100468194
Entry
100468194         CDS       T01329                                 
Symbol
CXCR4
Name
(RefSeq) C-X-C chemokine receptor type 4
  KO
K04189  C-X-C chemokine receptor type 4
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03250  Viral life cycle - HIV-1
aml03260  Virion - Human immunodeficiency virus
aml04020  Calcium signaling pathway
aml04060  Cytokine-cytokine receptor interaction
aml04061  Viral protein interaction with cytokine and cytokine receptor
aml04062  Chemokine signaling pathway
aml04144  Endocytosis
aml04360  Axon guidance
aml04670  Leukocyte transendothelial migration
aml04672  Intestinal immune network for IgA production
aml04810  Regulation of actin cytoskeleton
aml05163  Human cytomegalovirus infection
aml05170  Human immunodeficiency virus 1 infection
aml05200  Pathways in cancer
Brite
KEGG Orthology (KO) [BR:aml00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    100468194 (CXCR4)
   03260 Virion - Human immunodeficiency virus
    100468194 (CXCR4)
 09130 Environmental Information Processing
  09132 Signal transduction
   04020 Calcium signaling pathway
    100468194 (CXCR4)
  09133 Signaling molecules and interaction
   04060 Cytokine-cytokine receptor interaction
    100468194 (CXCR4)
   04061 Viral protein interaction with cytokine and cytokine receptor
    100468194 (CXCR4)
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    100468194 (CXCR4)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    100468194 (CXCR4)
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    100468194 (CXCR4)
   04672 Intestinal immune network for IgA production
    100468194 (CXCR4)
   04062 Chemokine signaling pathway
    100468194 (CXCR4)
  09158 Development and regeneration
   04360 Axon guidance
    100468194 (CXCR4)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100468194 (CXCR4)
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    100468194 (CXCR4)
   05163 Human cytomegalovirus infection
    100468194 (CXCR4)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:aml04030]
    100468194 (CXCR4)
   04050 Cytokine receptors [BR:aml04050]
    100468194 (CXCR4)
   04090 CD molecules [BR:aml04090]
    100468194 (CXCR4)
G protein-coupled receptors [BR:aml04030]
 Rhodopsin family
  Chemokine
   CXC Chemokine
    100468194 (CXCR4)
Cytokine receptors [BR:aml04050]
 Chemokine receptors
  CXC Chemokine
   100468194 (CXCR4)
CD molecules [BR:aml04090]
 Proteins
  100468194 (CXCR4)
SSDB
Motif
Pfam: 7tm_1 CXCR4_N 7TM_GPCR_Srsx DUF4538
Other DBs
NCBI-GeneID: 100468194
NCBI-ProteinID: XP_002927722
Ensembl: ENSAMEG00000019163
UniProt: G1MLH7
LinkDB
Position
2:complement(108609840..108613880)
AA seq 353 aa
MDAFRIYPSDNYTEDDLGSGDYDSMKEPCFREENAHFNRIFLPTVYSIIFLTGIVGNGLV
ILVMGYQKKLRSMTDKYRLHLSVADLLFVLTLPFWAVDAVANWYFGKFLCKAVHVIYTVN
LYSSVLILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVRE
ADGRYICDRFYPNDSWLVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSKGYQKRKALK
TTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFESTVHKWISITEALAFFHCCLNP
ILYAFLGAKFKTSAQHALTSVSRGSSLKILSKGKRGGHSSVSTESESSSFHSS
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggacgcgttccgtatatacccttcagataactacacagaagatgacttgggctcaggc
gactatgactccatgaaggaaccctgcttccgggaggaaaatgcccatttcaaccgtatc
tttctgcccacagtctactccatcatcttcttgacgggcatagtgggcaatggattggtc
atcctggtcatgggttaccagaagaaactgagaagcatgacagacaagtatagactacac
ctgtctgtggcagacctcctctttgtcctcacgcttcccttctgggcagttgatgctgtg
gccaactggtactttggaaagttcctgtgcaaggcagtccatgtcatctatacagtcaac
ctctacagcagtgtccttatcctggccttcatcagtctggaccggtacttggctattgtc
catgccaccaacagtcagaggccaaggaagctgttggctgaaaaggtggtctatgttggc
gtctggatacctgctctcctgttgaccattcctgatttcatctttgccaatgttagggag
gcagatgggaggtatatctgtgaccgcttctatcccaacgactcgtggttggtggtgttc
cagtttcagcacatcatggttggccttatcctgccaggcatcgtcatcctgtcctgctac
tgcattatcatctccaagctgtcccactctaagggctaccagaagcgcaaggccctcaag
accacagttatcctcatcctggctttcttcgcctgctggctgccctactacattgggatc
agcatcgattccttcatcctcctggaaatcatcaagcaaggatgtgagtttgagagcact
gtgcacaagtggatttccatcactgaggccctagcctttttccactgttgcctgaacccc
atcctctatgccttccttggagccaaatttaaaacctctgcccaacatgcactcacctct
gtgagcagagggtccagcctcaagatcctttccaaagggaagcggggaggacattcttct
gtttcaaccgaatccgagtcttcaagttttcattccagctaa

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