Ailuropoda melanoleuca (giant panda): 100483216 Help Entry 100483216         CDS       T01329                                  Symbol TRAF6 Name (RefSeq) TNF receptor-associated factor 6   KO K03175   TNF receptor-associated factor 6 [EC:2.3.2.27] Organism aml  Ailuropoda melanoleuca (giant panda) Pathway aml04010   MAPK signaling pathway aml04064   NF-kappa B signaling pathway aml04120   Ubiquitin mediated proteolysis aml04140   Autophagy - animal aml04144   Endocytosis aml04380   Osteoclast differentiation aml04620   Toll-like receptor signaling pathway aml04621   NOD-like receptor signaling pathway aml04622   RIG-I-like receptor signaling pathway aml04657   IL-17 signaling pathway aml04722   Neurotrophin signaling pathway aml04936   Alcoholic liver disease aml05132   Salmonella infection aml05133   Pertussis aml05135   Yersinia infection aml05140   Leishmaniasis aml05142   Chagas disease aml05145   Toxoplasmosis aml05152   Tuberculosis aml05160   Hepatitis C aml05161   Hepatitis B aml05162   Measles aml05168   Herpes simplex virus 1 infection aml05169   Epstein-Barr virus infection aml05170   Human immunodeficiency virus 1 infection aml05171   Coronavirus disease - COVID-19 aml05200   Pathways in cancer aml05222   Small cell lung cancer aml05235   PD-L1 expression and PD-1 checkpoint pathway in cancer aml05417   Lipid and atherosclerosis Brite KEGG Orthology (KO) [BR:aml00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     100483216 (TRAF6)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     100483216 (TRAF6)    04064 NF-kappa B signaling pathway     100483216 (TRAF6)  09140 Cellular Processes   09141 Transport and catabolism    04144 Endocytosis     100483216 (TRAF6)    04140 Autophagy - animal     100483216 (TRAF6)  09150 Organismal Systems   09151 Immune system    04620 Toll-like receptor signaling pathway     100483216 (TRAF6)    04621 NOD-like receptor signaling pathway     100483216 (TRAF6)    04622 RIG-I-like receptor signaling pathway     100483216 (TRAF6)    04657 IL-17 signaling pathway     100483216 (TRAF6)   09156 Nervous system    04722 Neurotrophin signaling pathway     100483216 (TRAF6)   09158 Development and regeneration    04380 Osteoclast differentiation     100483216 (TRAF6)  09160 Human Diseases   09161 Cancer: overview    05200 Pathways in cancer     100483216 (TRAF6)    05235 PD-L1 expression and PD-1 checkpoint pathway in cancer     100483216 (TRAF6)   09162 Cancer: specific types    05222 Small cell lung cancer     100483216 (TRAF6)   09172 Infectious disease: viral    05170 Human immunodeficiency virus 1 infection     100483216 (TRAF6)    05161 Hepatitis B     100483216 (TRAF6)    05160 Hepatitis C     100483216 (TRAF6)    05171 Coronavirus disease - COVID-19     100483216 (TRAF6)    05162 Measles     100483216 (TRAF6)    05168 Herpes simplex virus 1 infection     100483216 (TRAF6)    05169 Epstein-Barr virus infection     100483216 (TRAF6)   09171 Infectious disease: bacterial    05132 Salmonella infection     100483216 (TRAF6)    05135 Yersinia infection     100483216 (TRAF6)    05133 Pertussis     100483216 (TRAF6)    05152 Tuberculosis     100483216 (TRAF6)   09174 Infectious disease: parasitic    05145 Toxoplasmosis     100483216 (TRAF6)    05140 Leishmaniasis     100483216 (TRAF6)    05142 Chagas disease     100483216 (TRAF6)   09166 Cardiovascular disease    05417 Lipid and atherosclerosis     100483216 (TRAF6)   09167 Endocrine and metabolic disease    04936 Alcoholic liver disease     100483216 (TRAF6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aml04131]     100483216 (TRAF6)    04121 Ubiquitin system [BR:aml04121]     100483216 (TRAF6) Enzymes [BR:aml01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      100483216 (TRAF6) Membrane trafficking [BR:aml04131]  Endocytosis   Clathrin-mediated endocytosis    Ubiquitin E3 ligases     100483216 (TRAF6) Ubiquitin system [BR:aml04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     100483216 (TRAF6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH zf-TRAF TRAF6_Z2 zf-C3HC4_2 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-C3HC4_3 zf-C3HC4_4 zf-TRAF_2 zf-RING_5 TRAF3_RING SlyX U-box zf-RING_11 Spc29 DUF16 PspA_IM30 DUF4455 DUF3450 EzrA Myosin_tail_1 Laminin_II Med21 UPF0242 CENP-F_leu_zip ATG16 TMF_DNA_bd DUF1664 Motif Other DBs NCBI-GeneID:  100483216 NCBI-ProteinID:  XP_002926543 Ensembl:  ENSAMEG00000013844 LinkDB All DBs Position 16:complement(66560192..66581415) Genome browser AA seq 541 aa AA seqDB search MSLLNCENSCGSSQSESDCCAAMASSCSAAAKDDSVSGTASTGNLSSSFMEEIQGYDVEF DPPLESKYECPICLMALREAVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPD NFAKREILSLMVKCPNEGCLHKMELRHLEDHQAHCEFALMNCLQCQRPFQKCQLNIHIHK ECPRRQVSCMNCAALMAFEDKEVHDQNCPLANVICEYCNTMLIREQMPNHYDLDCPTAPI PCTFSTFGCHVKMQRNHLARHLQENTQSHMRMLAQAVQSLSLALAPVPQRDMPPYDSSSV SRVSTPCHPEVHNFQETIQQLEGRLVRQDHQIRELTAKMETQSMYVSELKRTIRTLEDKV AEIEAQQCNGIYIWKIGNFGMHLKSQEEEKPVVIHSPGFYTGKPGYKLCMRLHLQLPTAQ RCANYISLFVHTMQGEYDSHLPWPFQGTIRLAILDQSEAPVRQNHEEIMDAKPELLAFQR PTIPRNPKGFGYVTFMHLEALRQRTFIKDDTLLVRCEVSTRFDMGSLRREGFQPRSTDSG T NT seq 1626 nt NT seq  +upstreamnt  +downstreamnt atgagtctgctaaactgtgaaaacagctgtggatccagccagtctgaaagtgactgctgt gccgccatggccagctcctgtagcgctgcagctaaagatgacagtgtgagtggaaccgcc agcacggggaacctctccagctcttttatggaagagatccaggggtatgatgtggagttt gacccacctctagaaagcaagtatgaatgccccatctgcctgatggcattacgggaagca gtacaaacaccatgtggccacaggttctgcaaagcttgcatcatcaaatcaataagggat gctggtcacaaatgtccagttgacaatgaaatattgctggaaaatcaactatttcctgac aattttgcaaaacgagagattctttctctgatggtgaagtgtccaaatgaaggttgtttg cacaagatggaactgaggcatcttgaggatcaccaagcacattgtgaatttgctctcatg aattgtctccagtgccaacgtcccttccaaaaatgccaacttaatattcacattcataag gagtgcccgaggagacaagtttcttgcatgaactgtgctgcgttgatggcatttgaagat aaagaggtgcatgaccagaactgtcctttggcaaatgtcatctgtgaatactgcaatacc atgctcatcagagaacagatgcctaatcactatgatctagactgtccaacagccccaatt ccatgcacattcagtactttcggctgccatgtaaagatgcagcggaatcacttggcacgc cacctacaagagaatacgcagtcgcacatgagaatgttggctcaggctgttcagagttta agtcttgctttagctcctgtacctcagcgtgatatgccgccgtatgattcttcctccgtg tcccgggtctctactccgtgtcacccagaggtccataatttccaagaaaccattcagcag ttagagggtcgcctcgtaagacaagaccatcaaatccgagagctcactgctaaaatggaa actcagagcatgtacgtgagtgagctcaagcgaactatccgaacccttgaagacaaagtt gctgaaatagaagcgcagcagtgcaacggcatctacatctggaagatcggcaactttggg atgcatttgaaatctcaggaggaggagaaacctgttgtcattcacagccctggattctac acaggcaaacccgggtacaaactgtgcatgcgcctgcacctgcagttaccaactgctcag cgctgcgctaattatatatccctctttgtccacaccatgcaaggagagtatgacagccac ctcccttggcccttccagggtacaatacgccttgcaattcttgatcagtctgaggcacct gtaaggcaaaaccatgaagagatcatggatgccaaaccagagctgcttgccttccagaga cccacaatcccacggaacccaaaaggttttggctatgtgacttttatgcatctggaagcc ctaagacaaagaaccttcattaaggatgatactttactagtacgctgtgaggtctctacc cgcttcgacatgggcagtctccggagggagggttttcagccacgaagtactgattcgggg acatag

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