Ailuropoda melanoleuca (giant panda): 100474039
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Entry
100474039 CDS
T01329
Symbol
TRAIP
Name
(RefSeq) E3 ubiquitin-protein ligase TRAIP isoform X2
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100474039 (TRAIP)
Enzymes [BR:
aml01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100474039 (TRAIP)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100474039 (TRAIP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
zf-C3HC4_3
zf-RING_11
DUF3450
Laminin_II
HIP1_clath_bdg
BRE1
WEMBL
zf-RING-like
GAS
Crescentin
Zn-ribbon_8
zf-RING_16
HMMR_N
RINGv
DUF745
FANCL_C
MscS_porin
Motif
Other DBs
NCBI-GeneID:
100474039
NCBI-ProteinID:
XP_002920580
Ensembl:
ENSAMEG00000012159
UniProt:
D2HET9
LinkDB
All DBs
Position
4:complement(18358385..18379948)
Genome browser
AA seq
469 aa
AA seq
DB search
MPIRALCTICSDFFDHSRDVAAIHCGHTFHLQCLIQWFETAPSRTCPQCRIQVGRRTIIN
KLFFDLAQEEESVLDAEFLKNELDNTRAQLSQKEKEKRDSQAIIDTLRDTLEERNATVES
LQKALDNAEMLCSTLKKQMKYLEQQQDESKQAQEEARRLRSKMKTMERIELLLQSQRPEV
EEMIRDMGVGQSAVEQLAVYCVSLKKEYENLKEARKASGELADRLKKDLFSSKSKLQTVY
TELDQTKLELKSAQKDLQSADKEIVSLKKKLTMLQETLNLPPVDSETVNRLVLESPAPVE
MLSLKLRRPAFGEDIDLNATFDVDTPPSQPSSIHHSRAKKFSQEIAHSPVQDIPKKMPKG
PKQESQLSLGGQRCVGEPDEELASAFPVFIRNAVLGQKQPKRAKAEPCRSTDAVRTGFDG
LGGRTKFIQPTDTTMIRPLPVKPKPKTKQRAGMRRALPASQAKLDTFLW
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcctatccgtgctctgtgcaccatctgctccgacttcttcgaccactcccgagatgtg
gccgccatccactgcggccacaccttccacctgcagtgcctaattcagtggtttgagaca
gcaccaagtcggacctgcccacagtgccgaatccaggttggcagaagaaccattatcaat
aagctcttctttgaccttgcccaagaggaggagagtgtcttagatgcagaattcttaaag
aatgaactggataataccagagcccagctttcccagaaagagaaggagaaaagggacagc
caggccatcattgacaccctgcgggacacactggaagagcgcaacgccaccgtggaatct
ctgcagaaggccttagacaatgccgaaatgctatgctccacgctcaagaagcagatgaag
tacttggagcagcagcaggacgagagcaaacaagcccaggaggaggcgcgccgactcagg
agcaagatgaaaaccatggaacggattgagctcctactccagagccagcggcccgaggtg
gaggagatgatccgagacatgggtgtgggacagtcagcggtggagcagctggctgtgtac
tgcgtgtccctcaagaaagagtatgagaatctaaaagaggcacggaaggcctcaggggag
ctggcggacagactgaagaaggacttgttttcttccaaaagcaagttgcagacagtctac
actgaactagaccagaccaagttggagctgaagtcggctcagaaggatttacagagtgct
gacaaggaaatcgtgagcctgaaaaaaaagctaacgatgctgcaggaaaccctgaacctg
ccaccagtggacagtgagacggtcaaccgcctggttttagagagcccagcccccgtggag
atgctgagcctgaagcttcgccgaccagccttcggtgaggacattgacctcaatgccacc
tttgatgtcgacacccctccgtcccagccctccagcatccatcacagccgtgccaagaag
ttctcccaagagatagcacactctcccgttcaggacatccccaagaagatgcccaaaggc
cccaagcaggagtcccagctctcactgggcggccagcgctgtgtaggagagccagatgag
gagctggctagtgcctttcctgtcttcatccggaatgctgtcctaggccagaaacagccc
aagagggccaaggcagaaccctgtcgcagcacagatgcagtaaggacaggcttcgatgga
cttggaggtcggacaaaattcatccaacctactgacacgactatgatccgcccactgcct
gtgaaacccaagcccaagactaagcagagagcggggatgaggagagcgctccctgcctcc
caggccaagctggacaccttcctgtggtag
DBGET
integrated database retrieval system
