Amycolatopsis sp. YIM 10: YIM_42440
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Entry
YIM_42440 CDS
T06270
Symbol
tag
Name
(GenBank) DNA-3-methyladenine glycosylase 1
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
amyy
Amycolatopsis sp. YIM 10
Pathway
amyy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amyy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YIM_42440 (tag)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amyy03400
]
YIM_42440 (tag)
Enzymes [BR:
amyy01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
YIM_42440 (tag)
DNA repair and recombination proteins [BR:
amyy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YIM_42440 (tag)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
HhH-GPD
Chi-conotoxin
Motif
Other DBs
NCBI-ProteinID:
QFU93623
UniProt:
A0A5P9PZJ5
LinkDB
All DBs
Position
complement(9127184..9127747)
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AA seq
187 aa
AA seq
DB search
MSLVGADGISRCSWGNSSPDYAEYHDKEWGYPLRGEQALFERLSLEAFQSGLSWIVILRK
RPAFRAAFSSFDPAAVAAFDDDDISRLLADTGIVRNRAKIEATIRNARAVADLDQPLGEL
LWSFAPSSSPRPATMDDVPAITPESRAMAKTLKKLGFAFVGPTTCYALMQATGMVDDHVA
GCFRASA
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgagcttggtgggcgcggacgggatttcgcggtgttcctgggggaattcttcgcccgat
tacgcggaataccacgacaaggaatggggctaccccttgcgtggtgaacaggcccttttc
gaacggttgtcgctggaggcattccagtcgggtttgtcctggatcgtcatcctgcgcaaa
cgccccgctttccgcgcggctttctcttcttttgatccggcggcagtcgccgccttcgac
gatgacgacatctcccgtttgctggcggacaccggcatcgtccggaaccgggcgaagatc
gaagccaccattcgcaacgctcgcgccgtcgccgacctggaccagcccctgggcgagttg
ctgtggtccttcgcgccttcgtcgtcgccacgccccgccaccatggacgacgtccccgcc
atcaccccggaatcgcgggccatggcaaaaaccctgaaaaaactcggcttcgccttcgtg
ggtccaacgacctgctacgccctcatgcaagccaccggcatggtcgacgaccacgtggcc
ggctgcttccgagcttccgcctga
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