Amycolatopsis methanolica: AMETH_1556
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Entry
AMETH_1556 CDS
T03230
Symbol
dnaN
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
amq
Amycolatopsis methanolica
Pathway
amq03030
DNA replication
amq03430
Mismatch repair
amq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMETH_1556 (dnaN)
03430 Mismatch repair
AMETH_1556 (dnaN)
03440 Homologous recombination
AMETH_1556 (dnaN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amq03032
]
AMETH_1556 (dnaN)
03400 DNA repair and recombination proteins [BR:
amq03400
]
AMETH_1556 (dnaN)
Enzymes [BR:
amq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMETH_1556 (dnaN)
DNA replication proteins [BR:
amq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMETH_1556 (dnaN)
DNA repair and recombination proteins [BR:
amq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMETH_1556 (dnaN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AIJ21648
UniProt:
A0A076MLJ9
LinkDB
All DBs
Position
1591786..1592865
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AA seq
359 aa
AA seq
DB search
MDLTVSTAVLAASTAEAVRLLPAPALGGVLLTAGADGLGVAAVAPDHALRLERPALVHTG
GEALVPLRPLAETVRALDAEELRVSVEETRLVVRAPGGRFALPLLDRGLHPGIAAPPQAA
GSVAGPTLRGALEAVASAASREAALPIFTGVRMWTEGGVLTLLATDRYRMALATLDWTGG
RLDALAPAAALSALARGLGAAPSVGLGADSDRLGLSWGPDSFATALLGVPFPDERARELV
RAQPSGAVELDAEALVAALRRASPYAGPRGTVTLAGWDGELRVISSDPHSGESEQVVKAS
VSGGRMSATYQARYLLDALRPFAGRTVRIEHQEGLRPTVFTAPPEGGAAMTCVVVPMRV
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggatctcaccgtctccaccgccgtcctggcagcctcgacggcggaggcggtgcggctg
ctccccgcgcccgcgctcggcggcgttctgctcacggcgggggcagacggtctcggggtc
gccgcggtggccccggaccacgcgctccggcttgaacgtccggcactggtccacaccggc
ggcgaggcgctcgtgccgctccgtccgctggccgagacggtgcgggcgctggacgccgag
gagctgcgggtgtcggtcgaggagaccaggctggtcgtgcgcgcgcccggcggccggttc
gcattgccgctgctggaccgcgggctgcaccccgggatcgcggccccaccgcaggccgcg
ggttcggtggcgggtcccaccctgcgcggggcgctggaggcggtggcgagcgcggcgtcg
cgggaggccgcgttgccgatcttcactggtgtgcgcatgtggaccgaaggcggcgtgctg
accctgctggccaccgaccgctaccggatggcgctggccaccctggactggaccggcggc
cggctggacgccttggcgcccgcggccgcgctgtccgctttggcgcgcgggctcggggcg
gcgccgtcggtcgggctcggcgccgattccgaccggctcggccttagctgggggccggac
tcgttcgccaccgcgctactgggggtgccgttcccggacgagcgggcgcgcgagctcgtc
cgggcccagccgtcaggcgcggtcgagctggacgccgaggccctcgtcgcggccctgcgc
cgggcctcgccctacgccgggccgcgcggcaccgtgaccctcgccggctgggacggcgag
ctgcgggtgatcagcagtgatccgcacagcggggaatcggagcaggtggtcaaggcgagc
gtctccggcggccggatgagcgccacctaccaggcgcgctacctgctcgacgcgctgcgg
ccgttcgccgggcggacggtacggatcgagcaccaggaggggctgcgcccgacggtgttc
accgccccgccggagggcggcgcggcgatgacctgcgtggtggtcccgatgcgggtgtga
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