Ailuropoda melanoleuca (giant panda): 100476900
Help
Entry
100476900 CDS
T01329
Symbol
SSH1
Name
(RefSeq) protein phosphatase Slingshot homolog 1 isoform X1
KO
K05766
protein phosphatase slingshot [EC:
3.1.3.16
3.1.3.48
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04360
Axon guidance
aml04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100476900 (SSH1)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
100476900 (SSH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aml01009
]
100476900 (SSH1)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
100476900 (SSH1)
3.1.3.48 protein-tyrosine-phosphatase
100476900 (SSH1)
Protein phosphatases and associated proteins [BR:
aml01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Slingshots
100476900 (SSH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSPc
DEK_C
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
100476900
NCBI-ProteinID:
XP_034494602
Ensembl:
ENSAMEG00000016450
LinkDB
All DBs
Position
12:complement(16960678..17015647)
Genome browser
AA seq
1085 aa
AA seq
DB search
MNVVYFPDFCVSEFQPAHGFRSSEVSSLNYLSESFFMVKGAALFLQQGNSPQSQRSLQHP
HKHAGDLPQHLQVMINLLRCEDRIRLAVRLESAWAERVRYMVVVDSSGRQDTEESILLGV
DFSSKERFSFRAPPPSASASSGDRSGYPGFHLAFLFVWEARALKSCTIGMVLRLWSDTKI
HLDGDGGFSVSTAGRMHVFKPVSVQAMWSALQVLHKACEVARRHNYFPGGVALVWATYYD
SCISSDQSCINEWNAMQDLESTRPDSPALFVDKPTEGERTERLIKAKLRSIMMSQDLENV
TSKEIRNELETQMNCNLKEFKEFIDNEMLLILGQMDKPSLIFDHLYLGSEWNASNLEELQ
GSGVDYILNVTREIDNFFPGLFAYHNIRVYDEETTDLLAHWNEAYHFINKAKRNHSKCLV
HCKMGVSRSASTVIAYAMKEFGWPLEKAYNYVKQKRSITRPNAGFMRQLSEYEGILDASK
QRHNKLWRQQSKTCLQQPVDDPAGSGDFLPETLDGTPEARLPCLDDAAQPGFPDSGAPGG
PTLPCCFRRLSDPLLHSPNDETGSVVHLEDLERDAVLEEVAELTEAHMPARHPQEASGLC
EKEVKKKLEFGSPKVQSGSSPQVEEMEGEEALGAGRWGRPLPRLDKGGLNRENLNNNNSK
RSCPDDFEHDAIFGILNKVKPSYKSCADCVYPLAGGAPEAFRERGENPGAPAICTQPTFL
PHLTSCPVAHTSSRSRALEKLASGPSESPPFLPPAGSRRSDVGGSGAAAAPELPASLLEP
SRETQKVLPKSLLLKNSHCDKNPLSMEVAKEELPPKKDLKPAKDLRLLFSKEAEKPATSS
YLMQHQESIIQLQKAGLVRKHTKELERLKGTPTDPASPCRDGTTSRLEASIPEENPDLAP
IPLPWPPALPSLAGSDEKSEAIPPPFEGTPLKSPTPFLGRMDHTSHFSKDFLKTICYTPT
SSSMSSNLTRSSSSDSIHSVRGKPGLVKQRTQEIETRLRLAGLTVSSPLKRSHSLAKLGS
LNFSTEDLSGEADTSTLTDSQDAKSSESAFLREPQATPRNPAATSQPSGKSASEHLRSPS
WMSKS
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtggtttatttccctgacttctgcgtctccgagtttcagccagctcacggcttc
cgctcttctgaggtttccagcctgaattacttaagtgagagctttttcatggtgaaagga
gcggccctcttcttacagcagggaaacagccctcaaagccagcgaagtcttcagcatccc
cacaagcatgcaggtgacttgccccagcatcttcaagtgatgatcaaccttttgcgttgt
gaggatcggatcaggctggctgtgcgcttggagagcgcctgggcagagcgggtccggtac
atggtggtggtggacagcagtgggcgccaggacacggaggagagtatcttgctgggagtc
gacttttccagtaaggaaagattctctttcagagcccccccaccatctgcgtctgcgtcc
tcaggagaccggagcggctaccccggcttccatcttgcattcctctttgtctgggaggcg
agagcacttaaaagctgcaccatcgggatggttctccggctgtggagcgacacgaaaatc
caccttgatggagatggggggttcagcgtcagcacagcgggacggatgcacgtctttaag
cccgtatcggtccaggccatgtggtctgccctgcaggtccttcacaaggcctgcgaagtg
gcacgaagacacaactacttccccggtggcgtggcactcgtctgggccacctactatgac
agctgcatcagctcggatcagagctgcatcaacgagtggaacgccatgcaggacctggag
tccacgcgacccgactccccggccctgtttgtggacaagccaactgaaggggaaaggact
gagcgcctcatcaaagccaagctccggagcatcatgatgagccaggatctagaaaatgtg
acctcaaaagaaatccgtaatgaattagagactcagatgaactgtaacttgaaagaattc
aaggaattcatagacaacgagatgctccttatcttgggacagatggacaagccctccctt
atcttcgaccacctttatctcggctctgaatggaatgcatccaatctggaggaactgcag
ggctcaggtgttgactacattttaaatgtcaccagagaaatagataattttttccctggc
ttatttgcatatcataacatccgggtctatgatgaagagacaacagaccttcttgcccac
tggaatgaagcgtaccatttcataaacaaagccaagaggaaccattccaagtgcctggta
cattgcaaaatgggtgtcagtcggtctgcttctacggtcatagcctatgcgatgaaggaa
tttggctggcctctggaaaaagcgtacaactatgtgaagcagaaacgcagcattacacgg
cccaacgcgggcttcatgaggcagctgtctgagtatgaaggcatcttggacgcgagcaaa
caacggcacaacaagctgtggcgtcagcagagcaagacctgcctccagcagcctgtggat
gaccctgcagggtctggggacttcttgccggaaaccctggatggcacgccagaggcccgg
ctgccctgcttggacgatgctgcccagcccgggttcccagacagcggggccccaggggga
cccactctcccctgctgcttccgccggctctcagaccccctcctgcattcccccaatgac
gaaaccggcagtgtagtccacctggaggatctggagagggatgctgtgttggaggaagtg
gctgagctgaccgaggcacacatgccagccagacatccccaggaagcttccggcctctgc
gagaaggaagtgaagaagaaactggagttcgggagccccaaggtccagagcggctcctcg
ccacaggtggaggagatggaaggggaggaggctctgggagcagggcggtgggggcggcct
cttccccggcttgataaaggcgggctcaaccgggagaaccttaacaacaacaacagcaag
aggagctgtccggatgacttcgagcacgatgctatatttgggatccttaacaaggtgaag
ccttcctacaaatcctgtgctgactgtgtgtaccctctagccggcggggctcctgaggcc
ttcagggagcggggcgagaaccctggagctcccgccatctgtacccagccaaccttcctg
ccccacctcacatcttgccctgtggcccacacgtccagcaggtcccgagctttagagaaa
ctggcctctggcccaagcgaaagtcccccgttcctaccaccagcaggctcgagaaggtca
gacgtcggtggctccggggctgcagctgccccagaactaccagctagccttttggaacct
tccagagaaacccaaaaagtcctgccaaagtccctccttttgaagaattctcactgtgat
aagaaccctctgagcatggaagtagcgaaggaggaattgccacccaagaaagatctgaaa
ccggccaaggacctgcggcttctgttcagcaaagaagccgagaagccggcaaccagcagc
tacctgatgcagcaccaggaatccatcattcagctgcagaaggcgggcttggtccgaaag
cacaccaaagaactggagaggctgaagggcacgcccacagacccggcgtctccctgtagg
gatggcaccaccagcaggctggaggccagcatccccgaagagaaccctgatctggccccc
atccctctgccatggcccccggctctgcccagcctcgctgggagcgatgagaagtcagag
gccatcccccctccattcgaaggcaccccactcaagagccccactcccttcctcggccgc
atggatcacactagtcatttctcaaaagacttcctcaagaccatctgctacacccccacc
tcctcctccatgagctccaacctgacgcggagctccagcagtgacagcatccacagcgtc
cggggcaagcccgggctggtgaagcagcggacgcaggagattgagacccggctccggctg
gcaggcctcactgtctcgtccccgctgaaacgctcacactctctggccaagcttggaagt
ctcaacttctcaactgaggacctgtctggcgaggcggacacatctaccctcaccgactcc
caggatgccaagtcgagtgagtctgccttcttgcgtgagccccaggcaaccccaaggaac
ccagctgccacctctcaaccgtcagggaaatctgcttcagaacacttgagaagcccctcg
tggatgagcaaaagctga
DBGET
integrated database retrieval system
