Actinoplanes missouriensis: AMIS_7510
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Entry
AMIS_7510 CDS
T01795
Name
(GenBank) putative DEAD/DEAH box helicase
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
ams
Actinoplanes missouriensis
Pathway
ams03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ams00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMIS_7510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ams03400
]
AMIS_7510
Enzymes [BR:
ams01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMIS_7510
DNA repair and recombination proteins [BR:
ams03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
AMIS_7510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
TRCF
UvrB_inter
CarD_TRCF_RID
Helicase_C
ResIII
MFD_D3
AAA_22
RecG_dom3_C
Motif
Other DBs
NCBI-ProteinID:
BAL85971
UniProt:
I0GYY4
LinkDB
All DBs
Position
807738..811355
Genome browser
AA seq
1205 aa
AA seq
DB search
MQLAGLIPAALRDRGLARARDLARKGHVDSDSLDLTAPVSLRPFVVATVAGASENGGAQR
PVLAVTATSREADDLADALGCLIEADRVAVFPSWETLPHERLSPRSDTVGKRLAVLRRLA
HPGDSPLQVIVAPVRSLLQPQLKGLGDLEPVELVTGGGAELEEVARRLSDMAYARVDLVT
KRGEFAVRGGILDVFPPTDEHPSRVEFWGDDVEEIRTFAVADQRTIEAVPRLWAPPCREL
LLTPAVREKAAQLATQHPELAEILDKLAEGIPVEGMESLAPALLQGTDSMELLIDCMPAG
THVLLCDPERIRTRAHDLTRTSDEFLEASWAAAASGGQAPIDVGAVAFRSLGDVRAHAAT
LRQPWWTISPFGLADAAAEEALPWEDPSSAVEVSPDAGDAIALAAQPVPLYHGDTAKLAG
DLDGWAKAGWAIALVFEGKGTAQRATELLRDAGLGVTPVDAIAKPIEDGQLLVTCGGLNH
GFVDEASRLAVITGNDISGGRGASTKDMRKMPARRRNTIDPLELKTGDFVVHEQHGIGRY
IELVQRTVNGADREYLVIEYAASKRGQPGDRLYVPTDQLDQLSRYVGGESPSLHKMGGAD
WQKSKARAKKAVKEIAAQLIQLYAARQASKGHSFGPDTPWQQELEDAFPYTETPDQMAAI
VEVKHDMELQVPMDRLICGDVGYGKTEIAVRAAFKAVQDGKQVAVLVPTTLLAQQHFNTF
TERMSQFPVQIKQLSRFQTPKEAALTLEQAADGTADIVIGTHRLLAKSTRFKNLGLIIVD
EEQRFGVEHKEQLKALRASVDVLTMSATPIPRTLEMAITGIREMSTIATPPEERHPVLTY
VGAQDDKQVAASIHRELLRDGQVFYLHNRVESIDRAARKLRELVPEARVAVAHGQMSEEQ
LEKVMVGFWEKEFDVLVCTTIVESGIDIPNANTLIVERADLLGLAQLHQIRGRVGRGRER
AYAYFLYPREKPLTEHAHERLATIAQHTELGAGMYVAMKDLEIRGAGNLLGGEQSGHIEG
VGFDLYVRMVGEAVSAFKGERPEEEPEVKIDLPVDAHLPTDYIAVERLRLEMYRKLAEAR
DETRLTEVVAEMTDRYGEPPAAVANLIAVARFRLVARAYGLTDVSMQGKHIRFSPLPLPD
SKQMRLKRYHPDSVYKPAADQVSVPRPSTRRVGGEPLRDQALLEWCAQLLKDVLGDVPAP
AVATR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcgccggtctcattcctgccgccctgcgtgaccgcggcctggcccgcgcccgc
gacctggcccgcaagggtcacgtcgactcggactcgctggacctcaccgcgcccgtgtca
ctgcgcccgttcgtggtcgcgacggtggccggcgccagcgagaacggcggcgcccagcgc
ccggtcctcgccgtcaccgcgacctcccgcgaggccgacgacctggccgacgccctcggt
tgcctgatcgaggccgaccgggtcgcggtcttcccgtcctgggagacgctgccgcatgag
cggctctccccgcgctccgacacggtcggcaagcggctcgccgtgctgcgccggctcgcg
caccccggcgacagcccgctccaggtgatcgtcgccccggtccgctcactcctgcagccg
cagctcaagggcctcggcgatctggagccggtggagctcgtcacgggcggcggggcggag
ctggaggaggtggcccggcgactgtccgacatggcgtacgcgcgggtggacctggtgacc
aagcgcggcgagttcgcggtccgcggcggcatcctggacgtcttcccgcccaccgacgag
cacccgtcccgggtcgagttctggggcgacgacgtggaggagatccgcacctttgcggtc
gccgaccagcgcaccatcgaggcggtgccgcggctctgggcgccgccctgccgcgagctg
ctgctcaccccggcggtgcgggagaaggccgcgcagctcgcgacgcagcatccggagctc
gccgagatcctggacaagctggccgagggcatcccggtcgagggcatggagtcgctggcg
ccggccctgcttcagggcaccgacagcatggagctgctgatcgactgcatgccggccggg
acccacgtgctgctctgtgaccccgagcggatccgcaccagggcgcatgatctcacccgt
acctccgatgagttcctcgaagcgtcgtgggccgccgccgcctccggcgggcaggcaccc
atcgatgtcggcgccgtcgctttccggagtctcggcgatgtccgggcacacgccgccacc
ctgcggcaaccgtggtggacgatctccccgttcggcctggccgacgcggccgccgaggag
gcgctgccctgggaggatccgtcgtcggcggtggaggtctcgccggacgccggggacgcg
atcgcgctcgccgcgcagccggtgccgctgtaccacggcgacacggcgaaactcgccggc
gacctggacggctgggccaaagcgggctgggcgatcgcgctggtcttcgagggcaagggg
accgctcagcgggccaccgagctgctccgcgacgccggtctcggcgtcaccccggtggac
gcgatcgcgaaaccgatcgaggacggccagctgctggtcacctgcggcgggctcaaccac
gggttcgtcgacgaggcgtcccggctcgcggtgatcaccggaaacgacatctccggcggc
cgtggcgcgtccacgaaggacatgcgcaagatgccggcccggcggcgcaacacgatcgac
ccgctggagctcaagaccggcgacttcgtggtgcacgagcagcacggcatcggccgctac
atcgagctggtccagcgcacggtcaacggcgccgaccgggagtacctggtcatcgagtac
gccgcgtccaagcgcggacagcccggcgaccggctctatgtgcccaccgaccagctcgac
cagctctcccgctacgtcggcggcgagtcgcccagcctgcacaagatgggcggcgccgac
tggcagaagagcaaggcccgggccaagaaggcggtcaaggagatcgccgcccagctgatc
cagctgtacgccgcccggcaggcctcgaaggggcactcgttcggcccggacaccccgtgg
cagcaggagctggaggacgcgttcccctacaccgagacgccggatcagatggccgcgatc
gtcgaggtcaagcacgacatggagctccaggtcccgatggaccggctgatctgcggcgac
gtcggttacggcaagaccgagatcgcggtgcgggccgcgttcaaggcggtgcaggacggc
aagcaggtcgcggtgctggtgcccaccacgctcctcgcccagcagcacttcaacacgttc
accgagcggatgagccagttcccggtgcagatcaagcagctgtccaggttccagacgccg
aaggaggcggcactcacgctggagcaggccgccgacggcaccgccgacatcgtgatcggc
acgcaccggctgctcgccaagtcgacccggttcaagaacctcggcctgatcatcgtggac
gaggagcagcggttcggtgtcgagcacaaggagcagctcaaggcgctgcgggcgtcggtg
gacgtgctgaccatgtcggcgaccccgatcccgcggaccctggagatggcgatcaccggc
atccgggagatgtcgacgatcgccaccccgccggaggaacggcacccggtgctgacctac
gtcggcgcgcaggacgacaagcaggtcgccgcctcgatccaccgcgagctgctccgcgac
gggcaggtcttctacctgcacaaccgggtcgagtcgatcgaccgcgccgcccgcaagctg
cgggagctggtgcccgaggcccgggtcgcggtggcgcacggtcagatgagcgaggagcag
ctcgagaaggtgatggtcggcttctgggagaaggagttcgacgtcctggtctgcaccacg
atcgtcgagtccggcatcgacatcccgaacgcgaacaccctgatcgtcgagcgcgccgac
ctgctcgggctggcccagctgcaccagatccgcggccgggtcggccggggacgcgagcgg
gcgtacgcgtacttcctctacccccgggagaagccgctcaccgagcacgcgcacgagcgg
ctcgccaccatcgcccagcacaccgagctcggcgccggcatgtacgtggcgatgaaggac
ctggagatccgcggcgccggcaacctgctcggcggtgagcagtccggccacatcgagggc
gtcggcttcgacctgtacgtgcggatggtcggcgaggcggtgagcgcgttcaagggcgag
cgccccgaggaggagcccgaggtcaagatcgacctgccggtcgacgcgcacctgcccacc
gactacatcgcggtcgagcggctgcgcctggagatgtaccgcaagctggccgaggcgcgc
gacgagacccggctgacggaggtcgtcgccgagatgaccgaccgctacggcgagccgccg
gccgcggtcgccaacctgatcgcggtggcccggttccggctggtggcccgggcctacggt
cttaccgacgtctcgatgcagggcaagcacatccgcttctcgccgttgccgctgcccgac
tcgaagcagatgcggctcaagcgctaccaccccgactcggtctacaagccggccgccgac
caggtcagcgtgccccggccgagcacccgccgggtgggcggcgagccgctgcgcgaccag
gcgctgctggagtggtgcgcacagctgctcaaggacgtcctcggcgacgtgccggcaccc
gccgtggcgacacgctga
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