KEGG   Akanthomyces muscarius: LMH87_011097
Entry
LMH87_011097      CDS       T09501                                 
Name
(RefSeq) hypothetical protein
  KO
K03144  transcription initiation factor TFIIH subunit 4
Organism
amus  Akanthomyces muscarius
Pathway
amus03022  Basal transcription factors
amus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:amus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    LMH87_011097
  09124 Replication and repair
   03420 Nucleotide excision repair
    LMH87_011097
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amus03021]
    LMH87_011097
   03400 DNA repair and recombination proteins [BR:amus03400]
    LMH87_011097
Transcription machinery [BR:amus03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     LMH87_011097
DNA repair and recombination proteins [BR:amus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     LMH87_011097
SSDB
Motif
Pfam: Tfb2 Tfb2_C Helicase_C_3
Other DBs
NCBI-GeneID: 80898256
NCBI-ProteinID: XP_056052059
LinkDB
Position
4:1359725..1361396
AA seq 508 aa
MAANPQPALQLADYLEKLPGTTFRKLYQQPSTAFAIFRRMLPQLAKTFVMRMLYMPSPMS
LADLDTWVKPEAKRQKDQMLSTLRSLHIVQISAPSKDKTQHVQLTANFRASMRLALTGGG
NHNSFGVPSTLAVPPEIDMPFLDRYARRRWDDILHFVVSSVGYKSGGGGAGGGADGAGPN
KTVKDILVAGRLVDRRPNGSVGITQAGFTFLLQEANAQVWTLLLLWLDAMEADKSAAVDV
LSFLFVLASLDLGRAYDTNALTEQRRDMLPALADFGLVYIPPQKRSMFFPTRLATTLTSG
AGSSSLRSISDGVAAATSAALSSSSSANPNPSSSNSSGPLGSSGDQTGSVVIETNYRLYA
YTQSTLQIAVLALFSKLGMRFPDMVAGRITRTSIRQAIQFGITADQIIAYLAAHAHEQMH
RTAALTSKPVLPPTVVDQIRLWQLENERMKTTGGFLFRDFDDTKEYQDTRRFADEIGVLV
WSNDKTGMFFASKFEQIRDYLKSRKKAE
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggccgccaatccgcagccggcgctgcagctggccgactacctggagaagctgccgggg
accacgtttcggaagctctaccagcagccttcgacagcctttgccattttccggcgcatg
ctgccgcaactcgccaaaacattcgtgatgcgcatgttatacatgcccagcccgatgagc
ctggctgacctggacacatgggtaaagcccgaagcgaaaagacaaaaagaccagatgctc
tcgacgctccgatcccttcacattgtgcagatatccgccccttccaaggacaagacgcag
cacgtccagctcacggccaactttcgcgcctcgatgcgcctcgccctcaccggcggcggc
aaccacaactcctttggcgtgccctcgaccctcgccgtcccgcccgagattgacatgccc
tttctcgaccgctacgcgcgccgccgctgggacgacatcctgcactttgtcgtctcctct
gtcggctacaagtcgggcggcggcggagcaggcggcggcgcagacggcgcgggccccaac
aagacggtcaaggacatactcgtcgcgggccgcctcgtcgaccgccgccccaacggcagc
gtcggcatcacacaggccggcttcacctttctcctgcaagaggccaacgcgcaggtctgg
acgctgctgctgctgtggctcgacgccatggaggccgacaagagcgccgccgtcgacgtg
ctctcgtttctcttcgtcctggccagcctggacctcggccgcgcgtatgacacaaacgcc
ctcaccgagcagcgccgcgacatgctccccgcgctcgccgactttggcctcgtctacatc
cccccgcagaagcgctccatgttcttccccacgcgcctcgccacgacgctcaccagcggc
gccggcagcagcagccttcgcagcatcagcgacggtgtcgcggccgccacctcggccgcc
ctctcctcctcctcctccgccaacccgaacccgtcaagcagtaacagcagcggcccgctc
ggcagctccggcgatcagaccggctccgtcgtcatcgagaccaactaccgcctctacgcg
tacacgcagtcgacgctgcaaatcgccgtcctcgccctcttctccaagctcggcatgcgc
ttccccgacatggtcgccggccgcatcacccgcacctccatccgccaggccatccagttc
ggcatcaccgccgaccagatcatcgcctacctcgccgcccacgcccacgagcagatgcac
cgcaccgccgccctcaccagcaaacccgtcctgcccccgaccgtcgtcgaccagatccgc
ctctggcagctcgagaacgagcgcatgaagacgacgggcggcttcctgttccgcgacttt
gacgacaccaaggagtaccaggacacgaggcgcttcgccgacgagattggcgtcctggtc
tggagcaacgacaagacgggcatgttcttcgccagcaagtttgagcagatacgcgactac
ctcaagagtaggaaaaaggctgaatga

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