Amycolatopsis sp. YIM 10: YIM_05720
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Entry
YIM_05720 CDS
T06270
Symbol
kgd
Name
(GenBank) Multifunctional 2-oxoglutarate metabolism enzyme
KO
K01616
multifunctional 2-oxoglutarate metabolism enzyme [EC:
2.2.1.5
4.1.1.71
1.2.4.2
2.3.1.61
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy00020
Citrate cycle (TCA cycle)
amyy00630
Glyoxylate and dicarboxylate metabolism
amyy00785
Lipoic acid metabolism
amyy01100
Metabolic pathways
amyy01110
Biosynthesis of secondary metabolites
amyy01120
Microbial metabolism in diverse environments
amyy01200
Carbon metabolism
amyy01210
2-Oxocarboxylic acid metabolism
Module
amyy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amyy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
YIM_05720 (kgd)
00630 Glyoxylate and dicarboxylate metabolism
YIM_05720 (kgd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
YIM_05720 (kgd)
Enzymes [BR:
amyy01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
YIM_05720 (kgd)
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.5 2-hydroxy-3-oxoadipate synthase
YIM_05720 (kgd)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.61 dihydrolipoyllysine-residue succinyltransferase
YIM_05720 (kgd)
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.71 2-oxoglutarate decarboxylase
YIM_05720 (kgd)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
2-oxoacid_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
QFU86362
UniProt:
A0A5P9PE39
LinkDB
All DBs
Position
complement(1146901..1150635)
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AA seq
1244 aa
AA seq
DB search
MSSSSPASQFGPNEWLVEEMYDQFLADPSSVDAAWHDFFADFKPTQDAQAKADNARASAR
SEAATSPNGQGHQPSAKSQQNADSAARQSSATVSEPAKAPAKPAPAKAAPAKKAEPAPAA
KTEPKTETKNTQAESKPLRGAAAAIAKNMDASLSVPTATSVRAVPAKLMADNRIVINNHL
KRTRGGKISFTHLIGYAMVRALRDFPNMNRHYQLIDGKPFAVTPEHVNFGLAIDMKGKEG
ARTLVVASIKATENMSFLQFWQAYEEIVKKARNNKLTADDFAGTTISLTNPGGIGTNHSV
PRLQAGQGCIIGVGAMQYPASFEGTSEKTLVDLAVSKIMTLTSTYDHRIIQGAESGEFLK
RIHELLLGSDGFYDDVFTSLRLPYEPIRWVADIPEGAVDKTARVIELIDAYRMRGHLMAD
TDPLNYRQRRHEDLDVLTHGLTLWDLDREFPVGGFAGQERMKFRDILGVLRNSYCRTVGI
EYTHIIDPDERRWIQDRVEIPHEKPDPAVQKYVLSKLNAAEAFETFLQTKYVGQKRFSLE
GGETTIPLLDTVLDKAAEYELDEVVIGMPHRGRLNVLANIVGKPISQIFQEFEGNLDPGQ
AHGSGDVKYHLGAEGKYFRMFGDGETKVSLTANPSHLETVDPVLEGIVRAKQDILDKGGE
GFTVLPVLLHGDAAFAGQGVVAETLNLALLRGYRTGGTVHLIINNQVGFTTAPENSRSSQ
YATDVAKMIGAPVFHVNGDDPEAAHWVAKLAVDYRQAFNKDVVIDLICYRRRGHNEGDDP
SMTQPAMYDIIDTKRSVRKTYTESLIGRGDISVEEAEAALRDFSSQLEHVFNEVRELEKH
PVKASPSVEEEQQVPAKVPTAISKDVLEHIGDAFVNVPEGFTPHPRVKPVMERRHKMSRE
GGIDWAFGELLAFGSLALEGKLVRLSGQDSRRGTFTQRHSVFIDRKTGEEYSPLQHLAEN
QGRVMIYDSALSEYAAVGFEYGYSVANSDALVMWEAQFGDFVNGAQTVIDEYISSGEAKW
GQLSDVVLLLPHGHEGQGPDHTSGRIERFLQLCAEGSMTVSVPSTPANYFHLLRRHALDG
VNRPLVVFTPKRLLRDKAVKSSIEEFTEQSKFMSVIDDGDIDPGKVRKVLLTSGKMYWEL
LAEREKQGITDVALVRVEQYYPLPKKKLLAAVERYTAASSIMWVQEEPENQGAWPFFGLN
LPRKFPETFGGLEVAARRPMAAPSAGSSKVHEVEQKAIIAKAFS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcagcagccctgcgtcacagttcggccccaacgagtggctggtcgaagagatg
tacgaccagttcctggccgacccttcatcggtagatgccgcttggcatgacttcttcgcc
gacttcaagcccacccaggacgcgcaagcgaaggccgacaacgcccgcgcgagcgccagg
tcggaagccgcgaccagcccgaacggccagggtcaccagccgtcggccaagtcgcagcag
aacgccgactcggcggcccgccagtcctcggcgacggtgagcgagcccgcgaaggcaccg
gccaagccggcccccgcgaaggccgccccggcgaagaaggccgaaccggcccccgccgcg
aagaccgaaccgaagactgagaccaagaacacccaggccgagagcaagccgctgcgtggc
gcggccgccgcgatcgccaagaacatggacgcctcgctgtcggtgccgaccgcgaccagc
gtgcgcgcggtgcccgccaagctgatggcggacaaccgcatcgtgatcaacaaccacctg
aagcggaccaggggcgggaagatctccttcacccacctcatcggctacgcgatggtgcgc
gcgctgcgcgacttcccgaacatgaaccggcactaccagctgatcgacggcaagccgttc
gcggtgaccccggagcacgtgaacttcgggctggcgatcgacatgaagggcaaggaaggc
gcccgcacgctggtggtggcctccatcaaggccaccgagaacatgagcttcctgcagttc
tggcaggcctacgaggagatcgtcaagaaggcccgcaacaacaagctcaccgccgacgac
ttcgccggcaccaccatctcgctgaccaaccccggcggcatcggcaccaaccactcggtg
ccgcggctgcaggcgggccagggctgcatcatcggcgtcggcgccatgcagtacccggcc
tcgttcgagggcaccagcgagaagacactggtcgacctggccgtcagcaagatcatgacg
ctgacctccacctacgaccaccgcatcatccagggcgcggagtccggcgagttcctcaag
cgcatccacgagctgctgctcggctcggacggcttctacgacgacgtcttcaccagcctg
cgcctgccctacgagccgatccgctgggtcgccgacattcccgagggcgcggtcgacaag
accgcccgcgtgatcgagctgatcgacgcctaccgcatgcgcggccacctgatggccgac
accgacccgctgaactaccgccagcggcgccacgaggacctcgacgtgctcacccacggg
ctcaccctgtgggacctggaccgcgagttcccggtgggcgggttcgccggccaggagcgg
atgaagttccgcgacatcctcggtgtgctgcgcaactcgtactgccgcacggtcggcatc
gagtacacgcacatcatcgaccccgacgagcgccggtggatccaggaccgcgtggagatc
ccgcacgagaagccggatcccgccgtgcagaagtacgtgctgtccaagctgaacgcggcc
gaggccttcgagaccttcctgcagaccaagtacgtcggtcagaagcggttctccctcgaa
ggcggcgagaccaccatcccgctgctggacaccgtgctggacaaggccgccgagtacgag
ctggacgaggtcgtcatcggcatgccgcaccgcggcaggctgaacgtgctggccaacatc
gtcggcaagccgatctcgcagatcttccaggagttcgagggcaatctcgaccccggccag
gcacacggctccggtgacgtgaagtaccacctcggtgccgagggcaagtacttccgcatg
ttcggcgacggggagaccaaggtctcgctgaccgcgaacccgtcgcacctggagacggtc
gacccggtgctcgagggcatcgtccgcgccaagcaggacatcctcgacaagggcggcgag
ggcttcaccgtgctgccggtgctgctgcacggcgacgcggcgttcgccggtcagggcgtg
gtcgccgagacgctgaacctggcgctgctgcgcggttaccgcaccggcggcacagtgcac
ctgatcatcaacaaccaggtcggcttcaccaccgcgccggagaactcgcggtcctcgcag
tacgccaccgacgtggcgaagatgatcggcgcgccggtcttccacgtcaacggcgacgac
ccggaggccgcgcactgggtggccaagctggccgtggactaccgccaggcgttcaacaag
gacgtggtgatcgacctcatctgctaccgccgccgcgggcacaacgagggcgacgacccg
tcgatgacgcagccggcgatgtacgacatcatcgacaccaagcgcagcgtgcggaagacc
tacaccgaatcgctgatcggccgcggggacatctccgtggaagaggccgaggccgcgctg
cgggacttctccagccagctggagcacgtcttcaacgaggtccgcgagctggagaagcac
ccggtcaaggcgagcccctcggtcgaggaggagcagcaggtgcccgcgaaggtgccgacg
gccatctccaaggacgttctcgagcacatcggcgacgcgttcgtcaacgtgccggagggc
ttcaccccgcacccgcgcgtcaagccggtgatggagcgccgccacaagatgtcccgcgaa
ggcggcatcgactgggccttcggcgagctgctggcgttcggctcgctggcgctggagggc
aagctggtgcggctgtccggtcaggactcccgccgcggcaccttcacccagcggcactcg
gtgttcatcgaccgcaagaccggcgaggagtactccccgctgcagcacctggccgagaac
cagggccgcgtgatgatctacgactcggcgctgtccgagtacgcggcggtcggcttcgag
tacggctactcggtggccaactccgacgcgctggtgatgtgggaagcccagttcggcgac
ttcgtcaacggcgcgcagaccgtcatcgacgagtacatctcctccggtgaggccaagtgg
ggccagctctccgacgtggtgctgctgctgccgcacggccacgagggccagggcccggac
cacacctccggccgcatcgagcggttcctgcagctgtgcgccgagggttcgatgaccgtg
tcggtgccctcgaccccggcgaactacttccacctgctgcgccgccacgccctcgacggc
gtgaaccggccgctggtggtcttcacccccaagcgcctgctgcgcgacaaggcggtgaag
tcgtccatcgaggagttcaccgagcagtcgaagttcatgtccgtgatcgacgacggcgac
atcgaccccggcaaggtccggaaggtgctgctgacctcgggcaagatgtactgggagctg
ctcgccgagcgcgagaagcagggcatcaccgacgtcgcgctggtccgggtcgagcagtac
tacccgctgccgaagaagaagctgctggccgcggtggagcggtacacggcggcttcgtcg
atcatgtgggtccaggaggagccggagaaccagggtgcctggccgttcttcgggctgaac
ctgccgcggaagttcccggagaccttcgggggcctcgaagtggcggcacgccgtccgatg
gcggcgccgtcggcgggttcgtccaaggtgcacgaggtggagcagaaggcgatcatcgcc
aaggccttcagctga
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