Amycolatopsis sp. YIM 10: YIM_41605
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Entry
YIM_41605 CDS
T06270
Symbol
rph
Name
(GenBank) Ribonuclease PH
KO
K00989
ribonuclease PH [EC:
2.7.7.56
]
Organism
amyy
Amycolatopsis sp. YIM 10
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amyy03016
]
YIM_41605 (rph)
Enzymes [BR:
amyy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.56 tRNA nucleotidyltransferase
YIM_41605 (rph)
Transfer RNA biogenesis [BR:
amyy03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
YIM_41605 (rph)
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
COXG
Motif
Other DBs
NCBI-ProteinID:
QFU93458
UniProt:
A0A5P9PYH3
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Position
complement(8955117..8955890)
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AA seq
257 aa
AA seq
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MARKDGRNDDQLREVKITRGFQQWPAGSVLIEFGNTRVLCAASVNEGVPRWRAGSGLGWI
TAEYAMLPSATNTRSDRESVKGRVGGRTHEISRLIGRSLRACIDLAALGENTIMIDCDVI
QADGGTRTAAITGAYVALADAITWLGAAGRLADPQPLATSVAAVSVGVVDGRVRLDLPYE
EDSRAEVDMNVVATDAGTLIEVQGTGEGATFQRSTLDTMLDFALAGCAQLVEKQNEALAL
PYPGELPEPKPDKKAKK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtggcgagaaaagacggcaggaacgacgaccagctccgcgaagtcaagatcacccgcggc
ttccagcagtggccggccggctcggtgctcatcgagttcggcaacaccagggtgctgtgc
gcggcgagcgtgaacgagggcgtgccgaggtggcgggccggttccgggctcggctggatc
accgccgagtacgcgatgctgccctcggccaccaacacccgcagcgaccgcgaatcggtc
aagggccgggtcggcggccgcacgcacgagatcagccgcctgatcggccgctcgctgcgt
gcctgcatcgatctggccgcgctcggcgagaacacgatcatgatcgactgcgacgtgatc
caggccgacggcgggaccaggaccgcggccatcaccggggcctacgtcgcgctcgccgac
gcgatcacctggctcggcgcggcgggcaggctggccgacccgcagccgctggcgacctcg
gtggccgcggtcagcgtcggcgtcgtcgatggccgcgtgcggctcgacctgccgtacgag
gaggactcgcgcgccgaggtggacatgaacgtggtggccaccgacgccggcacgctgatc
gaggtccagggcaccggcgagggcgccaccttccagcggtccactttggacaccatgctg
gacttcgcgctggccgggtgcgcgcagctggtggagaagcagaacgaggcgctggcgctg
ccctacccgggtgagctgccggagccgaagccggacaagaaggccaagaagtga
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