Akanthomyces muscarius: LMH87_003528
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Entry
LMH87_003528 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
amus
Akanthomyces muscarius
Pathway
amus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
LMH87_003528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amus03021
]
LMH87_003528
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_003528
Transcription machinery [BR:
amus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
LMH87_003528
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
LMH87_003528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
CFIA_Pcf11
VHS
UBZ_FAAP20
Hepar_II_III_N
Motif
Other DBs
NCBI-GeneID:
80890687
NCBI-ProteinID:
XP_056048323
LinkDB
All DBs
Position
2:1291414..1293624
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AA seq
652 aa
AA seq
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MSAESDEVAEDYRLALEDLSSNMRFEISNLTVIARENTEHALAIAEVLQQHILKAPPAKK
LPALYVLDSIVKNVGTPYTLYFGRNLFKIFMESYAMVDNAVRKRMEDMLKTWKDPVPGSM
DTRPVFSHELVRPIENALMRARAALMPQSAMGGRGRGVMMPHRNTPTPPGMRGYPVVDGQ
GQPQNGGPVPGQHQGQPPANYFRQVTPQSGQPQGPYPPPGQYGTGPPGTNVDKLNQDIQN
LIVATHAELSQSPHDAGIQIRLKALTDLQSVVQKSTLPPDQLELIKNKVTELAAVTRPSV
APSYAGQNLLPTRPSSGQFQQVTQPSAPPAGQHPQGQVSLDALLGQGALAALMSRTGSNS
NNTTPNPPGSGAIRSPPPVPAQLPTPAAAAPNNAVSLLDRLRQAGMLPPTATPTPPVAQA
AAPPPLIPANIASILSAAKAGAFGLPNIGAGSLNEAMLKQQSPDNIIHALYDELGSPCAE
CGRRFKRNMEGDKKRRAHMDWHFKVKQRSAEAEKRGTHRSWYVDQQDWLRSREVVDVDHI
AQPEPSAEEQSKTASVPKYIPVPEPTSGINNVCPICQEKFENKWLDTAQEWVWLDAVLVR
NRAYHASCYAEATRDREGTPGASRRTPEPVLGKRKAEGGLLSPKIRTLKTAY
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgaatcagatgaagtggcggaagactaccgtctcgcgctcgaggacctctcc
tccaacatgcggttcgagattagcaacttgactgtcatcgcgcgagagaacactgagcat
gccttggccattgccgaggtgctgcagcaacacattctcaaggccccccctgctaagaag
ctgcctgctctctatgtgcttgactccattgtaaagaatgttggcactccctacacactc
tattttggtcgaaacctgttcaagatatttatggaatcatacgccatggtcgataatgcc
gtgcgaaagaggatggaggacatgctcaagacgtggaaagaccctgtccccggatcaatg
gacaccaggccagttttctcccacgaattggttcggccgatagagaatgctctcatgcga
gcacgcgcggctttgatgccgcaaagtgcaatgggtgggcgaggacgaggagtcatgatg
ccacaccgcaacacccctacaccgccgggtatgcgcgggtatcctgtcgttgacggccaa
gggcagccgcagaatggaggaccagtacctggccagcaccagggtcagcctccggccaac
tatttccgtcaagtcacaccacagtctggccaaccacaaggaccttatccgccccctgga
caatatggcactggaccgccgggcacaaacgtagacaagttgaatcaggatatccagaat
ctgattgtagcgacacatgccgagctctcacagagtccgcatgacgcgggaattcagatc
agacttaaagcattgacggatctccaaagtgtcgtccaaaagtcgacactgcctccagac
cagcttgagctcattaaaaacaaagtaactgaacttgctgctgtaaccaggcccagcgtg
gccccttcatatgcagggcaaaacctgctacctacgcgcccatcctcggggcagtttcaa
caagtaacccaaccttcagccccccctgccggccaacatccgcagggacaggtatccctt
gacgctttgctgggtcagggagctctcgctgccttgatgtcgagaacaggatccaattcc
aacaacaccacacctaacccccctgggtcgggagcaatccgatcacctcctcctgtccca
gcccaacttccaacaccagccgctgcggccccaaacaatgcagtgtctctgctcgataga
ctgcggcaagcaggtatgctgccgccaaccgccactccaacaccaccggtcgcccaagct
gcggctccgccaccccttatcccggccaacattgccagtattctgtcggcagcaaaggct
ggcgcttttggattgcccaacataggagccggaagcctcaatgaagccatgttaaagcaa
caatcacctgacaacatcatccacgccctgtatgatgagctaggatcgccttgtgctgaa
tgtggcaggcgtttcaagcgaaatatggagggtgacaagaagagacgagctcatatggac
tggcatttcaaggtgaaacagcgcagtgccgaggcagagaagagaggcacgcaccgaagt
tggtacgttgaccaacaggattggcttaggtctcgagaagtcgtcgacgtagaccacatc
gcgcagccggagccttcggccgaagagcagtccaagactgcctcggttcctaaatatatt
ccggttccagaacccaccagcggcatcaacaatgtttgccctatctgtcaggagaagttt
gagaataagtggcttgacactgcacaggagtgggtatggttggacgcagtcttggtacgg
aaccgcgcctatcatgcctcgtgctatgccgaggctacacgggaccgagagggcacacct
ggcgcctcgagacgaaccccagagcctgtgctcgggaaaagaaaggcagaaggtggcctg
ctgtcgcccaagattcggacgcttaagacggcgtactag
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