Ailuropoda melanoleuca (giant panda): 100472163
Help
Entry
100472163 CDS
T01329
Symbol
OPN4
Name
(RefSeq) melanopsin isoform X1
KO
K04255
r-opsin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
aml04030
]
100472163 (OPN4)
G protein-coupled receptors [BR:
aml04030
]
Rhodopsin family
Vision
Opsin
100472163 (OPN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srv
7TM_GPCR_Srx
Motif
Other DBs
NCBI-GeneID:
100472163
NCBI-ProteinID:
XP_019651037
Ensembl:
ENSAMEG00000009912
LinkDB
All DBs
Position
6:87590727..87602449
Genome browser
AA seq
481 aa
AA seq
DB search
MNPPSGPRAQEPSCVATPASPSRWDSSRSSTSSPGQALPTAAGARAAAWVPFPTVDVPDH
AHYTLGTVILLVGLTGMLGNLMVIYTFCRCLVGGTRAWALTRGLRTPSNMFIINLAVSDF
LMSFTQAPVFFASSLHKRWLFGEAGCEFYAFCGAVFGITSMVTLMAIALDRYLVITHPLA
TIGVVSKRRAALVLAGVWLYALAWSLPPFFGWSAYVPEGLLTSCSWDYLSFTPSVRAYTM
LLFCFVFFLPLLVIIYCYVFIFKAIRETGQALQTFRACEGGVRSPRQRQRLQREWKMAKI
ELLVILLFVLSWAPYSTVALMGFAGYAHVLTPYMNTVPAVIAKASAIHNPIIYAITHPKY
RMAIAQHLPCLGVLLAVSDQRGGPYASYRSTHRSTLSSQASDLSWISGQKRQASLGSESE
VGWMDTEAAAVWGAARQVSGHFPCSQGLEDMEAKAPLRPQGQEAETPGKTKGLLPSLNPR
M
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctccttcgggacccagagcccaggagcccagctgtgtggccaccccagcctca
cccagcaggtgggacagctcccggagcagcacctccagcccgggccaagctctgcccacg
gcagccggggctcgggctgctgcctgggtccccttcccaacggtggatgttccggaccac
gcccactacaccctgggcacagtgatcctgctggtggggctcacggggatgctgggcaat
ctgatggtcatctataccttctgcaggtgcctggttggcgggactagggcgtgggcactg
accagaggcctcaggacgccatccaacatgttcattatcaacctcgcggtcagtgacttt
ctcatgtccttcacgcaggcccccgtcttcttcgccagcagcctccataagcggtggctc
ttcggggaggcaggctgcgagttctatgccttctgtggggctgtcttcggcatcacctcc
atggtcaccctgatggccatcgctctggaccgctacctggtgatcacgcacccactggcc
accatcggggtggtgtccaagaggcgggcggcgcttgtcctggcgggcgtctggctctat
gccctggcctggagtctgccgcccttctttggctggagcgcctacgtacccgaggggctg
ctgacgtcttgctcctgggactacctgagcttcacgccgtcagtgcgagcctacaccatg
ctgctcttctgctttgtgttcttcctccccctgctggtcatcatctactgctacgtcttc
atcttcaaggccatccgggagacaggccaggctctccagactttcagggcctgtgagggc
ggtgttaggtctcctcgacaacggcagcggctacagagagagtggaaaatggccaagatt
gaactgctggtcatccttctcttcgtgctctcctgggccccctactccactgtggccctg
atgggctttgctgggtacgcacatgtcctgactccctacatgaacacagtgcctgctgtc
atcgccaaggcttctgccatccacaaccccatcatttacgccatcacccaccccaagtac
agaatggccattgcccagcacctgccctgcctgggggtgctgctggccgtgtcggaccag
cgcggtggcccctacgccagctaccgctccacccaccgctccacactgagcagccaggcc
tcagacctcagctggatctccggacagaagcgtcaggcgtccctgggctcggagagtgag
gtgggctggatggacacggaggcagcggccgtgtggggggctgcccggcaagtgagcggg
cacttcccctgcagtcagggcctggaggacatggaagccaaggcccctctcaggccccag
gggcaggaagcagagactcctgggaagaccaaggggctgctccccagcctgaaccccagg
atgtag
DBGET
integrated database retrieval system
