Amycolatopsis mediterranei RB: B737_0560
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Entry
B737_0560 CDS
T02804
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00521
Streptomycin biosynthesis
amz00523
Polyketide sugar unit biosynthesis
amz00541
O-Antigen nucleotide sugar biosynthesis
amz01100
Metabolic pathways
amz01110
Biosynthesis of secondary metabolites
amz01250
Biosynthesis of nucleotide sugars
Module
amz_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
B737_0560 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
B737_0560 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
B737_0560 (rfbC)
Enzymes [BR:
amz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
B737_0560 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AGT81224
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Position
complement(580942..581490)
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AA seq
182 aa
AA seq
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MKAIPVPEIDGAYLFEPTPHADQRGFFSRTFDRDVVASVGIDPDGFVQDSLSRSRKGVVR
GMHLRGGAGEAKLVRCSHGAIFDVVVDLRPDSPTFRNVKTFELSGENQVSVYIPAGCAHG
FQSLTDPSDVSYRIDRTHDPEEDITISYKDPELDISWPLSVTMVSDRDERAPSLEEALKP
TR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccattccggtgcccgagatcgacggtgcgtatctgttcgaacccacaccgcac
gcggaccagcgcggctttttcagccggacgttcgaccgtgacgtcgtcgcgtcggtgggc
atcgacccggacggcttcgtccaggacagtctttcccgctcccgcaagggggtcgtccgc
gggatgcacctgcgcggcggggccggtgaggcgaagctggtgcggtgttcgcacggcgcg
atcttcgacgtcgtggtggatctccgaccggattcgccgacattccggaatgtgaaaacc
ttcgaactatccggtgagaaccaggtttccgtgtacatcccggcggggtgcgcgcacgga
ttccagtcacttacggatccctcggatgtttcgtaccgtatcgatcggacacacgatcct
gaagaagacattacgatttcgtacaaagaccctgaattggacatttcttggccactgtcg
gtcacaatggtcagtgatcgggacgaacgggcgccctctctggaagaggcgttgaaacca
acgaggtga
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