Ailuropoda melanoleuca (giant panda): 109488415
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Entry
109488415 CDS
T01329
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aml03041
]
109488415 (RBFOX1)
Spliceosome [BR:
aml03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
109488415 (RBFOX1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
109488415
NCBI-ProteinID:
XP_034526277
Ensembl:
ENSAMEG00000008605
LinkDB
All DBs
Position
10:complement(32419505..34436514)
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AA seq
580 aa
AA seq
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MASPSGSPEDSGKLRGRDGRQRREEEDAPPEEKRLKLGLEGGSSAQEEGEDAPRLGREET
GTQTGGEGRGDLLSLPYDLVESQDYKCENPTLLSSARSTPEDSVLTSLAASKVEETAQRT
HASGTYSFLDRTQHSDIKADCNTCVEIEDRKVSRQQMNCEREQLRGNQEAAAAPDTMAQP
YASAQFAPPQNGIPAEYTAPHPHPAPEYTGQTTVPEHTLNLYPPAQTHSEQSAADTSAQT
VSGTATQTDDAAPTDGQPQTQPPENTENKSQPKRLHVSNIPFRFRDPDLRQMFGQFGKIL
DVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVEGRKIEVNNATARVMTNKKTVNP
YTNGWKLNPVVGAVYSPEFYAGTVLLCQANQEGSSMYSAPSSLVYTSAMPGFPYPAATAA
AAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQEPVYGNKLLQGGYAAYRYAQPTP
ATAAAYSDRNQFVFVAADEISCNTSTVTDEFMLPTPTTTHLLQPPPTALVPCPKVPAPAQ
TSEELSCTLPGLCCQAAENLTASPPLLQFMFKVIVAQERK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccagcccttctggcagccccgaagactcgggcaagctcagaggcagggatggccgg
cagaggcgggaggaggaggacgcccctccggaggagaagagattgaagctggggctggag
ggaggaagctcagcgcaggaggaaggagaagacgcgccacgtctgggcagggaagagacc
ggcacccagacaggtggcgaaggcagaggtgatttactgtccctgccatacgacctggtc
gagagtcaggactacaaatgtgagaaccccaccctcctctccagtgccaggagcactcca
gaagactcagttttgacaagcctggctgccagcaaagttgaggaaactgctcaaagaact
catgccagtggaacttacagcttcctggatcggactcagcattcagatatcaaagcagac
tgcaatacctgtgtggaaatagaggacagaaaggtttcaagacaacagatgaattgtgaa
agagagcaactaaggggtaatcaggaagcagcagctgccccggacacaatggctcagcct
tatgcttcggcccagtttgctccccctcagaacggcatccctgcggaatacacggcccct
catccccaccccgcgccagagtacacgggccagaccaccgtccccgagcacacgttgaac
ctgtaccctcccgcccagacgcactcggagcagagcgcagcggacaccagcgcgcagacc
gtgtcgggcaccgccacacagacagatgacgcggcaccaacggatggccagccccagaca
caacctcctgaaaacacagaaaacaagtcccagcccaagcggctgcacgtctccaacatc
cccttcaggttccgagatccggacctccgacaaatgtttggccaatttggtaaaatctta
gatgttgaaattatttttaatgagcgaggctcaaagggatttggtttcgtaactttcgaa
aatagtgccgatgcggacagggcgagggagaaattacacggcaccgtggtagagggccgt
aaaatcgaggtaaataatgccacagcacgtgtaatgacaaataaaaagactgtcaaccct
tatacaaatggctggaaattgaatccagttgtgggtgcagtctacagccccgaattctat
gcaggcacggtgctgttgtgccaggcaaaccaggagggatcttccatgtacagtgccccc
agttcacttgtatatacttccgcaatgcccggcttcccgtatccagcagccaccgccgcg
gccgcctaccgaggggcgcacctgcgaggccgcggccgcaccgtgtacaacaccttccgg
gccgcggcgcccccacccccgatcccggcctatggcggagtagtgtatcaagagcctgtg
tatggcaataaattgctgcagggtggttatgctgcataccgctacgcccagccaacccct
gccactgccgctgcctacagtgacagaaatcagttcgtcttcgttgcagcagatgaaatt
tcttgtaacacctctacagttacggacgagtttatgctgccgacccctaccaccacacac
ttgctccagcccccacctacagcgttggtgccatgccccaaggttccagccccagcacag
acttcagaggagctaagctgcacacttccaggcctctgctgtcaggcagctgagaatctg
actgcctctcctcccctattacaattcatgtttaaagtcatagtcgcccaggaaagaaaa
tag
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