KEGG   Ailuropoda melanoleuca (giant panda): 100475450
Entry
100475450         CDS       T01329                                 
Symbol
RXRG
Name
(RefSeq) retinoic acid receptor RXR-gamma isoform X1
  KO
K08526  retinoid X receptor gamma
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml03320  PPAR signaling pathway
aml04659  Th17 cell differentiation
aml04919  Thyroid hormone signaling pathway
aml04920  Adipocytokine signaling pathway
aml04928  Parathyroid hormone synthesis, secretion and action
aml05200  Pathways in cancer
aml05202  Transcriptional misregulation in cancer
aml05207  Chemical carcinogenesis - receptor activation
aml05216  Thyroid cancer
aml05222  Small cell lung cancer
aml05223  Non-small cell lung cancer
aml05226  Gastric cancer
aml05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    100475450 (RXRG)
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    100475450 (RXRG)
   03320 PPAR signaling pathway
    100475450 (RXRG)
   04919 Thyroid hormone signaling pathway
    100475450 (RXRG)
   04928 Parathyroid hormone synthesis, secretion and action
    100475450 (RXRG)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    100475450 (RXRG)
   05202 Transcriptional misregulation in cancer
    100475450 (RXRG)
   05207 Chemical carcinogenesis - receptor activation
    100475450 (RXRG)
  09162 Cancer: specific types
   05226 Gastric cancer
    100475450 (RXRG)
   05216 Thyroid cancer
    100475450 (RXRG)
   05222 Small cell lung cancer
    100475450 (RXRG)
   05223 Non-small cell lung cancer
    100475450 (RXRG)
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    100475450 (RXRG)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:aml03000]
    100475450 (RXRG)
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:aml03310]
    100475450 (RXRG)
Transcription factors [BR:aml03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    100475450 (RXRG)
Nuclear receptors [BR:aml03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   100475450 (RXRG)
SSDB
Motif
Pfam: Nuc_recep-AF1 Hormone_recep zf-C4
Other DBs
NCBI-GeneID: 100475450
NCBI-ProteinID: XP_002914218
Ensembl: ENSAMEG00000006616
LinkDB
Position
8:120315261..120358892
AA seq 463 aa
MYGNYSHFMKFPTGFGGSPGHSGSTSMSPSAALSTGKPMDSHPSYTDTPVSAPRTLSAVG
PPLNALGSPYRVITSAMGPPSGALAAPPGLNLVAPPSSQLNVVNSVSISEDIKPLPGLPG
IGNMNYPSTSPGLLVKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLMYTCRDNKD
CLIDKRQRNRCQYCRYQKCLVMGMKREAVQEERQRSRERAESEAECASSGHEDMPVERIL
EAELAVEPKTESYGDMNMENSTNDPVTNICHAADKQLFTLVEWAKRIPHFSDLTLEDQVI
LLRAGWNELLIASFSHRSVSVQDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKD
MQMDKSELGCLRAIVLFNPDAKGLSNPSEVETLREKVYATLEAYTKQKYPEQPGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLETPLQIT
NT seq 1392 nt   +upstreamnt  +downstreamnt
atgtatgggaattattctcacttcatgaagtttcccacaggctttggcggctcccccggc
cactccggctccacgtccatgagcccatcggcagccttgtccacagggaagccaatggac
agccaccccagctacacggacaccccagtgagtgccccccggaccctgagtgcggtgggg
ccccccctcaatgccttgggttctccataccgagtcatcacatctgccatgggcccgccc
tcgggagcgctggctgcgcctccaggactcaatctggtcgccccgcccagctcccagcta
aatgtggtcaacagtgtcagcatttcagaggacatcaagcccttaccagggcttcctggg
attggaaacatgaactatccatcaaccagccccggtttgctggtgaaacacatctgtgcc
atctgtggggacagatcctcaggaaagcactacggtgtatacagttgtgaaggctgcaaa
gggttcttcaagagaaccataaggaaagacctcatgtacacgtgtcgcgataataaggac
tgcctcattgacaagcgccagaggaaccgctgtcagtactgccgttaccagaagtgcctg
gtgatgggcatgaagagggaagctgtgcaggaagaaaggcagaggagccgggagcgggcc
gagagcgaggcagaatgcgccagtagcggccatgaagatatgcctgtggagcggattcta
gaagctgaacttgctgttgaaccaaagacagaatcctatggtgatatgaacatggagaac
tcgacgaatgaccctgtcaccaacatatgccatgctgctgacaagcagcttttcactctt
gttgaatgggccaagcgcatcccccacttctctgacctcaccttggaggaccaggtcatt
ctgctccgggcagggtggaatgagctgctgattgcctctttctcccaccgctccgtctcc
gtgcaggatggcattctcctggccacgggcttacacgtccaccggagcagcgcccacagc
gccggggtcggctccatcttcgacagggtcctgactgagctggtctccaaaatgaaagac
atgcagatggacaagtcggagctggggtgcctgcgagccatcgtgctgtttaacccagat
gccaaggggctgtccaacccctcggaggtagagactctgcgagagaaggtttatgctacc
cttgaggcctacacaaagcagaagtatccggaacaacctggcaggttcgccaagctgctg
ctgcgcctcccagccctgcgctccatcggcttgaagtgcctggagcacctgttcttcttc
aagctcattggggacacgcccatcgacaccttcctcatggagatgctggagaccccgctg
cagatcacctga

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