KEGG   Akanthomyces muscarius: LMH87_011707
Entry
LMH87_011707      CDS       T09501                                 
Name
(RefSeq) hypothetical protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
amus  Akanthomyces muscarius
Pathway
amus03030  DNA replication
amus03410  Base excision repair
amus03420  Nucleotide excision repair
amus03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:amus00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    LMH87_011707
   03410 Base excision repair
    LMH87_011707
   03420 Nucleotide excision repair
    LMH87_011707
   03430 Mismatch repair
    LMH87_011707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amus03032]
    LMH87_011707
   03400 DNA repair and recombination proteins [BR:amus03400]
    LMH87_011707
Enzymes [BR:amus01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     LMH87_011707
    6.5.1.6  DNA ligase (ATP or NAD+)
     LMH87_011707
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     LMH87_011707
DNA replication proteins [BR:amus03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    LMH87_011707
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     LMH87_011707
DNA repair and recombination proteins [BR:amus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     LMH87_011707
   NER (nucleotide excision repair)
    Other NER factors
     LMH87_011707
   MMR (mismatch excision repair)
    Other MMR factors
     LMH87_011707
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 80898866
NCBI-ProteinID: XP_056052698
LinkDB
Position
4:complement(3080825..3083974)
AA seq 959 aa
MQRYVRRVAATIASDKNHSYHYLIGGPLYYSGGVADSSKERIDSRSPKVSSRRPCGKLWP
SPSLPHCRFFTLASSGVLGRLVLRHTISAASVLQRAHTPRFSTMAPKQATLGKFFGSKSD
GPARQSKLAFSAKPKSEAETADDGSSTKENTDPDSDSKKRVRLEANGDSKASIKPEEDEE
SAPVAKRPRRSRVRRVEDDDEDIVPTTETVKKEEHMDSPVKVESSVEPSPEPSPEPLVKK
EKDVDQEFKEEAAAESGSDVEGDADLEEKPEVAAKARQLAQTKLNSKIKDPYPDWKPGAP
VPYAALCTTFSLIEMTTKRLIIMEHCALFLRQVMRLTPDDLLPTVLLMINKLAPDYAGIE
LGIGESLIMKAIGESTGRSLQVIKADQKDIGDLGLVALKSRSTQPTMFKPKPLTVRGVHQ
GLMGIATVTGNGAQGRKVDGIKKLLSASDAHNTGKVDITKDKGGPSEAKYIIRFLEGKLR
LGLAEKTVLVSLAQAVVCHEADKRGKLPSTSDMEKGESILKTVYSELPSYDVIIPAMLSH
GILNLRDQCKLQPGVPLKPMLAKPTKAITEVLDRFEGQTFTCEYKYDGERAQIHYVAKDA
PQELSQAAPGANKEAAKGVASIFSRNSEDLSKKYPDILAKLHTWVKEDTMSFVLDCETVA
WDTVEKTVLPFQQLMTRKKKDVKVEDVKVKVCVFAFDLLYLNGQPVVESSLRERRELLQQ
AFTPVEGEFSFATSMDGQELDDIQVFLDESVKASCEGLMVKMLDGKESGYEPSKRSRNWL
KIKKDYLSGVGDSLDLVVLGAYYGRGKRTSVYGAFLLACYNPNSDSYETVCNIGTGFSEQ
VLEELHASLSAITIDRPKPFYSHSSGNQHQPDVWFEPQYVWEVKTADLTLSPRYKAGCKE
GVDPAGGKGISLRFPRFIKIRDDKKPDEATSSRQVAEMYRKQESVTKNKGPSVDDDFEY
NT seq 2880 nt   +upstreamnt  +downstreamnt
atgcagcgatacgttcggcgcgtcgcagcaacgatagccagcgacaaaaatcacagctac
cactatttaattggcggccctctctattactcgggcggcgttgctgacagttccaaagaa
cgcatagactcccgatcgccgaaagtttcctcccgcaggccctgtggcaaactctggccc
tcgcccagcctgccgcattgccgcttcttcacgctggcttcaagcggagtattgggacga
ttggtgctgcgccatactatttctgccgcatcggtgcttcaacgagcacacaccccaaga
ttcagcaccatggcgcccaagcaggcgactttgggcaaattcttcggctccaagtccgat
ggaccagctcgacaatctaagcttgccttctcggcaaagcccaagagtgaggcagaaact
gccgacgatggctcaagcacgaaagaaaacacagatccagactctgactcgaaaaagcgc
gttcgattagaggcaaacggcgactcgaaggcatcgatcaaaccggaggaagacgaagaa
agcgctccagttgcgaagcgcccccgacgcagccgagtaagaagggttgaggacgatgac
gaggatattgtccctacaacagagacggtcaagaaagaggagcacatggactcgcccgtc
aaggttgaatcctctgttgagcccagtcccgagcctagtcccgagccgttggtcaagaag
gagaaagacgtcgaccaagaattcaaggaggaggccgcggctgaatctggctctgatgtc
gaaggcgatgcagatttggaagagaagcccgaagttgccgccaaggcgcgtcagctggct
cagaccaaactcaactcaaaaatcaaggatccatatcccgactggaagcctggtgccccc
gtcccatacgctgccttgtgcacaactttttccctcattgaaatgactaccaagcgactg
atcatcatggaacactgtgcgcttttcttacgccaagtcatgcgcctaactcccgacgac
ctactccccacagtcttgctcatgatcaacaagctggctcccgactatgctggtatcgaa
cttggtatcggcgagtcgctcattatgaaggctattggcgagtccactggaagaagtctg
caagtcatcaaggccgaccagaaggatatcggtgatctcggcctcgtcgctctaaagagc
agatctacacaaccaaccatgttcaagccgaagccactgacagttcgcggtgtgcatcag
ggcctaatgggcattgccactgtcactggaaacggagcgcaagggcgcaaggtcgacggt
atcaagaagcttctctctgcttctgatgcccacaatactggcaaggtcgatataacaaaa
gacaagggcggtcccagcgaggccaagtacattattcgatttctcgaaggcaagcttcga
ctgggcctagcagaaaaaaccgtactagtatcgcttgcgcaggccgttgtatgccacgag
gccgacaagcgtggcaagctgcctagcacgtcggacatggaaaagggcgagagtatcctt
aagacagtttacagcgagttgccgagttacgatgtcatcatccctgccatgctctcccat
ggtattctcaatttacgtgatcagtgcaagttgcaacctggtgtgccgctgaagcccatg
ttggccaaacctaccaaagccatcaccgaagttctagatcgctttgagggccaaacgttc
acctgcgaatacaagtacgacggcgagcgcgctcagatccattacgtggccaaggatgct
ccccaggagctcagccaggcagcgccgggtgctaacaaagaagccgccaagggagtggcc
agcatcttctctcgcaactcagaagacctgtctaagaagtaccccgatattctggccaag
ctgcacacttgggtcaaggaagacaccatgagctttgtgcttgactgcgagactgtagcc
tgggatacggtggaaaagacggtactacccttccagcagctcatgaccagaaagaagaag
gacgtcaaagtggaagacgttaaggtcaaggtctgcgtatttgcctttgatctcctctac
ctgaatggccagcccgtcgtggaaagttcactgcgggagcgaagagagcttctacaacag
gcgttcacacctgtggaaggcgagttttcttttgccacttccatggatggccaggagctc
gatgatattcaagtgttcctggacgaaagtgtcaaggcctcttgtgaaggccttatggtg
aagatgctggacggcaaagagagtggatacgagcccagtaagcgaagtcgaaactggctc
aagatcaagaaggattacctctctggtgtcggcgactccttggatctcgtcgtcctgggc
gcctactacggccgcggcaagcgcacgtccgtctatggcgcttttctgctcgcctgctac
aaccccaactcggatagctacgagaccgtgtgcaacattggcacgggcttctccgagcag
gtcctcgaggagctgcacgcgtctctgtccgccattaccatcgaccgccccaagcccttt
tactcgcactcgtccggcaatcagcaccaacccgacgtctggttcgagccccagtacgta
tgggaggtcaagacggctgacctcactctcagcccgcgctacaaggccggctgcaaggag
ggcgtcgaccccgccggcggcaagggcatcagtctgcgcttcccgcgcttcatcaagatt
cgcgacgacaagaagcccgacgaggccacgtcgagtcggcaggtggcggaaatgtaccgc
aagcaggagagcgtgaccaagaacaagggtccgtctgtggatgacgactttgagtactaa

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