Acidiphilium multivorum: ACMV_17990
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Entry
ACMV_17990 CDS
T01446
Symbol
mfd
Name
(GenBank) transcription-repair-coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
amv
Acidiphilium multivorum
Pathway
amv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACMV_17990 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amv03400
]
ACMV_17990 (mfd)
Enzymes [BR:
amv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACMV_17990 (mfd)
DNA repair and recombination proteins [BR:
amv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
ACMV_17990 (mfd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRCF
DEAD
UvrB_inter
Helicase_C
CarD_TRCF_RID
MFD_D3
ResIII
UB2H
RecG_dom3_C
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
BAJ81146
UniProt:
F0IZD6
LinkDB
All DBs
Position
complement(2006629..2010063)
Genome browser
AA seq
1144 aa
AA seq
DB search
MSLLTVYGAPEGFDADLIARRAAEAGTVLHIARDDARLARLEDALAFFAPAAEIIRFPAW
DCLPYDRVSPNPAIVADRVAALARLLEPAKGTRIVLTTVNAAVQRTPPRARFADASRTIA
PGGAAPPDDLARFLEQRGYHRVGTVMEPGDFAVRGGIFDVWPSGEPAPARIDLFGDTVDT
LRRFDPGTQRSGEALPSLTFRPASELPLDADSISRFRTGFRELFGAEALTDPLYESVSEG
RRHPGMEHFAPLFCATMETVFDYAPGAAISLDHQAEEAAAARFEMIADHYEARSAPPRAG
EAPYRPVAPARLYLDRAGLDALLRARGATVFSPFSRPEGAEGVEAGGRPGAILASAQGIA
SVYEEFRLLAARWREAGRRVVLAAWSAGSRDRLAALLRDHGMRSIPIDNAAEARIAQGDA
VLLAVLGLERGYVADDLAIVAEQDLLGQRIARPPRRRQRADQFIADATEIAEGDLVVHQD
HGIGRYDGLVTLSVEGAPHDCLRILYDGDQKLFLPVENIDMLSRFGSETAGVGLDRLGGA
SWQARKAKARNRIRDMAAGLIRIAAERKLHDAAILAADDGAFAEFCARFPYTETEDQARA
IADVMEDLAAGKPMDRLVCGDVGFGKTEVALRAAFIAAMSGAQVAVVVPTTLLARQHYRL
FSERFAGLPIRVEQLSRLVSAKDTAKVKAGLADGTVNIVVGTHALLSKTIAFADLALLIV
DEEQHFGVAHKERLKQLKADIHVLTLTATPIPRTLQLALTGVRDLSLITTPPVDRLAVRT
FIMPWDKLVIREAIARERFRGGQIFCVVPHIEDIDRMRERLAEIAPDLRTATAHGRLPPT
EIERVMTEFSEGKHDVLLATNIVESGLDMPAVNTILIWRADLFGLGQLYQLRGRVGRGKQ
RGYAYLTWPASHTLAASSQKRLEVMQTLDTLGAGFTLASHDLDLRGAGNLLGDEQSGHIR
EVGIELYQQMLEDAVAELRAAGGSESREAARDWTPNISLGLPVLIPEAYVADLPVRLGLY
RRIGGLATDAESEALAAELVDRFGPMPEEVENLLATVALKRACRAVGVEKLEAGPKGMVV
AFRGNAFANPGGLVAWLATRAGLLRLRPDHKLVMVREMDVKARLAAARDIISNLQRIIDQ
SKAA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctcaccgtctacggcgcgccggaagggttcgacgccgacctgatcgcccgc
cgcgccgccgaggcgggcacggtgctgcacatcgcgcgcgacgatgcccgcctcgcccgg
ctggaggacgcgctcgccttcttcgcccccgccgccgagatcatccgcttccccgcctgg
gactgcctgccctacgaccgcgtctcgcccaacccggcgatcgtggccgaccgcgtcgcc
gccctggcccggctgctggaaccggcgaagggcacccgcatcgtgctgaccacggtgaac
gccgcggtccagcgcaccccgccgcgcgcgcgcttcgccgatgccagccgcaccatcgcc
cccggcggcgccgccccgccggacgatctcgcccgcttcctcgaacagcgcggctatcac
cgcgtcggcaccgtcatggagccgggcgacttcgccgtgcgcggcggcattttcgacgtc
tggccctccggcgagccggcgccggcccgcatcgacctgttcggcgacacggtggacacg
ctccgccgcttcgacccaggcacccagcgcagcggcgaggcgctgccctcgctcaccttc
cgccccgcctccgaactcccgctcgacgccgactcgatcagccgcttccgcaccggcttc
cgcgagctgttcggcgccgaggcgctgaccgacccgctctacgaatcggtctccgagggc
cgccgccatcccggcatggagcatttcgcgccgctcttctgcgcgacgatggaaaccgtg
ttcgactatgcgcccggtgccgccatcagcctcgaccaccaggccgaggaggccgccgcc
gcccgcttcgagatgatcgccgatcactacgaggcccgctccgccccgccccgcgccggc
gaggcgccgtaccggccggtcgcgcccgcgcgcctctatctcgaccgcgccggcctcgat
gcgctgctccgcgcccgcggggcaaccgtgttctcgcccttctcccggcccgagggcgcc
gagggcgtggaagccggcggccgccccggcgccatcctcgcctccgcccagggcatcgcc
tcggtctatgaggaattccgcctgctcgccgcccgctggcgcgaggccgggcgccgcgtc
gtcctcgccgcatggtccgccggctcgcgcgaccgtctcgccgccctgctgcgcgaccac
ggcatgcgctcgatcccgatcgacaacgccgccgaggcccgcatcgcccagggcgacgcc
gtgctgctcgccgtcctcggcctcgaacgcggctatgtcgccgacgatctcgccatcgtc
gccgagcaggacctgctcggccagcgcatcgcccgcccgccgcgccgccgccagcgcgcc
gaccagttcatcgccgacgccaccgaaatcgccgagggcgatctcgtcgtgcatcaggat
cacggcatcggccgctatgacgggctggtgacgctgagcgtcgagggcgcgccgcatgac
tgcctgcgcatcctctatgatggcgaccagaagctcttcctgccggtcgagaacatcgac
atgctctcccgcttcggcagcgagaccgccggcgtcgggctcgaccgcctgggcggcgcc
tcctggcaggcgcgcaaggccaaggcccgcaaccgcatccgcgacatggcggccggcctc
atccgcatcgccgccgagcgcaagctgcacgacgccgcgatcctcgccgccgatgacggc
gccttcgccgaattctgcgcccgcttcccctacaccgaaaccgaggaccaggctcgcgcc
atcgccgacgtgatggaagatctcgccgccggcaagccgatggaccggctggtctgcggc
gatgtcggcttcggcaagaccgaggtcgcgctccgcgccgccttcatcgccgcgatgtcc
ggcgcccaggtcgccgtggtggtgccgaccacgctgctcgcccgccagcactaccgcctg
ttctccgagcgcttcgccggcctgcccatccgcgtcgagcagctctcccgcctcgtctcc
gccaaggataccgcgaaggtgaaggccggcctcgccgacggcacggtgaacatcgtcgtc
ggcacccatgcgctgctgtcgaaaacgatcgccttcgccgacctcgcgctgctgatcgtc
gacgaggagcagcatttcggcgtcgcccacaaggaacggctgaagcagctcaaggccgac
atccacgtcctcaccctgaccgcgacgccgatcccccgcaccctccagctcgcgctgacc
ggcgtgcgcgacctctcgctgatcaccaccccgccggtcgaccgtctcgccgtgcgcacc
ttcatcatgccgtgggacaagctggtgatccgcgaggccatcgcccgcgagcgcttccgc
ggcgggcagatcttctgcgtcgtcccgcatatcgaggatatcgaccggatgcgcgagcgc
ctggccgagatcgcgccggacctgcgcaccgccaccgcccatggccgcctgccgccgacc
gagatcgagcgggtgatgaccgagttcagcgaaggcaagcacgacgtcctgctcgccacc
aacatcgtcgaatccgggctcgacatgccggcggtgaacaccatcctgatctggcgcgcc
gatctcttcggcctcggccagctctaccagctgcgcggccgcgtcggccgcggcaagcag
cgcggctacgcctatctcacctggccggcctcgcacacgctcgccgcctcctcgcaaaag
cgcctcgaagtgatgcagacgctcgacacgctcggcgccggcttcaccctcgcctcgcac
gatctcgacctgcgcggcgccggcaacctgctgggcgacgaacagtccggccatatccgc
gaggtcggcatcgagctctaccagcagatgctggaggatgcggtggccgaactgcgcgcg
gccggcggcagcgaatcgcgcgaggccgcgcgggactggacgccgaatatcagcctcggc
ctgcccgtcctcatccccgaagcctatgttgccgacctgccggtccgcctcggcctctac
cgtcgcatcggcggactcgcgaccgatgccgagagcgaggcgctcgccgccgagctggtc
gaccgtttcggcccgatgcccgaggaggtggaaaacctcctcgccacggtggcgctgaag
cgcgcctgccgcgccgtcggcgtcgagaagctggaggccgggccgaagggcatggtcgtc
gccttccgcggcaacgcattcgccaatcccggcggcctcgtcgcctggctcgccacccgc
gccggcctgctccgcctgcgcccggaccacaagctggtcatggtccgcgagatggacgtg
aaggcccgcctcgccgcggcccgcgacataatatcgaacctgcaacgcattatcgaccag
tcgaaggcggcatga
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integrated database retrieval system
