Akanthomyces muscarius: LMH87_011056
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Entry
LMH87_011056 CDS
T09501
Name
(RefSeq) hypothetical protein
KO
K14328
regulator of nonsense transcripts 3
Organism
amus
Akanthomyces muscarius
Pathway
amus03013
Nucleocytoplasmic transport
amus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
amus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
LMH87_011056
03015 mRNA surveillance pathway
LMH87_011056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amus03019
]
LMH87_011056
Messenger RNA biogenesis [BR:
amus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
LMH87_011056
mRNA cycle factors
P-body specific factors
LMH87_011056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
80898215
NCBI-ProteinID:
XP_056052016
LinkDB
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Position
4:complement(1232727..1234909)
Genome browser
AA seq
631 aa
AA seq
DB search
MLNHPSVYKKGINIALTNGAAANAASQGNEPGKGKGGREGGSSRPKKRRGQGDKKIDNSK
GRETEAPRPPRQRQQNDGGKLILRRLPPGMTEAECVAILGETWAVGRGKVDWFSFIAGKI
STDPSKPSRPARAYIHLIKKDDMLALTLVGPPSLELSAYKKVPSNKKRTDTRQGTIDQDP
EFMAFLEGLANPAPLRDGADMDDGDDANKGESKVTTTPLVEYLKEKKANKSKDSSSSKKR
GEGKNKGSKEDEPSKKKGRESRAEKADKAEKGSKTTVKILTKKAATEQAADAAKNAAKAI
NAAIAQDAPKSKRAGIATAARILQRDLGLSPGSAHRRARQDAAKAEAKSKEETPIEQAQE
ASQSAETGNSQEGKAKTNGTAGKPQIGRRGRDARNGEKPASATEASSQPTAPKPPVILKK
RPEGQAITPSSPAAVPSASANQQIANTKGVAEKNPKLAATNSKAGQSQKKLQSVTADATK
AFVKHAVHSQGVTEAALRQALEPLGTIIAIEMDKRKAFAYVDFSDHAGLVKAVAASPLAV
AQGSVQILERKDKKPATGNPGTGVGTTAPSAAADKDKAKDGEKEKEKGETRRGRRGRGGK
GNNGGGASTTPASTASGAQAASGGPVPASSG
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctcaaccatccaagcgtgtacaaaaagggcatcaatattgcactgacaaacggggcg
gctgctaacgccgccagccaaggaaacgagcctggcaaaggcaaaggtggccgggaaggc
ggcagctcgaggcctaagaagcgccgtgggcaaggagataagaagatcgataattcaaag
gggcgagaaactgaggcacccagaccaccacgccagcggcaacagaatgatggaggaaag
ctcatcctccgtcgactcccgccaggaatgactgaagctgaatgtgtggccattctaggc
gagacatgggccgttggcagaggcaaagtcgattggttctccttcattgcgggcaagatc
tccaccgatccatccaagccatcacgtcctgcaagagcatacatccatctcatcaagaag
gatgacatgctagccttgacactcgtcgggccaccgtctttagagttgtcggcttacaaa
aaagtgcctagcaataagaagcgcaccgacacccggcaaggcactatagatcaagacccc
gaattcatggcatttctcgagggactcgcgaatccggcacctctccgcgacggtgctgac
atggacgatggggatgacgctaataagggcgaatccaaagtcacaacgacgccgttggtt
gagtacttgaaagagaaaaaggccaataaatcgaaggactcgagctctagcaagaagcgc
ggcgaagggaaaaacaagggctccaaggaggacgagccttctaagaagaagggtcgagaa
tcaagggccgaaaaagcagacaaggcagagaagggctcgaaaacgacggtcaaaatcctg
acaaagaaagctgcaaccgaacaagcagcagatgccgccaagaatgccgccaaagcaatc
aacgctgccattgcccaagacgcgccgaagagcaagcgtgccggaatcgctaccgctgct
cgcattctgcagcgggacttgggtctcagtccgggatctgcgcatcgccgagcgcgacag
gatgcagccaaggctgaggcgaaatccaaagaggaaaccccgatcgaacaggcgcaggaa
gctagtcaatcagcagaaactggtaacagtcaagagggtaaagccaaaaccaatggcaca
gcgggaaaaccccaaatcggaagacgaggccgcgatgccaggaacggagagaaacccgcc
tcagcgacagaagcctcatcacaacccacagcccccaagccacctgtaattctcaagaag
agaccagaaggacaagccattacgccgagcagcccagctgctgtcccgtcagcatcagcc
aaccaacagattgcgaacacaaaaggggtagcggagaagaatcctaaacttgccgcgact
aatagcaaggcaggtcaatctcaaaagaagctgcaatcagttaccgcggatgctacgaaa
gcatttgtgaagcatgctgttcactctcaaggggttactgaagcggcgctgaggcaagct
ctggagccgcttggaaccatcatcgccatagaaatggacaagcgcaaagcattcgcctat
gttgatttttctgaccatgctggacttgtcaaagctgtggctgccagtcctctggccgtc
gcacaggggtcggtacagattctagaacgcaaagacaagaagccggcaacaggaaaccct
ggcacaggagtgggtactacagctccatctgcggcggcagacaaggataaggcgaaagac
ggcgaaaaggagaaggagaaaggagagacaagacgcggtcgtcgcggtcgaggtggcaag
gggaacaacggaggaggagcctcgactacaccagcgtctactgcttctggtgcccaagcc
gcctccggtggccctgtaccagcatcttcaggatga
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