Ailuropoda melanoleuca (giant panda): 100478424
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Entry
100478424 CDS
T01329
Symbol
HDAC2
Name
(RefSeq) histone deacetylase 2
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03082
ATP-dependent chromatin remodeling
aml03083
Polycomb repressive complex
aml04110
Cell cycle
aml04213
Longevity regulating pathway - multiple species
aml04330
Notch signaling pathway
aml04350
TGF-beta signaling pathway
aml04613
Neutrophil extracellular trap formation
aml04919
Thyroid hormone signaling pathway
aml05016
Huntington disease
aml05031
Amphetamine addiction
aml05034
Alcoholism
aml05165
Human papillomavirus infection
aml05169
Epstein-Barr virus infection
aml05200
Pathways in cancer
aml05202
Transcriptional misregulation in cancer
aml05203
Viral carcinogenesis
aml05206
MicroRNAs in cancer
aml05220
Chronic myeloid leukemia
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
100478424 (HDAC2)
03083 Polycomb repressive complex
100478424 (HDAC2)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
100478424 (HDAC2)
04350 TGF-beta signaling pathway
100478424 (HDAC2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100478424 (HDAC2)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
100478424 (HDAC2)
09152 Endocrine system
04919 Thyroid hormone signaling pathway
100478424 (HDAC2)
09149 Aging
04213 Longevity regulating pathway - multiple species
100478424 (HDAC2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100478424 (HDAC2)
05202 Transcriptional misregulation in cancer
100478424 (HDAC2)
05206 MicroRNAs in cancer
100478424 (HDAC2)
05203 Viral carcinogenesis
100478424 (HDAC2)
09162 Cancer: specific types
05220 Chronic myeloid leukemia
100478424 (HDAC2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
100478424 (HDAC2)
05165 Human papillomavirus infection
100478424 (HDAC2)
09164 Neurodegenerative disease
05016 Huntington disease
100478424 (HDAC2)
09165 Substance dependence
05031 Amphetamine addiction
100478424 (HDAC2)
05034 Alcoholism
100478424 (HDAC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aml03036
]
100478424 (HDAC2)
Enzymes [BR:
aml01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
100478424 (HDAC2)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
100478424 (HDAC2)
HDAC complexes
Sin3A-HDAC complex
100478424 (HDAC2)
BRAF-HDAC complex
100478424 (HDAC2)
REST complex
100478424 (HDAC2)
SHIP complex
100478424 (HDAC2)
MiDAC complex
100478424 (HDAC2)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
100478424 (HDAC2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
100478424 (HDAC2)
Chromatin remodeling factors
NuRD complex
100478424 (HDAC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
100478424
NCBI-ProteinID:
XP_002922834
Ensembl:
ENSAMEG00000013147
UniProt:
G1M3K7
LinkDB
All DBs
Position
10:complement(62989856..63016413)
Genome browser
AA seq
488 aa
AA seq
DB search
MAYSQGGGKKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKA
TAEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVA
GAVKLNRQQTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHH
GDGVEEAFYTTDRVMTVSFHKYGEYFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQ
IFKPIISKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLG
GGGYTIRNVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYM
EKIKQRLFENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEE
FSDSEDEGEGGRRNVADHKKGAKKARIEEDKKETEDKKADVKEEDKSKDSSGEKTDTKGA
KSEQLSNP
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagtcagggaggcggcaagaagaaagtctgctactactacgatggtgatatt
ggaaattactattatggacagggtcatcccatgaaacctcatagaatccgcatgacccat
aacttgctgctaaattatggcttatatagaaaaatggaaatatataggccccataaagcc
actgctgaagaaatgacaaaataccacagtgatgagtacatcaaatttctacgttcaata
agaccagataacatgtctgagtatagtaagcagatgcagagatttaatgttggagaagat
tgtccagtgtttgatggactctttgagttttgtcagctctcaactggtggctcggttgct
ggggctgtgaagttaaaccgacaacaaactgatatggctgttaactgggctggaggatta
catcacgctaagaaatcagaagcatcaggattctgttacgttaatgatattgtacttgct
atccttgaattactaaagtatcaccagagagtcttatatattgatattgatatccatcat
ggtgatggtgttgaagaagctttttatacaacagatcgtgtaatgactgtatcattccat
aaatatggggaatactttcctggaacaggagacttgagggatattggtgcaggaaaaggc
aaatactatgctgtcaattttccaatgagagatggtatagatgatgaatcctatgggcag
atatttaagcctattatctcaaaggtgatggaaatgtaccagcccagtgctgtggtgctc
cagtgtggtgcggactcactatctggtgacaggctcgggtgcttcaatctgacagtcaaa
ggtcatgctaaatgtgtagaagttgtgaaaactttcaatttaccattactgatgcttggg
gggggtggatacactattcgtaatgttgctcgatgttggacatacgagactgcagttgcc
cttgattgtgagattcccaatgaattgccatataatgattactttgagtattttggcccg
gacttcaaactgcatattagtccttcaaacatgacaaaccagaacactccagaatatatg
gaaaagataaaacagcgtttatttgaaaatttacgcatgttacctcatgcacctggcgtc
cagatgcaagctattccagaagatgctgttcatgaagacagcggagatgaagatggagaa
gatccggataagagaatttctattcgagcctcagacaaacggatagcttgtgatgaagaa
ttctcagattctgaggatgaaggagaaggaggacgtagaaatgtggctgatcataagaaa
ggagcaaagaaagctagaattgaagaagacaagaaggaaacagaggacaaaaaagcagac
gttaaggaagaagataaatccaaggacagtagtggtgaaaaaacagataccaaaggagcc
aaatcagaacagctcagcaacccttga
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integrated database retrieval system