Ailuropoda melanoleuca (giant panda): 100474063
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Entry
100474063 CDS
T01329
Symbol
TRAPPC8
Name
(RefSeq) trafficking protein particle complex subunit 8
KO
K20305
trafficking protein particle complex subunit 8
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100474063 (TRAPPC8)
Membrane trafficking [BR:
aml04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
100474063 (TRAPPC8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
SNAP
Motif
Other DBs
NCBI-GeneID:
100474063
NCBI-ProteinID:
XP_034498087
Ensembl:
ENSAMEG00000009932
LinkDB
All DBs
Position
14:complement(66516261..66584454)
Genome browser
AA seq
1307 aa
AA seq
DB search
MAQCVQSVQELIPDSFVPCVAALCSDEAERLTRLNHLSFAELLKPFSRLTSEGMWSPPFF
TVLPRSRAGRRKLGAGREEKGDVYILEPVEWRLGLGLRGVSAAAGGGAMSEVVKTARNEH
EMVAVLALLNNIWVILISYVLFILATTPWFESYRETFLQSMPASDHEFLNHYLACMLVAS
SSEAEPVEQFSKLSQEQHRIQHNSDCSYPKWFIPNTLKYYVLLHDVSAGDEQRAESVYEE
MKQKYGTQGCYLLKINSRTSNRASDEQIPDPWSQYLQKNSIQNQESYEDGPCTITSNKNS
DSNLLSLDGLDNEVKVDGLPNNFRAHPLQLDSSSDPSNSVDGPDHVKSASSLHETKKANT
GIIHGACLTLTDHDRIRQFIQEFTFRGLLPHIEKTIRQLNDQLISRKGLSRSLFSATKKW
FSGSKVPEKSINELKNTSGLLYPPEAPELQIRKMADLCFLVQHYDLAYSCYHTAKKDFLN
DQAMLYAAGALVGILDSDLRSALLLEQAAHCFINMKSPMVRKYAFHMILAGHRFSKAGQK
KHALRCYCQAMQVYKGKGWSLAEDHINFTIGRQSYTLRQLDNAVSAFRHILINESKQSAA
QQGAFLREYLYVYKNVSQLSPDGPLPQLPLPYINSSATRVFFGHDRRPADGEKQAATHVS
LDQEYDSESSQQWRELEEQVVAVVNRGVIPSNFHPTQYCLNSYSDNSRFPLAVVEEPITV
EVAFRNPLKVPLLLTDLSLLWKFQPKESSGKDNEEVKELVTGEPEMIGTEVISEFLINSE
ESKVARLKLFPHHIGELHILGVVYNLGTIQGCMTIDGIGALPGCHTGKHSLSMSVRGRQD
LEIQGPRLNNTKEEKTSIKYGPDRRLDPIITEEMPLLEVFFIHFPTGLLCGEIRKAYVEF
VNVSKCPLTGLKVVSKRPEFFTFGGNTAVLTPLSPSASENCSAYKTVVTDSTSVCTALIS
SASSVDFGIGTGSQPEVIPVPLPDTVLLPGASVQLPMWLRGPDEEGVHEINFLFYYESVK
KQPKIRHRILRHTAVICTSRSLNVRATVCRSNSLEDEEGRGGNMLVFVDVENTNTSEAGV
KEFHIVQVSSSSKHWKLQKSVNLSENKGSFVTFPLFIAYVVEDSKQLILEGQHHVILHTI
GKEAFSCPQKQEPPEMELLKFFRPENTTVPLRPSVEQLSNLIKTSLHYPESFNHPFHQKS
LCLVPVTLLLSNCSKADVDVIVDLRHKTTSPEALEIHGSFTWLGQTQYKLQLKSQEIHSL
QLKACFVHTGVYNLGTPRVFAKLSDQVMVFETSQQNSMPALIIINNA
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtgtgtacaatcagtgcaggagctaatcccggactccttcgtcccctgtgtc
gctgctctgtgcagcgacgaagccgagcggctcactcgactcaatcaccttagcttcgcg
gagttgcttaagcccttctctcgcctcacttcggagggtatgtggtctcctccctttttc
actgtgctccctcgaagccgggccgggagaaggaagttgggagcgggcagggaagagaag
ggcgatgtttacatcttggagccggtagagtggcgtctggggctggggctccgcggtgtc
tccgccgcggctgggggaggggccatgagtgaggttgtcaagactgcgcgcaatgaacat
gaaatggttgcagtgctagccctcctaaataatatatgggttattctcataagttatgta
ttgttcattttagctactactccatggtttgagtcttacagagagacctttcttcagtcg
atgccagcatcagatcatgaatttctgaaccactatttagcttgtatgttggtagcatca
tctagtgaagctgaacctgtggaacagttttcaaagttatcacaagaacaacatcgaatt
cagcacaacagtgactgttcctaccccaagtggtttataccaaatacacttaaatattat
gtacttttacatgatgtaagtgcaggagatgaacagagagctgaatcagtttatgaagaa
atgaaacagaaatatggaactcagggttgctatttacttaaaattaattctcgaacatct
aatcgggcatcagatgaacagataccagatccttggagtcagtatctccagaaaaatagt
attcaaaaccaggagtcatatgaagatgggccttgtactataacttcaaataagaattct
gatagtaacttgctttcattggatggattagataacgaagtcaaagttgatggcttacca
aataacttcagagctcacccacttcagttggactcatccagtgacccttctaacagcgtc
gatggcccagatcacgtaaaatctgcttcatcattacatgaaacaaagaaagcaaatact
ggaattattcatggtgcatgtttaactcttactgatcatgatagaattcgacagtttata
caagagttcacatttcggggccttttgccgcatatagagaaaacaattcggcaattaaat
gatcagttaatatcaagaaaaggtttaagtcgatctctattttctgcaactaaaaaatgg
tttagtggcagtaaagttccagaaaaaagcattaacgagctgaaaaatacatctggattg
ctatatccaccagaagcaccagagcttcaaatccgaaaaatggctgacttatgctttttg
gtgcagcattatgatttggcttatagttgctatcatactgcaaagaaagattttcttaac
gatcaagcaatgctttatgcagctggtgccttggttggtattctagattctgatcttcga
agcgcacttcttttggaacaggcggcacattgctttataaacatgaagagtcccatggtt
agaaaatacgcgtttcatatgatattggcaggccatcggtttagtaaagccgggcagaaa
aagcatgctttacgctgttattgtcaagccatgcaagtttacaagggaaaaggctggtct
cttgcagaggatcacattaatttcactattggacgccaatcgtatacccttaggcaactg
gacaatgctgtgtctgcttttaggcatattttaatcaatgaaagtaaacagtctgctgct
caacaaggggccttcctcagagagtatctttatgtttacaagaatgtaagtcagctgtca
ccagatggccctttaccacagctacctttaccatatattaacagttcagcaactcgggtt
ttctttggccacgacagacgaccagcagatggtgaaaagcaagcagctactcatgtaagt
cttgatcaagaatatgattctgaatcctctcagcagtggcgagaacttgaagaacaggtt
gtagctgtggttaacagaggagtaattccatccaatttccaccccacacaatactgtttg
aacagttattcagataactcaagatttccactggcagttgtagaagagccaataacagtc
gaagtggcctttagaaatcctttgaaggttccacttttgttgactgatttgtcattgcta
tggaagttccaaccaaaagagagtagtggaaaggataatgaagaagttaaagaactagta
acaggtgaacctgaaatgattggaactgaagttatttcagaatttttaattaatagtgaa
gaatctaaagtggcaagactaaagctctttccccatcacataggggagctgcatattctg
ggagttgtttataatcttggcactattcagggctgcatgacaatagatggcattggtgct
cttcctggatgtcacacaggaaaacattccttgagtatgtcagtccgagggagacaggat
ttagaaattcaaggtcctcgacttaacaatacaaaagaagagaaaacatctattaaatat
ggtcctgatcgacgtttagatcccattatcacggaggaaatgccactattggaggtgttc
tttatacattttcctacagggctcctctgtggagaaatccgaaaagcatacgtagaattt
gtcaatgtcagcaaatgtcctcttactggattgaaggttgtttctaaacgtccagagttc
tttacttttggtggtaacacagctgttctaacaccactgagtccctcagcttcggagaac
tgtagtgcttacaagactgttgtgacagattctacctctgtgtgtacagcactcatatca
tcagcttcctctgtagactttggcattggcacagggagtcagccagaggtgattcctgtt
ccccttcctgacaccgttcttctacctggagcttcagttcagctacccatgtggttacgt
gggccagatgaagaaggtgtccatgaaattaactttttgttttactatgaaagtgttaaa
aagcagcctaaaatacgtcacagaatattaagacacactgcagttatttgtaccagccga
tctttgaatgtccgagccactgtctgcagaagtaattctcttgaagatgaggagggccga
gggggcaatatgctcgtctttgtggatgtggaaaataccaatactagtgaagcaggtgtt
aaggaatttcatatagtacaagtatcaagtagtagcaaacactggaagttacagaaatct
gtaaatctctctgaaaacaaaggttcgtttgtgacttttcccctcttcatagcttatgta
gtggaagatagtaagcagcttattttggaaggtcagcatcatgttattcttcacactata
ggaaaagaagccttttcatgtcctcagaaacaggagccaccagaaatggaactattaaaa
tttttcaggccagaaaacactacagttcctttaagaccatcagtagagcagctttctaat
ctcattaaaacgagtcttcactatccagaatcatttaatcatccatttcatcaaaaaagc
ctttgtttagtaccagtcacccttttactgtccaattgttctaaggctgatgttgatgta
attgtcgatcttcggcataaaacaacaagtccagaagcattggaaatccatggatcattt
acatggcttggacaaacacaatacaaacttcagctgaaaagccaggagattcacagtttg
cagctgaaagcatgcttcgttcatacgggtgtttataaccttggaacgcctagggtattt
gccaagttatcggaccaagttatggtgtttgaaacaagtcagcagaactccatgcctgct
ctgatcattatcaataatgcgtga
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