Actinomyces naeslundii: ATCC27039_25900
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Entry
ATCC27039_25900 CDS
T05566
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ane
Actinomyces naeslundii
Pathway
ane03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ane00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ATCC27039_25900
09124 Replication and repair
03420 Nucleotide excision repair
ATCC27039_25900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ane03021
]
ATCC27039_25900
03400 DNA repair and recombination proteins [BR:
ane03400
]
ATCC27039_25900
Enzymes [BR:
ane01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATCC27039_25900
Transcription machinery [BR:
ane03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ATCC27039_25900
DNA repair and recombination proteins [BR:
ane03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ATCC27039_25900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BDH78464
LinkDB
All DBs
Position
complement(3016259..3017941)
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AA seq
560 aa
AA seq
DB search
MSATPSDPASPASSAPDGPLIVQSDKSVLLEVAHPRAGEARRSIAAFAELERAPEHIHTY
RITPLALWNARAAGLDAETVVHTLITHSRFPVPHALLTEIAETMSRYGRLQLLTDPAHGL
VLHATDVPVLEEVMRSKRTKGLLGARLGEADVVVHPSERGHLKQVLIKLGWPAEDLAGYV
DGEAHPITLTDSPGTFQLRPYQSEAVESFWAGGSGVVVLPCGAGKTLVGAASMAKSSTTT
LILVTNAVSARQWKEELMRFTTLTEDEIGEYSGSRKEVRPVTIATYQVLTTRRKGVYPHL
DLLDSHDWGLIVYDEVHLLPAPIFRMTADLQARRRLGLTATLVREDGREDEVFSLIGPKR
YDAPWKDLENQGWIAPAICTEVRLTLNAGERMAYATAEPEERYRLAACSPRKLPIIDALL
ARHEGESALVIGQYVDQLIEIAEHLGAPVITGSTTVRERQRLYDAFRCGEIRTLVVSKVA
NFSIDLPGASVAVQVSGSFGSRQEEAQRLGRIVRPKEDGRQAHFYTVVARDTADQEYAAH
RQRFLAEQGYAYTIIDAEDL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccacgcccagcgatcctgcgtccccggcgtcgtcggcccccgacggcccgctc
atcgtccagtccgacaagtccgtcctcctggaggtcgcccacccccgggccggtgaggcc
cgccgctccatcgcggccttcgccgagctggagcgcgcccccgagcacatccacacctac
cggatcacgccgctggcgctgtggaacgcgcgcgccgcgggcctggacgccgagacggtc
gtccacaccctcatcacccactcgcgcttcccggtgccgcacgccctgctcaccgagatc
gccgagacgatgagccgctacggccgcctccagctcctcaccgaccccgcccacggcctg
gtcctgcacgccaccgacgtgccggtcctggaggaggtcatgcgctccaagcgcaccaag
ggcctgctgggggcccggctcggggaggccgacgtcgtcgtccacccctcagaacggggc
cacctcaagcaggtgctcatcaagctgggctggccggccgaggacctggccggctacgtc
gacggcgaggcccatcccatcaccctgaccgactcccccggcaccttccagctgcgcccc
taccagtccgaggcggtggagagcttctgggcggggggctcgggcgtggtcgtcctgccc
tgcggggccggcaagaccctcgtgggcgccgcctccatggccaagagctcgacgacgacg
ctcatcctggtcaccaacgcggtctcggcgcgccagtggaaggaggagctcatgcgcttc
accaccctgaccgaggacgagatcggcgagtactccggctcgcgcaaggaggtccgcccc
gtcaccatcgccacctaccaggtcctgaccactcgccggaagggcgtctacccgcacctg
gacctgctggactcccacgactgggggctcatcgtctacgacgaggtccaccttctgccc
gccccgatcttccggatgaccgcggacctgcaggcgcgtcgccgcctgggcctgaccgcg
actctcgtgcgcgaggacggccgcgaggacgaggtcttcagcctcatcggccccaagcgc
tacgacgccccctggaaggacctggagaaccagggctggatcgccccggcgatctgcacc
gaggtgcgcctgaccctcaacgccggtgagcgcatggcctacgcgaccgccgagcccgag
gagcgctaccgcctggcggcctgctcaccgcgcaagctgccgatcatcgacgccctcctg
gcccgccacgagggcgagtcggccctggtcatcggccagtacgtggaccagctcatcgag
atcgccgagcacctgggcgcccccgtcatcaccggctcgacgacggtgcgcgagcgccag
cgcctctacgacgccttccgctgcggggagatccgcacgcttgtggtctccaaggtcgcg
aacttctccatcgacctgcccggggccagcgtagccgtccaggtctcgggctccttcggc
tcacgccaggaggaggcccagcggctcgggcggatcgtgcgccccaaggaggacggccgc
caggctcacttctacacggtcgtcgcccgcgacaccgccgaccaggagtacgcggcccac
cgccagcgcttcctggccgagcagggctacgcctacaccatcatcgacgccgaggacctc
tga
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