Amycolatopsis mediterranei RB: B737_8735
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Entry
B737_8735 CDS
T02804
Symbol
gadB
Name
(GenBank) glutamate decarboxylase
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
amz
Amycolatopsis mediterranei RB
Pathway
amz00250
Alanine, aspartate and glutamate metabolism
amz00410
beta-Alanine metabolism
amz00430
Taurine and hypotaurine metabolism
amz00650
Butanoate metabolism
amz01100
Metabolic pathways
amz01110
Biosynthesis of secondary metabolites
amz01120
Microbial metabolism in diverse environments
amz02024
Quorum sensing
Module
amz_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
amz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
B737_8735 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
B737_8735 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
B737_8735 (gadB)
00430 Taurine and hypotaurine metabolism
B737_8735 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
B737_8735 (gadB)
Enzymes [BR:
amz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
B737_8735 (gadB)
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Paralog
Gene cluster
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Motif
Pfam:
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
AGT89395
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All DBs
Position
complement(9731459..9732847)
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AA seq
462 aa
AA seq
DB search
MVLHQGKAGRPDRTAGTNPLYAGANPALAAGFVMPHDKLREDSLPPDTALQLVRDELMLD
GNARLNLATFVTTWMEPQARELMAECVDKNMIDKDEYPQTAELERRCVNILADLWHAPDP
GDVMGCSTTGSSEACMLAGMALKRRWSKLGRTGKPNLVMGANVQVCWEKFCEYWEVEPRL
VPMDGDRYHLTADEAVARCDENTIGVVAILGSTFDGSYEPVAEIAAALDSLEERTGWDIP
VHVDGASGAMIAPFLDPHLEWDFRLPRVASINTSGHKYGLVYPGVGWVLWRDKAALPSEL
VFNVNYLGGDMPTFALNFSRPGAEVAAQYYTFVRLGREGFRAVQQASRDVALHLSSGIAS
LGPFSLLTRGDQLPVFAFTTRPDVGFDVFDVSRRLRERGWLVPAYTFPENRTDLAVLRIV
VRNGFTHDLADLLLADLRRVLPELEQFGGRPKDPAKATAFHH
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggtcttgcatcaggggaaagccggccgcccggaccgcacggcggggacgaacccgctc
tacgccggagcgaatccggcgctcgcggcgggcttcgtcatgccgcacgacaagctgcgt
gaggactcgctgccgccggacaccgcgctgcagctcgtgcgcgacgagctgatgctcgac
ggcaacgcgcggctcaacctcgccaccttcgtcacgacgtggatggagccgcaggcgcgt
gagctgatggccgagtgcgtcgacaagaacatgatcgacaaggacgagtacccgcagacg
gccgagctcgagcggcgctgcgtgaacatcctggccgacctgtggcacgcgcccgacccg
ggcgacgtcatgggctgctcgacgaccgggtcgtcggaagcgtgcatgctcgccgggatg
gcgctgaagcggcgctggtccaagctcgggcgcaccgggaagccgaacctggtgatgggc
gcgaacgtccaggtgtgctgggagaagttctgcgagtactgggaagtcgagccgcggctg
gtcccgatggacggcgaccgctaccacctcaccgccgacgaagccgtggcgcgctgcgac
gagaacaccatcggcgtggtggcgatcctgggctcgacgttcgacggcagttacgagccg
gtcgcggagatcgccgcggccctggactcgctggaagagcgcaccggctgggacatcccg
gtgcacgtcgacggcgcttcgggcgcgatgatcgccccgttcctcgacccgcacctggag
tgggacttccgcctgccgcgcgtggcgtcgatcaacacgtcgggccacaagtacgggctg
gtgtacccgggcgtcggctgggtgctctggcgcgacaaggccgcgctgccgtccgagctg
gtgttcaacgtgaactacctcggcggcgacatgccgacgttcgcgttgaacttctcccgc
ccgggcgccgaggtcgcggcccagtactacacgttcgtccggctcggccgggaagggttc
cgcgcggtgcagcaggcttcgcgtgacgtcgccctgcacttgtcgtccgggatcgcgtcg
ctggggccgttctccttgctgacccgaggtgatcagctgccggtgttcgcgttcaccacc
cgcccggacgtcggcttcgacgtcttcgacgtgtcccgccgactgcgtgagcgcgggtgg
ctggtcccggcgtacacgttccccgagaaccggacggacctggcggtgctgcggatcgtg
gtccgcaacggcttcacacacgacctggcggatctgctgctggcggatttgcggcgggtg
ctcccggagctggagcagttcggcggccgcccgaaggacccggcgaaggcgaccgcgttc
caccactag
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