Ailuropoda melanoleuca (giant panda): 100475083
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Entry
100475083 CDS
T01329
Name
(RefSeq) integrin alpha-X isoform X1
KO
K06462
integrin alpha X
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04610
Complement and coagulation cascades
aml04810
Regulation of actin cytoskeleton
aml05152
Tuberculosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100475083
09150 Organismal Systems
09151 Immune system
04610 Complement and coagulation cascades
100475083
09160 Human Diseases
09171 Infectious disease: bacterial
05152 Tuberculosis
100475083
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
aml04515
]
100475083
04090 CD molecules [BR:
aml04090
]
100475083
Cell adhesion molecules [BR:
aml04515
]
Integrins
Integrin alpha subunits
100475083
CD molecules [BR:
aml04090
]
Proteins
100475083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ITGAX-like_Ig_3
VWA
FG-GAP
VWA_2
Integrin_A_Ig_1
Integrin_A_Ig_2
FG-GAP_3
Integrin_alpha
VWA_CoxE
FG-GAP_2
Motif
Other DBs
NCBI-GeneID:
100475083
NCBI-ProteinID:
XP_002924795
LinkDB
All DBs
Position
10:complement(15592021..15642413)
Genome browser
AA seq
1166 aa
AA seq
DB search
MSDLPVMTGTRSPLLLLMGLASSLCFNLDTDQPKTFLMDSAGFGHSVVQYGNTWVVVGAP
QEIKAANQTGGLYQCDYSTGKCEPIRLQVPPEAVNMSLGLSLAASTNPSQLLACGPTLHH
TCRENVYLSGFCFLLGFPSWQAQRLPAALQECPRQEQDIVFLIDGSGSISPLDFTKMLNF
VKAVMSQFRRPNTQFSLMQFSDDFRVHFTFKDFTDSSNPLVLLDSVYQLGGYTHTATAIQ
MVTNQLFSTSSGARKDASKILIVITDGQKQGDYLNYEDVIPMAEAAGIIRYAVGVGLAFR
KRHSWKELNDIASKPSNEYIFKVDNFDVLRDIQNQLKEKIFAIEGTQTSSSSSFELEMSQ
EGFSAVFTPDGPVLGAVGSFGWSGGAFLYPPNKSPTFINMSQENVDMRDSYLGYSTELAF
WKGAQSLILGAPRHQHTGKAVIFTQTSGQWRPKAEVAGTQIGSYFGASLLAVDVDRDGSS
DLVLIGAPHYYKPSQGGQVSVCPFPQGRAKWQCAVILCGEQGHPWGRFGAALTVLGDVNG
DKLTDAAIGAPGEEESRGAVYLFHGTSRPGISPSHSQRISASQLSPRLQYFGQSLSGGQD
LTLDGLVDLAVGAQGQVLLLRTRPVLRVWMSVRFKPSEIARSLFECRKETSSVNTLGDAD
VCLHIDESPKNRLGNLQSSVTFDLTLDPGRQNPRAIFEETKTWNLTRVRDLGLRQHCETV
KLLLLACVEDTVTPITLRLNFSLVGKPIPSFGNLRPMLAVDAQRYYTASLPFEKNCGTDH
VCQDDLGISFGFSGLETLLVGSTLELNMKVMVWNDGEDSYGTTVTLFYPPGLSYRRVAEI
KNQLQPHSPRLTCDGVPAQGQSTQSTRCSINHLILQEGSQITFLVTFDVSPKAVLGDRLL
LTANVSSENNTPRTNKSTFQLELMVKYAIYTVISSHEQSTKYLNFSASDQKKSSQAQHRY
RVNNLGQRDLPISIIFSVPVELNGVPVWTDLEVFHPQNPSIQCSSERIVHTESDFLKHIQ
KNSLLNCSIADCLRYQCDFPSFGIQEELDFVLKGNLSFGWVSQTSQKKVLVVSVAEITFN
RSVYSQLPGQEAFLRAQIETVLEKYEVYNPLPIIVGSSVGGLLLLALITAILYKVGFFKR
QYKEMMAEASGQTVPEDGTSGPQVAQ
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccttccagtcatgactgggaccagatcacccctcctcctgttgatgggcttg
gcttcttctctctgcttcaacttggacacggaccagccaaaaaccttccttatggacagt
gctggatttggacacagtgtggtccagtatggcaacacctgggtggtggttggagccccc
caggagataaaggctgccaaccaaacaggcggcctctaccagtgtgactacagcacgggc
aagtgtgagcccatccgcctgcaggtccccccggaagctgtgaacatgtccctgggcctg
tccctggcagcctccacgaacccctctcagctgttggcctgtggccccacactgcaccat
acatgcagggagaacgtgtacttgtctgggttctgcttcctgctgggcttcccttcctgg
caagcccagaggctcccggctgccctgcaggagtgtccgaggcaagagcaggatatcgtg
ttcctgatcgacggctcaggcagcatctccccccttgattttaccaagatgttgaatttc
gtgaaggctgtgatgagccagttccggagacctaacacccagttctccctgatgcagttt
tccgacgatttccgggtgcacttcactttcaaagacttcaccgacagctccaacccgcta
gttctgctggattctgtgtatcagctgggaggatacactcacacagccacagccatccaa
atggtcacaaaccaactgttcagtacctcaagtggggcccgaaaagatgcctccaagatc
ctcattgtcatcaccgatgggcaaaaacaaggcgactacctgaattatgaggatgtcatc
cctatggctgaggctgcgggtatcatccgctatgcagttggggtgggattggcttttcga
aagagacattcctggaaagaattaaatgacattgcatcgaagccctccaatgagtacatt
tttaaagtggacaattttgatgttttgagagacatacaaaaccaactaaaagagaagatc
tttgccattgagggtacgcagacctcaagcagtagttcctttgaattggagatgtcccag
gagggcttcagcgctgtgttcacacctgatggaccagttctgggggctgtggggagcttc
ggctggtccggaggtgccttcctgtaccccccaaacaagagccccactttcatcaacatg
tctcaagagaatgtggacatgagggactcttacctgggttactccactgagctggccttt
tggaagggggcccagagcctgatcctgggggccccccgccatcagcatactgggaaggct
gtcatcttcacccagacgtccgggcaatggaggccgaaggctgaagtcgcagggacccag
attggctcctactttggggcctccctcctcgctgtggacgtggatagagatggcagctct
gaccttgtcctcatcggggctccccattactacaagccgagccaggggggccaggtgtct
gtgtgccccttcccccaggggagggctaagtggcagtgtgcggtcattctctgtggggag
cagggccacccctggggccgctttggggcagccctgacagtgctgggggatgtgaatggg
gacaagctgacagacgcggccattggagccccaggagaggaggagagccggggtgctgtc
tacctatttcatggaacctcaagaccgggcatcagtccctcccacagtcagaggatctca
gcctcccagctctcccccaggctccagtattttgggcagtcactgagtgggggtcaggac
cttaccctggatggactggtggaccttgctgtgggggcccagggacaggtgctgctgctc
aggaccagacctgtactcagggtgtggatgagtgtccgattcaaaccttcagagatagcc
aggtctctgtttgagtgtcggaaagagacctcctctgtcaacaccctgggtgatgccgat
gtctgccttcatattgatgaaagtcccaagaatcggctgggtaacctccaaagctctgtg
acctttgacctgaccctcgaccctggccgccagaatccccgtgccatctttgaggagaca
aagacctggaacctgactcgtgtccgagaccttgggctgcgacagcactgtgagactgtc
aagttgctgctcctggcctgtgtggaggacacagtgacccccatcaccttgcgtctcaac
ttctccctggtgggcaagcctatcccttcctttggaaacctccggcctatgttggctgtg
gatgctcagagatattacacagcctctctcccctttgagaagaattgtggaactgaccat
gtctgccaggatgaccttggcatctcctttggcttctcaggcttggagaccctgttggtg
gggagtaccctggagctgaatatgaaagtgatggtgtggaatgatggtgaggactcctat
ggaaccacagtcactctcttctacccgccagggctgtcttatcgacgcgtggcagagatc
aagaaccagctgcagccacactccccacgcctgacctgtgatggcgtcccagcccagggc
cagagcactcagagcacccgctgcagcatcaaccatctcatcctccaggagggtagccag
atcaccttcctggtcacctttgatgtctcccccaaggccgtgctgggagaccggctgctt
ctgacggctaacgtgagcagtgaaaataacactcccaggaccaacaagagcacctttcag
ctggagctcatggtgaaatatgccatctacaccgtaatcagcagccatgaacagtccacc
aagtacctcaacttctcagcctcagaccagaagaaaagcagccaggctcagcatagatac
cgggtgaacaacctgggacaaagggacctgccgatcagcatcatcttctctgtgcctgtg
gagctgaatggggtacctgtgtggacagacttagaggtcttccatccccagaacccctcc
attcagtgctcttcagagagaatagtacacacagagtctgacttcctaaagcacattcag
aagaattctctgctgaactgctccatcgctgactgtctgaggtaccagtgtgacttcccc
tcctttggcatccaggaggaactggacttcgtcctgaagggcaacctcagttttggttgg
gtcagccagacatcgcagaagaaggtattggtggtgagtgtggctgaaatcacattcaac
aggtccgtgtactcccagcttccaggacaggaggcattcttgagagctcagatagagacg
gtgctggagaaatatgaggtctacaaccccctccccattattgtgggaagctctgtggga
ggactgctgctgctggctctcatcacagccatcctatacaaggttggcttcttcaaacgt
cagtataaagaaatgatggcggaagcaagtggacagactgtcccagaagatgggacttca
ggccctcaagttgcccaataa
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