Ailuropoda melanoleuca (giant panda): 100483394
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Entry
100483394 CDS
T01329
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml02010
ABC transporters
aml04148
Efferocytosis
aml04975
Fat digestion and absorption
aml04979
Cholesterol metabolism
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
100483394 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
100483394 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
100483394 (ABCA1)
04979 Cholesterol metabolism
100483394 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100483394 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aml02000
]
100483394 (ABCA1)
Transporters [BR:
aml02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
100483394 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
DUF4162
AAA_23
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
100483394
NCBI-ProteinID:
XP_034521460
Ensembl:
ENSAMEG00000005131
LinkDB
All DBs
Position
7:complement(33744069..33885295)
Genome browser
AA seq
2179 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFSDARRLLLYSQKDT
SMKDIHQVLRTLQQIESSGSSLKLQDFLVDNETFSEFLTYNLSLPRLTVDKMLGASVSLH
KVFLQGYQLHLTNLCSGSKLEEVIQLGEQEVSKLCSLPREKLDSAEQVLHSNMDILKPIL
RELNSKSPFLSKELAKATKTLLDSLGTLAQELFSMNSWSDMRQEVMFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDAGSFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDVQGMWEELS
PKIWTFMESNPEMDLVRTMLDSRSNDHFWEQQLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLINKSMELLDERKFWAGVVFTG
ITPGSVELPRHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFGVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKIFVS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFSLTTSVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEESDEKSHPGSSQKGVSEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRFEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDVDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIILPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVRYVFAFCAPGEKRAHRKQNTADILQNLTGRNISDYLVKTYVQIIAKSLK
NKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKQVKKHLKLAKDSSADRFLSSLGRFMT
GLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQKGENPSQYGITAFNHPLNLTKQQ
LSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQERVSKAKHLQFISGVKPVIYWLSN
FVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKI
PSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNINDILKSVFLIFPHFCLGRGLIDM
VKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIRPRPVN
AKLPPLNDEDEDVKRERQRILDGGGQNDILEIKELTKIYRRKRKPAVDRICVGIPPGECF
GLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSDIHEVHQNMGYCPQFDAITELLT
GREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEKYAGNYSGGNKRKLSTAMALIGG
PPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLTSHSMEECEALCTRMAIMVNGRF
RCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFGLAFPGSVLKEKHRNMLQYQLPS
SLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNFAKDQSDDDHLKDLSLHKNQTVV
DVAVLTSFLQDEKVKESYV
NT seq
6540 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggcctcagctgaggttgttgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctattgctggaagtggcctggcctctatttattttcctgatcctgatc
tccgttcggctgagctacccaccctatgaacagcatgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccgactcctggtgaggcccctggggttgttggaaactttaacaaatcc
attgtgtctcgcctgttttcagatgctcggcgccttctcttatatagccagaaagacacc
agcatgaaggacatacaccaagttctgaggacattacagcagatagagagttctggttca
agcttgaagcttcaggatttcctagtggacaatgaaaccttctctgaattcctgacctac
aacctttctctgccaaggcttactgtggacaaaatgctgggtgccagtgtcagtctccac
aaggtatttttgcaagggtaccagttacatttgaccaatctgtgcagtggatcaaaatta
gaagaggtgattcaacttggtgaacaagaagtttccaagctttgcagcttgccaagggag
aaattggattcagcagagcaagtgcttcattccaacatggacatcctgaaaccgatcctg
agggaactaaactctaagtctcccttcctgagcaaggaactggctaaagccacaaaaact
ttgctggatagtctcgggactttggctcaagagctgttcagcatgaacagctggagtgac
atgcggcaggaggtcatgttcctgaccaatgtgaacagctccagctcgtccacccagata
taccaagccgtgtcgcgcatcgtctgtggccatcccgagggcgggggcctgaagatcaag
tccctcaactggtacgaggacaacaactacaaagccctctttggcggcaatggcacagat
gaagatgccggcagcttttatgacaattctacaactccttattgcaatgatttgatgaag
aatttggagtccagtcctctttcccgcatcatatggaaagctctcaagcctctgcttgtt
gggaagatcctgtatactcctgacactccagccaccaggcaggtgatggccgaggtgaat
aagacctttcaagaactggctgtgtttcatgatgtgcaaggtatgtgggaagagctcagc
cccaagatctggaccttcatggagagtaacccggaaatggaccttgttcggacaatgttg
gacagcagaagcaatgaccacttttgggaacagcaattggatggcttagactggactgct
aaagatatcctggcatttctggccaagcaccccgaggatgtccagtctgctaatggctct
gtgtacacctggagagaggccttcaatgagactgaccaggcaatccagaccatctctcgc
ttcatggagtgtgtcaacttgaacaaactcgaaccggtagcaacagaagtccggctcatc
aacaagtccatggagttgctggacgagcggaagttctgggctggtgtcgtgttcactgga
atcactcccggcagtgttgagctaccccgtcatgtcaagtacaagatccgaatggacatt
gacaatgtggagaggacaaataaaatcaaggatgggtactgggacccgggtcctcgggct
gacccctttgaggatatgcggtacgtctggggaggctttgcctacttgcaagacgtggtg
gagcaggcgatcatcagggtgctgacaggcacggagaagaaaactggtgtctatgtgcag
cagatgccttacccctgttacgtcgacgacatcttcctgcgggtgatgagccggtcgatg
cccctgttcatgacgctggcctggatctactccgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaacggcatc
ctctggttcagctggttcatcagtagcctcattcctctgctcgtgagcgccggcctgctg
gtggtcatcctgaaattagggaacctgctgccgtacagcgaccccagtgtggtgtttgtc
tttctgtctgtgttcggcgtggtgaccatcctgcagtgcttcctgatcagcaccctcttc
tccagagccaacctggcggcagcctgtgggggcatcatctacttcattctgtacctgccc
tatgtgctgtgcgtggcatggcaagactacgtgggcttcacgctcaagatcttcgtgagc
ctgctgtctcctgtggctttcgggtttggctgtgagtactttgcccttttcgaggagcag
ggcattggggtgcagtgggacaacctgtttgagagccccgtggaggaggatggcttcagc
ctcaccacttcagtctccatgatgctgttcgacacctttctctatggagtgatgacgtgg
tacatcgaggctgtctttccaggccagtatggaatccccaggccctggtattttccttgc
accaaatcctactggtttggtgaggaaagtgatgagaagagccaccctggttccagccag
aagggagtatcagaaatctgcatggaggaggaacccacacacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggctgttgatggcctggcc
ttgaatttctatgagggccagatcacctccttcttgggccacaatggagctggaaagacc
accaccatgtcaatcctgactgggttgttccctcccacctcgggcactgcctacatcctg
gggaaagacattcgctttgagatgagcaccatccggcagaacctgggggtctgcccccag
cataacgtgctgtttgacatgctgactgtggaagaacacatctggttctatgcacgtctg
aaggggctctcggagaagcacgtgaaagcagagatggagcagatggccttggatgtgggt
ttgccacccagcaaactgaaaagcaaaacaagtcagctgtcaggtggaatgaagagaaag
ctgtctgtggctttggcctttgttgggggatccaaggttgtcattctggacgagcctact
gccggtgtggacccttactcccgcaggggaatatgggagctcctgctgaaatatcgacaa
ggccgcaccattattctgtccacgcaccacatggatgaagcggacatcctgggggacagg
attgccatcatttcccatgggaagctgtgctgtgtgggctcctccctgtttctgaagaac
cagctgggaacaggctactacctgaccctggtcaagaaggatgtggaatcctccctcagt
tcctgtagaaatagcagtagcactgtgtcatacctgaaaaaggaggacagtgtttctcag
agcagttctgatgctggcctgggcagcgaccatgaaagtgacacgctgaccatcgatgtc
tctgccatctccaacctcatcaggaagcatgtggctgaggcccggctagtggaagacatt
gggcatgaactgacatatgtgctgccctacgaagctgccaaagagggggcctttgtggaa
ctcttccatgagattgatgaccggctctcagacctgggcatctctagttatggcatctca
gagacgaccctggaagaaatatttctcaaagtggctgaagagagtggggtggatgctgag
acctcagatggcaccttgccggcaagacgaaacagacgggccttcggggacaagcagagc
tgtcttcgcccattcactgaagatgacgccattgatcctaatgattctgacgtagaccca
gaatccagagaaacagacctgctcagcgggatggatggcaaaggctcctaccaggtgaag
ggctggaagctcacacagcagcagtttgtggcccttctgtggaagaggctgctgattgcc
agacggagtcggaagggattctttgctcagatcatcctgccagctgtgtttgtttgcatt
gccctggtgttcagcttgatcgtgcccccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaacgaacagtacacgtttgtcaggtacgtgtttgctttctgtgcccca
ggagagaagagagctcacagaaaacagaacactgcagacatccttcagaacctgactgga
agaaacatttcagattatctggtgaagacctatgtgcagatcatagccaaaagtttaaag
aacaagatctgggtgaatgagtttaggtatggagggttttccctgggtgccagtaattct
cattcacttccttcaagtcaagaagttaataatgccatcaagcaagtgaagaagcacttg
aagctggccaaggacagttctgcagatcgatttctcagcagcttgggaaggttcatgaca
ggactggacacgaaaaataacgtcaaggtgtggttcaacaacaagggctggcatgccatt
agctctttcttgaatgtcatcaacaacgccattctccgggccaacctgcagaagggagag
aaccccagccagtatgggattactgccttcaatcaccccctgaatctcaccaagcagcag
ctctcggaagtggctctaatgaccacatcagtggatgtcctcgtgtccatctgtgtcatc
ttcgcgatgtccttcgtcccggccagctttgttgtgttcctgatccaagagcgggtcagc
aaagcaaagcacctgcagttcatcagtggagtgaagcctgtcatctactggctctccaat
ttcgtgtgggatatgtgcaactatgtggtccctgccacgctggtcattatcatcttcatc
tgcttccagcagaagtcctatgtgtcctctaccaacctgcctgtgctagccctgctactt
ctgctgtatgggtggtcgatcacaccgctcatgtacccagcctctttcgtgttcaagatc
cccagcacagcctacgtggtcctcaccagcgtgaacctcttcatcgggatcaatggcagt
gtggccacttttgtgctggagctctttaccaacaacaagctgaataacatcaatgatatc
ctgaaatctgtattcttgatcttcccccatttttgcctgggacgggggctcattgacatg
gtgaaaaaccaagcaatggctgatgccttggaaaggtttggggagaaccgttttgtttcg
ccactgtcttgggacttagtgggacgaaacctcttcgccatggccgtggaaggggtggtg
ttcttccttatcactgttctcatccagtacagattcttcatcaggcccagacctgtaaat
gcaaagcttcctcctctgaatgatgaggatgaagatgtgaagcgggaaagacagagaatt
cttgatggcggaggacagaatgacatcttggaaatcaaggagttgacgaagatatataga
agaaagaggaagcctgctgttgacaggatttgcgtgggcattcctcctggcgagtgcttt
gggcttctgggagttaatggggctgggaaatcatcaacattcaagatgttaactggagat
accactgttaccagaggagatgctttccttaacaaaaatagtatcttgtcagacatccat
gaagtccatcagaacatgggctattgccctcagtttgatgccatcacagagctgctgacc
ggaagagagcacgtggaattctttgccctcttgagaggagtcccagagaaagaagttggc
aaggttggtgagtgggcaattcggaaactgggcctcgtaaagtatggagaaaaatacgct
ggtaactatagcggaggcaacaagcgcaagctctcaacggccatggctctgattggcggg
ccccctgtagtgtttctggatgaacctaccacaggcatggaccccaaagcccggcgattc
ttgtggaattgtgccctaagtattgtcaaggaaggcagatcagtagtgcttacatctcat
agtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatgggaggttc
aggtgtcttggcagtgtccaacatctgaaaaatagatttggggatggttatacaatcgtg
gtacgaatagcagggtccaaccctgacctgaagcctgtgcaggagttctttggacttgcc
tttccaggcagtgtcctcaaggagaagcaccggaacatgctccagtaccagcttccatcc
tcactgtcctctctggccaggatattcagcatcctttcccagagcaagaagagactccac
atagaagactactctgtttctcagacaacacttgaccaagtatttgtaaacttcgccaag
gaccaaagtgatgatgaccacttaaaggacttgtcattacacaaaaaccagacagtagtc
gatgttgcagttctcacatcttttctccaggatgagaaagtgaaagaaagttatgtatga
DBGET
integrated database retrieval system
