Achromobacter mucicolens: PE062_18900
Help
Entry
PE062_18900 CDS
T08808
Symbol
tssI
Name
(GenBank) type VI secretion system tip protein TssI/VgrG
Organism
amui
Achromobacter mucicolens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_GPD
T6SS_Vgr
Phage_base_V
Sarcoglycan_1
DUF6484
Motif
Other DBs
NCBI-ProteinID:
WBX87489
LinkDB
All DBs
Position
4089114..4097711
Genome browser
AA seq
2865 aa
AA seq
DB search
MNALPSNAPAYSSLNIATLSQQARLLRLDTPLNAELVVEHLSLREGVSRLFSLTLDCLAA
SAEVDVSALLGKEISVSLLQADGAMRRWHAVVEGVDALGADGGLARFRLHAAPWMAALAL
RRDSFIYQDLSVQDIVSEVFSDYPQAAFAFELSQALEPLAVCTQYRESDLAFVERILAEA
GLSYRFEHQQDDGQSACGGARHRVVIFDADAARPQDPASPLRFHRSDATETSDSITRFAA
RQAVRPNRVARAAWNERTLNAHAAQSQSQVQVESLPVLEDYDYAGHGRYGDDDAAEQSAA
RALRAHESEVVRFEGAGTARSLAAGQVFALSQHARYAEGGGGQAADELGGNRYVVLDVTH
EATNNLGSQAAQVLNTPDMERGTYRNVFVAQPDAAALMPAWRARPTAPESLAAVVVSAAD
APITADRDLRVKVQFPWQRGEKPLPGGLPHRTHGDASGNAPGDDRSGTWLRVASAQAGPN
WGAHHLPRAGTEVIVEFIDGDINQPVVAGQLYNDADLPPWSAGEDGDANHAGVLSGWHSQ
GLDGAGRNQWLFDDTKGKLRTRLASSTAATQLGLGYLVEQDLDDASRGQWRGTGFELRSD
AWTVVRSGQGMLLSASAREQGKSTQADAQEALLLLRGAQDASRRLNDGAGQHKARPLAAS
EGYEDLLKALDPKLEGRYAAQVNGQAAGKAADGKRTGEAAVERINGPHLLIDSPNSLNLA
TPASAVLHAGEHLHATAQSDAHVAATQTYAAVSARSASVFAQQGAIRAVSAHAPVSLHAH
TDILEALAGQDITVTSSAEGIEILGQQRVTLQAAGGSVILDGADIVFKGPGLFSVKGATH
NFVGPGSDAAALPALPSTTVDDPLIVSAELIHKDGALASAAKKAGTSLMAGFGGAAGAAG
AGEGLGGLGDLAPSGLGELGKTAAGAAAKLSQFAGQANTLAGLAKNPMGALSQAPGLLGG
MGSTPSAVGGLLNTAKNTMGMVSQAQAMIANPMSALPAASGMLESVAPGAGGMIDGATAA
VGTVSKAAEWVKDPTAALPAATDMLASAAPEGASKMITSAASIAGLGKGAEVGSGAGLAA
DGGLTSAAATPSFAPTGTGAAQSAAAGSAPASASSPMTAASASPAADPAGAGASATAGTS
ATAGASATAGVSAGASGTAGASTQATASATTATPASAAPSTASGTPASASAQASSPASQT
VSQSASETALGSAATSESAATSAPQATGAAAPPSSAAPAATATAASPAGAMADNIAHPAN
GNLQAPSASDATTQTPTIATAAAGSSAASAIPSQAGTSAGVGASAGAGAGAGIASVAGAG
VASGATLAGTGIASNASLAGADTGVASGMLLADANPGIASGTSFTSADAGIPSGTSLANA
DAGIASATSLASADAGITPAVSLANTDAGITSAAFPANTDAGAPAAASLANTDAGVASAV
SSARADDLLASGAAAAGADANIASPASVAGADAGVASAIATSSSSTAVPSIVSAAGGAAA
FAAGATGVGVPATGALAASLSGRSSSASATMPIATQSGSGSESVSGSGSGSAFDSQASNA
GGPAFGSSSSDTSTSAAQADPAARSHLSSIAGTEAPGRIEADARTAPGSTHDAAPSASMA
APGQARQAEGSGAAIGLLAAVAGTVTATTSRRTHAQDGDDDTQHAHVGDDATRHAHDGED
ATHHAQVDPTRIGAAAAGLAPAFTQGSTTQHPGASPDAHPSTGPAPHHDHTAERDEQTTQ
AEQTARDARDWIARGTSAHREGGSDTASGVHASQRADAPLATGAAAARGSINAPAHDAAA
AAQQDDTTKGRSPAANAALLASIAAGAGSLLGATSAAASSVTQAASGSTAAPGSLPDALA
LPTGAPSVAAPSVPVASDAAISGLAVSSGATDPGATLAGAPSLPESAGVLTTPPLSGAAP
QMPGFVPASGESLPQGTGLPGTTGDDTFGLPNIEASPSPSVAVGAAGAGAAVDAAATSGA
ATSTLPAATGGIASAGPLAGTDSVAGSAGASPRLATADVSEGTAAGAGIETGSADAGAGA
IPGADATASSTNASAASAPIGANGAAAPVGSAAANGSAPATVTTQTTGAPSPADVSSTQP
AETTAPIASGGASPTPPLAAGNTTGATPPLASASTGADATSVTPPLASTGAGATGATPPL
ATAGAASATPPFAPAGTTAPAAPPDTVLGAETARAAGMADSTPATRATDLSAAGGAAGAA
AGGGGGAGASGIAAVAGGGTLAAVAQQASTASTVLSSASTLASGGVSANVGAAIVPVMTQ
ALNAAGDRAAALSSAVDTLFSLPDVKQANIPAVAGAILSMPGLSSSSVPGVIGAILQSPT
LATETLPKVAEVLMKIPGVADSPLPQIARDVLDTIGLGPVARTQGTNLPGGLPGPSGSGR
VVPSVSTYRGRQDGARLQYVNLERVDERWNDGNALTTTERQTRRPRIHVEFNRPGAHRFT
ITVKADAGNIAYSSRERGRRASYQEPHANPRSYVTDADGTRIVDDIDLPAAGRNVYLFEV
RDERGQLIKTERVETARRLYIQEVMCMSARPANHLADVTPVTAEFALHGIDMIQLPRLQF
RGRSAVDAADNVDAQQAIMDAVRRVYATSPGKQREPYTLVVCHVDRLAAPGTSGDMRLPV
PAGPGGRVMTVPIVNDDRTLASLWYEFDDSDDWLVHARYIYTDASGAERSIPIPRHLMTP
LRESSGAVFSVKVDLTQISSTPLNGVLNIQFNTVAASYAGLAITGTNLLFVSTLDPYEPN
SQAYLTETLAHEMGHLLGMVPSGPDWPGLRNEDSSADDSKLDPPQYFYYNMGGHCYFGLP
NRNGQYSDEIGQCVMYGITCANIHFCPSCSKAVRKVDCSEGWTSF
NT seq
8598 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccttgccttcgaacgccccggcctactcgtcattgaacatcgccacgctgtcg
cagcaggcgcgcctgctgcgcctggacaccccgctgaacgccgaactcgtggtcgaacac
ctgagcctgcgcgaaggcgtgtcgcgcctgttctcgctgacgctggattgcctggcggcc
agcgccgaagtggacgtgagcgcgttgctgggcaaggagatcagcgtcagcctgctgcag
gccgatggcgcaatgcggcggtggcatgcggtggtggaaggggtggacgcgctgggcgcc
gacggcgggctggcgcgtttccgcctgcatgccgcgccgtggatggccgcgctggcgttg
cggcgcgacagctttatctaccaggacctgtcggtgcaggacatcgtcagcgaggtgttt
tcggattatccccaggccgcgttcgcctttgaattgagccaggcgctggagccgcttgcc
gtgtgcacgcagtatcgagagtcggacctggcgttcgtcgaacgcatcctggccgaggcg
gggctgagctatcgcttcgaacaccaacaggacgacggccagtccgcctgcggcggcgcg
cgccaccgcgtggtgatcttcgacgccgacgccgcgcgtccgcaggacccggcctcgccc
ttgcgctttcaccgtagcgacgcgaccgaaacaagcgacagcatcacccggtttgccgcc
cggcaggccgtgcggcccaaccgcgtggcgcgcgccgcctggaacgagcgcacgctgaac
gcgcacgccgcgcagagccagtcgcaggtgcaggtggaatcgctgcccgtccttgaagac
tacgactacgccggccatggccgctatggcgatgacgacgcggccgagcagagcgccgcg
cgggcgctgcgcgcccatgaatccgaggtggtgcgatttgagggcgcgggcaccgcccgc
tcgctggcggcagggcaagtgttcgcgctgagccagcacgcacgctacgccgaaggcggc
ggcggacaggccgccgacgaactgggcggcaaccgttacgtggtgctggacgtgacgcac
gaagccacgaacaacctgggcagccaggccgcgcaggtgttgaacaccccggacatggag
cgcggcacgtatcgcaatgtcttcgttgcgcagcccgacgcggcagcgttgatgcccgcg
tggcgcgcgcgtcccacggcgccggaaagcctggctgccgtggtcgtcagcgcggccgat
gcgcccatcaccgccgaccgcgacctgcgcgtcaaggtgcagtttccgtggcagcgcggc
gaaaagccgctgccgggcggcctgccgcatcgcacgcatggcgatgccagcggcaatgcg
cccggcgatgaccgctcgggcacgtggctgcgcgtggccagcgcgcaggcgggcccgaac
tggggcgcgcatcaccttccgcgcgccggcaccgaggtcatcgttgaattcatcgacggc
gatatcaaccaacccgttgtcgcggggcagctctacaacgatgcggatctgccgccctgg
tccgccggggaagacggcgacgccaatcatgccggcgtgttgagcgggtggcacagccag
ggcctggatggcgcgggccgcaatcaatggctgttcgacgacaccaagggcaagctgcgc
acgcggctggccagttccaccgcggccacgcaacttgggctgggctatctggtggaacag
gacctggacgacgccagccggggccaatggcgcggcaccggctttgaactgcgctcggat
gcgtggacggtcgtgcgttccggtcagggcatgctgttgtcggccagcgcgcgggaacaa
ggcaagtcgacgcaagccgatgcacaggaagccttgctgctgctgcgcggcgcgcaggac
gcgtcgcgccggttgaacgacggcgcgggccagcacaaggcgcgccccctggcggcgtcc
gaaggctacgaggatctgctcaaggcgctggaccccaagctggaaggccgctacgccgcc
caggtgaacgggcaggccgcgggcaaggccgccgacgggaaacgcaccggcgaggccgcc
gtcgagcgcatcaacggcccgcatctgttgatcgattcgccgaactcgctgaacctggcc
acgccggccagcgccgtgttgcacgcgggcgaacacctgcacgccacggcgcaatccgat
gcgcatgtggccgccacgcaaacctatgcggcggtgtcggcacggtcggccagcgtgttc
gcgcagcaaggggcgatacgcgcggtttcggcacacgcgcccgtgtcgctgcacgcccac
accgacattctggaagccctggcagggcaagacatcaccgtcacgtcatcggccgaaggc
atcgagatcctgggccagcagcgcgtcaccttgcaggcagcgggcggcagcgtcattctc
gacggcgccgatattgtcttcaagggaccggggctgttttcggtcaagggcgccacgcac
aacttcgtcggccccggcagcgacgccgccgcgctgccggcgctgcccagcaccacggtc
gacgacccgctgatcgtcagcgcagagcttatccacaaggacggcgccctggcctcggcc
gccaaaaaggccggaaccagcctgatggccggtttcggcggcgcggcgggtgcggcgggt
gcgggcgagggcctgggcggattgggcgacctggcgcccagcggcttgggcgagctgggc
aagacggccgccggcgcggccgccaagctctcgcaatttgccggccaggcgaacaccttg
gccgggctggcgaaaaatcccatgggcgcgttgtcgcaggcgccgggcttgctcggcggc
atgggttcgacgccctccgccgtgggaggcttgctgaacacggccaagaacacgatgggc
atggtgtcgcaggcgcaagccatgatcgccaacccgatgtccgcgctgcccgccgcctcc
ggcatgctggagtccgtcgcgcccggcgcgggcggcatgatcgacggtgcgacagcagcc
gttggcacggtctccaaggccgctgaatgggtcaaagatcccaccgccgccctgcccgct
gcgaccgacatgctggcctcggccgcgcccgaaggcgcgtccaagatgatcacgagcgcc
gcgtcgatcgcgggactgggcaagggtgcagaggtaggttcgggcgcagggcttgccgcc
gacggcggactgacgagcgcggccgcgacgccgtccttcgcgccgacggggaccggtgct
gcgcaatcggcggctgcaggatcggcgccagcgtcggcatcaagcccgatgactgcggcg
agtgcgtcgccagccgccgaccccgcaggggcaggcgcatcggctacggcagggacatcg
gcaacggctggtgcgtcggctactgcaggggtctcggcaggtgcatcgggaacggcaggt
gcgtcgacgcaggccacggcttccgcgaccacggcaacaccggcgtccgcagccccatcc
accgcttcaggaactccggcgtccgcgtcggcacaggcctcgtcaccggcctcgcaaacg
gtctcgcaatcggcttcggaaacggcgttgggatcggcagcaacgtcggaatccgccgcg
acgtccgccccgcaggccacgggggccgcagcgcctccgtcttcggcggcccccgccgcc
acagcgaccgcggcatcgcccgcaggcgccatggctgacaacattgcacatccggccaac
ggcaacctgcaagcgccgtccgcatccgacgccacaacacaaacgcctacgattgccacg
gcagcggccggcagcagcgccgcgtctgcaattccttcccaagcaggcaccagcgccggc
gtgggagctagcgccggcgcgggcgcgggcgcgggcatcgcttcagtcgctggtgcgggt
gtcgcatcgggcgcaaccctggcaggcacaggcatcgcgtccaatgcgtcgctcgccggt
gcggacaccggcgtcgcctccggcatgctcctggcagatgcgaacccgggcattgcatcc
ggcacgtccttcacaagcgcggacgcaggtattccctccggcacgtcccttgcaaacgcg
gacgccggcattgcctccgccacttccctcgcaagcgcggacgccggtataacccctgcc
gtgtcccttgcaaacacagacgccggtattacctccgccgcgttccccgcaaacacagac
gccggggcacccgccgccgcgtccctcgcaaacacagacgccggtgttgcctccgccgtg
tcctccgcgcgcgcggacgaccttctggcatctggcgctgcggccgctggcgcggatgcg
aacatcgcctcgcccgcatctgttgctggcgcggacgccggcgttgcgtctgccatcgcc
acctcaagctccagcacggccgtcccgtccatcgtgtcggctgctggcggcgccgccgct
tttgccgctggcgcaacgggagtcggcgtcccggccacgggtgcgctggctgcctctttg
tcgggccgcagcagttcggcgtccgcaacgatgcccatcgcgacccaatcgggatcgggg
tcggagtcggtgtcgggatcgggatcgggatcggcgtttgactcgcaagcgtccaatgca
ggcgggcccgctttcggctcgtcctcatcagacacgtccacgtccgctgcgcaagccgac
cctgccgcccgctcgcatctgtcctccatcgcgggcacggaagcgcccggccgcatcgag
gcggacgccaggacggcgccgggctcgacccacgatgcagcgccgtccgcgtccatggcc
gcgccgggccaagcccgtcaggcagagggatcgggagccgccatcggcctgctcgccgcc
gtcgccggaaccgtgaccgcgacgacgtcgcgtcgtacgcacgcccaggacggcgatgac
gacacgcagcacgcgcatgtcggcgacgacgccacccggcacgcccatgacggcgaagac
gccacgcatcacgcgcaggtcgacccgacacgtatcggcgccgccgccgcgggactggcg
cccgcgttcacgcaaggatcgacaacgcagcatccgggcgcgtcgcctgacgcgcatccc
tcgaccggcccagccccgcatcacgatcacacggcggaacgggacgagcagaccacccaa
gcggaacagaccgctcgggacgcgcgcgactggattgcgcgcggcacgtccgcccaccgc
gaaggcggcagcgacacagcgtcgggcgtacacgcaagccagcgggccgatgcccccttg
gccaccggcgcggccgctgcgcgcgggtccataaacgcccccgctcatgacgcggctgcc
gccgcgcagcaggacgacacgaccaaggggcgcagcccggctgcgaatgccgcgctgctc
gcgtccattgcggcgggcgcgggcagtctgctcggcgccacctctgccgcggccagcagc
gtcacgcaagcggcgtccggctcgaccgccgcgccgggcagtctgcccgatgcattggcg
ttgccgactggcgcgccctccgttgccgcgccgagcgtgccggtcgcgtctgacgcggcg
ataagcgggttggcggtctcctccggcgccacggacccgggcgctaccctggcaggcgcg
ccgtcgctgcccgaatcggccggcgttttaaccacgccgcccttgtctggcgcggcgccg
caaatgcccggcttcgtgcctgcgtccggcgagagcctgccgcagggaaccgggctgccc
ggtacgaccggggacgatactttcgggcttccgaacatcgaagcctctcccagcccgtcc
gtcgccgtcggcgcggcgggcgcgggagcggcggttgacgcggccgcgacaagcggcgcc
gcgacctcgacccttcccgcagccacgggcggcatcgccagcgcgggtccgctcgcggga
acagactcggttgcaggttccgcgggggcttctccccgtttggcaactgccgacgtcagc
gaaggcacggcggcaggcgccggaatagagacaggctcagcggatgcaggcgcaggggca
atccccggcgccgacgcgaccgcaagttcaacgaacgcctcggcggcctccgctcccatt
ggcgcgaatggcgcggccgcgccggtcggttccgcagcggccaatggcagcgcaccggca
accgtcacaacgcaaactaccggcgcgccctccccggcggacgtctcttcgacccaaccc
gccgagaccaccgccccgatcgctagcggcggcgccagcccaacgcctccgctcgccgcc
ggcaacaccaccggcgcaacgccgcccctggccagcgcaagcaccggtgccgatgccacc
agcgtaacgccacccctcgccagcaccggcgccggtgccaccggcgcaacgcctcccctc
gcaacggccggcgctgcaagcgccacgccgccctttgcgccggccggaaccacagccccc
gccgccccgccggacaccgtgctcggcgccgagaccgcgcgcgcggcgggcatggccgac
agcacaccggcaacccgcgcgacggacctgtcggccgcaggcggtgcagccggcgctgcc
gcgggcggaggtggcggcgccggggcgtccggcattgccgccgtggctggcggaggcacc
ctggcggccgtcgcgcagcaggccagcaccgcctccaccgtgctatctagcgccagcacg
ctcgccagcggcggcgtcagcgccaacgtcggcgcggccatcgtgcccgtcatgacgcaa
gcgctgaacgcggcgggcgaccgcgccgccgcgctgagttcagccgtggacacgctgttc
tcgctgcccgacgtgaagcaggccaacattcccgccgtggccggcgccattctcagcatg
ccgggcctgtcgtcctcgtcggtgccgggcgtcattggcgccatcctgcaatcgcccacg
ctcgccaccgaaacgctgccgaaggtggccgaggtgttgatgaagatcccgggcgtggcg
gattcgccgctgccgcagatcgcgcgggacgtgctggacacgatcggactgggcccggtc
gcccgcacgcagggcaccaatctgcctggcggcctgcccggcccgtccggctccgggcgt
gtggtgcccagcgtctccacgtatcgcggccgccaggatggcgcgcgcctgcaatacgtc
aacctggaacgcgtggacgaacgctggaacgacggcaacgcgttgacgaccaccgagcgg
cagacccgccgcccgcggatccacgtggagttcaaccgtccgggcgcgcaccgcttcacc
atcaccgtcaaggccgacgccggcaacatcgcctactccagccgcgagcgcggccgccgc
gccagctatcaggagccgcacgccaatccgcgtagttacgtcacagacgccgacggcacc
cgcatcgtcgatgacatcgacctgcccgccgccggccgcaacgtctatctgttcgaggtg
cgcgacgaacgcggccagctcatcaagacggaacgcgtcgagaccgcgcgccgcctgtat
atccaggaagtgatgtgcatgagcgcccgcccggcgaaccatctggccgacgtgacgccg
gtcaccgcggaattcgcgctgcacggcatcgacatgatccagctgccgcgcctgcaattc
cgcggccgctcggcggtggatgcggcggacaacgtcgacgcgcagcaggcgatcatggac
gccgtgcgccgcgtgtacgccacctcgcccggcaagcagcgcgagccttacacgctggtg
gtgtgccacgtcgaccggctggccgcgcctggcaccagcggcgacatgcgcctgcccgtg
ccggccggcccgggcggacgcgtgatgacggtgcccatcgtcaacgacgaccgcaccctt
gccagcctatggtacgagttcgacgacagcgacgactggctcgtccacgcccggtacatc
tacaccgacgcgtcgggcgcggaacggtcgattcccattccgcgccatttgatgacgccg
ctgcgcgaaagctccggcgccgtcttctcggtgaaggtcgacctgacccagatttcatcc
acgcccctgaacggcgtgctgaacatccagttcaacacggtcgccgccagctatgctggc
ctggccatcaccggcaccaacctgctgttcgtgtccacgctggatccctacgagccaaac
tcgcaggcgtacctgacggaaacgctggcccacgaaatgggccacctgctcggcatggtg
cccagcggccccgattggcccggcctgcgcaacgaagactcctcggccgacgattccaag
ctggatccgccgcagtacttctactacaacatgggaggacactgctactttggcctgccc
aaccggaacggccagtacagcgacgagatcgggcagtgcgtgatgtacggcatcacctgc
gccaacatccacttctgcccgagttgcagcaaggccgtgcgcaaggtggactgctcggaa
ggttggacctcattctga
DBGET
integrated database retrieval system
